RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-204ENST00000494467 ZNF428Q96B54 188 aa12.03□□□□□ -0.48
ABCA1-204ENST00000494467 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
ABCA1-204ENST00000494467 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
ABCA1-204ENST00000494467 FANCIQ9NVI1 1328 aa12.03□□□□□ -0.48
ABCA1-204ENST00000494467 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
ABCA1-204ENST00000494467 DCTN1Q14203 1278 aa12.02□□□□□ -0.49
ABCA1-204ENST00000494467 THUMPD2Q9BTF0 503 aaKnown RBP12.02□□□□□ -0.49
ABCA1-204ENST00000494467 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
ABCA1-204ENST00000494467 FAM98CQ17RN3 349 aaKnown RBP12.01□□□□□ -0.49
ABCA1-204ENST00000494467 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
ABCA1-204ENST00000494467 MARCH10Q8NA82 808 aaPredicted RBP12.01□□□□□ -0.49
ABCA1-204ENST00000494467 MBIPQ9NS73 344 aa12.01□□□□□ -0.49
ABCA1-204ENST00000494467 KAT6BQ8WYB5 2073 aa12□□□□□ -0.49
ABCA1-204ENST00000494467 TEFQ10587 303 aa12□□□□□ -0.49
ABCA1-204ENST00000494467 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
ABCA1-204ENST00000494467 RNF123Q5XPI4 1314 aa12□□□□□ -0.49
ABCA1-204ENST00000494467 LAMB4A4D0S4 1761 aa12□□□□□ -0.49
ABCA1-204ENST00000494467 SENP3-EIF4A1A0A087X0R7 540 aa11.99□□□□□ -0.49
ABCA1-204ENST00000494467 HOXB7P09629 217 aa11.99□□□□□ -0.49
ABCA1-204ENST00000494467 BRPF1P55201 1214 aaPredicted RBP11.99□□□□□ -0.49
ABCA1-204ENST00000494467 KCPQ6ZWJ8 1503 aa11.98□□□□□ -0.49
ABCA1-204ENST00000494467 DDX54Q8TDD1 881 aaKnown RBP11.98□□□□□ -0.49
ABCA1-204ENST00000494467 SEPT12Q8IYM1 358 aa11.97□□□□□ -0.49
ABCA1-204ENST00000494467 NFATC2IPQ8NCF5 419 aa11.97□□□□□ -0.49
ABCA1-204ENST00000494467 CHMP4AQ9BY43 222 aa11.97□□□□□ -0.49
ABCA1-204ENST00000494467 BTAF1O14981 1849 aa11.97□□□□□ -0.49
ABCA1-204ENST00000494467 LY75O60449 1722 aa11.97□□□□□ -0.49
ABCA1-204ENST00000494467 BTBD11A6QL63 1104 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 VAMP4O75379 141 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 RXRBP28702 533 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 CABP4P57796 275 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 EIF4A1P60842 406 aaKnown RBP11.96□□□□□ -0.49
ABCA1-204ENST00000494467 EXOSC9Q06265 439 aaKnown RBP11.96□□□□□ -0.49
ABCA1-204ENST00000494467 ALDH1L2Q3SY69 923 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 ZNF790Q6PG37 636 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
ABCA1-204ENST00000494467 TSPYL4Q9UJ04 414 aa11.96□□□□□ -0.49
ABCA1-204ENST00000494467 C5P01031 1676 aa11.96□□□□□ -0.5
ABCA1-204ENST00000494467 RGPD3A6NKT7 1758 aaPredicted RBP11.95□□□□□ -0.5
ABCA1-204ENST00000494467 RGPD4Q7Z3J3 1758 aa11.95□□□□□ -0.5
ABCA1-204ENST00000494467 RCAN3Q9UKA8 241 aa11.95□□□□□ -0.5
ABCA1-204ENST00000494467 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 C8orf58Q8NAV2 365 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 PIGBQ92521 554 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 RGS12O14924 1447 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 RREB1Q92766 1687 aa11.94□□□□□ -0.5
ABCA1-204ENST00000494467 GIGYF1O75420 1035 aaPredicted RBP11.93□□□□□ -0.5
ABCA1-204ENST00000494467 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
ABCA1-204ENST00000494467 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
ABCA1-204ENST00000494467 COL5A3P25940 1745 aaPredicted RBP11.93□□□□□ -0.5
ABCA1-204ENST00000494467 TJP1Q07157 1748 aa11.93□□□□□ -0.5
ABCA1-204ENST00000494467 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
ABCA1-204ENST00000494467 FAM196AQ6ZSG2 479 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 KRT27Q7Z3Y8 459 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 TSPYL6Q8N831 410 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 MIS18AQ9NYP9 233 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 LAS1LQ9Y4W2 734 aaKnown RBP11.92□□□□□ -0.5
ABCA1-204ENST00000494467 TAF1LQ8IZX4 1826 aa11.92□□□□□ -0.5
ABCA1-204ENST00000494467 KCNQ3O43525 872 aa11.91□□□□□ -0.5
ABCA1-204ENST00000494467 PRIM1P49642 420 aaKnown RBP11.91□□□□□ -0.5
ABCA1-204ENST00000494467 FMNL2Q96PY5 1086 aa11.91□□□□□ -0.5
ABCA1-204ENST00000494467 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
ABCA1-204ENST00000494467 ERBB4Q15303 1308 aa11.9□□□□□ -0.5
ABCA1-204ENST00000494467 SMARCC1Q92922 1105 aaPredicted RBP11.9□□□□□ -0.5
ABCA1-204ENST00000494467 ZNF496Q96IT1 587 aaPredicted RBP11.9□□□□□ -0.5
ABCA1-204ENST00000494467 TEX13AQ9BXU3 409 aaPredicted RBP11.9□□□□□ -0.5
ABCA1-204ENST00000494467 SNRPA1P09661 255 aaKnown RBP11.89□□□□□ -0.51
ABCA1-204ENST00000494467 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
ABCA1-204ENST00000494467 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
ABCA1-204ENST00000494467 TTC5Q8N0Z6 440 aa11.89□□□□□ -0.51
ABCA1-204ENST00000494467 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
ABCA1-204ENST00000494467 ARHGAP45Q92619 1136 aa11.89□□□□□ -0.51
ABCA1-204ENST00000494467 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
ABCA1-204ENST00000494467 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
ABCA1-204ENST00000494467 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
ABCA1-204ENST00000494467 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
ABCA1-204ENST00000494467 MYH14Q7Z406 1995 aaKnown RBP11.87□□□□□ -0.51
ABCA1-204ENST00000494467 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
ABCA1-204ENST00000494467 MRPL50Q8N5N7 158 aaKnown RBP11.87□□□□□ -0.51
ABCA1-204ENST00000494467 IBTKQ9P2D0 1353 aaPredicted RBP11.87□□□□□ -0.51
ABCA1-204ENST00000494467 A0A0G2JS52 829 aa11.86□□□□□ -0.51
ABCA1-204ENST00000494467 KCNQ2O43526 872 aa11.86□□□□□ -0.51
ABCA1-204ENST00000494467 RRP1P56182 461 aaKnown RBP11.86□□□□□ -0.51
ABCA1-204ENST00000494467 MYT1Q01538 1121 aa11.86□□□□□ -0.51
ABCA1-204ENST00000494467 PDE3AQ14432 1141 aa11.86□□□□□ -0.51
ABCA1-204ENST00000494467 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
ABCA1-204ENST00000494467 PTPRCP08575 1304 aa11.86□□□□□ -0.51
ABCA1-204ENST00000494467 PALLDQ8WX93 1383 aa11.85□□□□□ -0.51
ABCA1-204ENST00000494467 BCAR3O75815 825 aa11.85□□□□□ -0.51
ABCA1-204ENST00000494467 HDGFL1Q5TGJ6 251 aa11.85□□□□□ -0.51
ABCA1-204ENST00000494467 LRP10Q7Z4F1 713 aa11.85□□□□□ -0.51
ABCA1-204ENST00000494467 SLC4A9Q96Q91 983 aa11.85□□□□□ -0.51
ABCA1-204ENST00000494467 DBF4Q9UBU7 674 aaPredicted RBP11.85□□□□□ -0.51
ABCA1-204ENST00000494467 SUPT16HQ9Y5B9 1047 aaKnown RBP11.85□□□□□ -0.51
ABCA1-204ENST00000494467 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
ABCA1-204ENST00000494467 PLSCR1O15162 318 aa11.84□□□□□ -0.51
ABCA1-204ENST00000494467 IPO8O15397 1037 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms