RNA–Protein interactions for RNA: ENST00000495537.1

KCTD3-205, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 1 (best)

Gene KCTD3, Length 2,722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-205ENST00000495537 CUX1P39880 1505 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 MSNP26038 577 aaKnown RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 LINC01559Q495D7 138 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 DHX37Q8IY37 1157 aaKnown RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 TBC1D32Q96NH3 1257 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 DNAJC2Q99543 621 aaKnown RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 GZF1Q9H116 711 aaPredicted RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 YY1AP1Q9H869 796 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 RTEL1-TNFRSF6BF6WH68 1400 aa4.1□□□□□ -1.75
KCTD3-205ENST00000495537 BLMP54132 1417 aaPredicted RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 THOC2Q8NI27 1593 aaKnown RBP4.1□□□□□ -1.75
KCTD3-205ENST00000495537 TULP2O00295 520 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 SKOR2Q2VWA4 1001 aaPredicted RBP4.09□□□□□ -1.75
KCTD3-205ENST00000495537 MYRIPQ8NFW9 859 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 TLL2Q9Y6L7 1015 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 EIF3AQ14152 1382 aaKnown RBP4.09□□□□□ -1.75
KCTD3-205ENST00000495537 NINLQ9Y2I6 1382 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 FMN1Q68DA7 1419 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 HSP90AB1P08238 724 aaKnown RBP4.09□□□□□ -1.75
KCTD3-205ENST00000495537 PTMSP20962 102 aa4.09□□□□□ -1.75
KCTD3-205ENST00000495537 RBM25P49756 843 aaKnown RBP4.09□□□□□ -1.75
KCTD3-205ENST00000495537 WDR4P57081 412 aaKnown RBP4.09□□□□□ -1.75
KCTD3-205ENST00000495537 PTPRKQ15262 1439 aa4.09□□□□□ -1.76
KCTD3-205ENST00000495537 UPP2O95045 317 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 VSIG8P0DPA2 414 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 CTHP32929 405 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 VEGFBP49765 207 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 TTLL12Q14166 644 aaPredicted RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 ATP2B3Q16720 1220 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 DNTTIP2Q5QJE6 756 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 ZKSCAN5Q9Y2L8 839 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 PRDM2Q13029 1718 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 MAPK8IP3Q9UPT6 1336 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 FGD6Q6ZV73 1430 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 RPRD2Q5VT52 1461 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 MOXD2PA6NHM9 499 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 TIMP2P16035 220 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 NASPP49321 788 aaPredicted RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 NBPF1Q3BBV0 1214 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 CLEC17AQ6ZS10 378 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 PRIMPOLQ96LW4 560 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 PURBQ96QR8 312 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 GEMIN8Q9NWZ8 242 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 KDM2AQ9Y2K7 1162 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 KDM5CP41229 1560 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 MBD5Q9P267 1494 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 NDUFV2P19404 249 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 CDK11BP21127 795 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 HMGN5P82970 282 aaKnown RBP4.08□□□□□ -1.76
KCTD3-205ENST00000495537 NR5A1Q13285 461 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 LYPD8Q6UX82 237 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 TMC1Q8TDI8 760 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 CDK15Q96Q40 435 aa4.08□□□□□ -1.76
KCTD3-205ENST00000495537 MYBBP1AQ9BQG0 1328 aaKnown RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 KIF15Q9NS87 1388 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 CFAP65Q6ZU64 1925 aaKnown RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 CLGNO14967 610 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 PLIN1O60240 522 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 GABPB1Q06547 395 aaPredicted RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 C20orf194Q5TEA3 1177 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 CGNQ9P2M7 1197 aaKnown RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 PCF11O94913 1555 aaKnown RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 SHROOM2Q13796 1616 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 SPTLC1O15269 473 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 MAN1A2O60476 641 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 ZNF445P59923 1031 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 CBX1P83916 185 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 XPCQ01831 940 aaPredicted RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 FAM50AQ14320 339 aaKnown RBP4.07□□□□□ -1.76
KCTD3-205ENST00000495537 RALBP1Q15311 655 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 AMHR2Q16671 573 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 ARMC2Q8NEN0 867 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 FEZ1Q99689 392 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 TSPYL1Q9H0U9 437 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 PANK3Q9H999 370 aa4.07□□□□□ -1.76
KCTD3-205ENST00000495537 CLASP1Q7Z460 1538 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 FAM193AP78312 1265 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 AXDND1Q5T1B0 1012 aaPredicted RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 L3MBTL2Q969R5 705 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 ZBTB3Q9H5J0 574 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 SLC52A1Q9NWF4 448 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 ZIC2O95409 532 aaPredicted RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 CAPN2P17655 700 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 ARID5BQ14865 1188 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 GAPVD1Q14C86 1478 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 KIF14Q15058 1648 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 AGERQ15109 404 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 NBPF8Q3BBV2 869 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 PRPF38BQ5VTL8 546 aaKnown RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 BPHLQ86WA6 291 aaPredicted RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 PARD3Q8TEW0 1356 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 ANKRD7Q92527 254 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 FYCO1Q9BQS8 1478 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 BEGAINQ9BUH8 593 aa4.06□□□□□ -1.76
KCTD3-205ENST00000495537 KLF16Q9BXK1 252 aaPredicted RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 ZNF608Q9ULD9 1512 aaPredicted RBP4.06□□□□□ -1.76
KCTD3-205ENST00000495537 NPC1L1Q9UHC9 1359 aa4.05□□□□□ -1.76
KCTD3-205ENST00000495537 RAB3GAP1Q15042 981 aa4.05□□□□□ -1.76
KCTD3-205ENST00000495537 KLHL40Q2TBA0 621 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms