RNA–Protein interactions for RNA: ENST00000494422.1

BRD9-211, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-211ENST00000494422 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.05
BRD9-211ENST00000494422 RGPD2P0DJD1 1756 aa8.46□□□□□ -1.05
BRD9-211ENST00000494422 MEGF6O75095 1541 aa8.46□□□□□ -1.05
BRD9-211ENST00000494422 HTATSF1O43719 755 aaKnown RBP8.46□□□□□ -1.06
BRD9-211ENST00000494422 FAM196AQ6ZSG2 479 aa8.46□□□□□ -1.06
BRD9-211ENST00000494422 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
BRD9-211ENST00000494422 MAPK8IP3Q9UPT6 1336 aa8.46□□□□□ -1.06
BRD9-211ENST00000494422 POTEJP0CG39 1038 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 LMOD3Q0VAK6 560 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 NKX1-1Q15270 411 aaPredicted RBP8.45□□□□□ -1.06
BRD9-211ENST00000494422 AKAP4Q5JQC9 854 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 USHBP1Q8N6Y0 703 aa8.45□□□□□ -1.06
BRD9-211ENST00000494422 PNISRQ8TF01 805 aaKnown RBP8.45□□□□□ -1.06
BRD9-211ENST00000494422 HMOX1P09601 288 aa8.44□□□□□ -1.06
BRD9-211ENST00000494422 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
BRD9-211ENST00000494422 RUNDC1Q96C34 613 aa8.44□□□□□ -1.06
BRD9-211ENST00000494422 PLEKHF1Q96S99 279 aa8.44□□□□□ -1.06
BRD9-211ENST00000494422 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
BRD9-211ENST00000494422 POTEMA6NI47 508 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 SPDYE4A6NLX3 237 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 PHKG2P15735 406 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 AEBP1Q8IUX7 1158 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 FBXO3Q9UK99 471 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 ADAMTS8Q9UP79 889 aa8.43□□□□□ -1.06
BRD9-211ENST00000494422 GNAT3A8MTJ3 354 aa8.42□□□□□ -1.06
BRD9-211ENST00000494422 ERVV-2B6SEH9 535 aa8.42□□□□□ -1.06
BRD9-211ENST00000494422 ZNF530Q6P9A1 599 aaPredicted RBP8.42□□□□□ -1.06
BRD9-211ENST00000494422 MARCH10Q8NA82 808 aaPredicted RBP8.42□□□□□ -1.06
BRD9-211ENST00000494422 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
BRD9-211ENST00000494422 RTF1Q92541 710 aaKnown RBP8.42□□□□□ -1.06
BRD9-211ENST00000494422 BRWD3Q6RI45 1802 aa8.41□□□□□ -1.06
BRD9-211ENST00000494422 SHANK3Q9BYB0 1731 aa8.41□□□□□ -1.06
BRD9-211ENST00000494422 MAP3K5Q99683 1374 aa8.41□□□□□ -1.06
BRD9-211ENST00000494422 CYP27B1O15528 508 aa8.41□□□□□ -1.06
BRD9-211ENST00000494422 CALD1Q05682 793 aaKnown RBP8.41□□□□□ -1.06
BRD9-211ENST00000494422 NFE2L2Q16236 605 aa8.41□□□□□ -1.06
BRD9-211ENST00000494422 MTHFSDQ2M296 383 aaKnown RBP8.41□□□□□ -1.06
BRD9-211ENST00000494422 ASTLQ6HA08 431 aaPredicted RBP8.41□□□□□ -1.06
BRD9-211ENST00000494422 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
BRD9-211ENST00000494422 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.06
BRD9-211ENST00000494422 POTEGQ6S5H5 508 aa8.4□□□□□ -1.06
BRD9-211ENST00000494422 MIER1Q8N108 512 aa8.4□□□□□ -1.06
BRD9-211ENST00000494422 BCL11BQ9C0K0 894 aaPredicted RBP8.4□□□□□ -1.06
BRD9-211ENST00000494422 TMPOP42166 694 aaKnown RBP8.39□□□□□ -1.07
BRD9-211ENST00000494422 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
BRD9-211ENST00000494422 CCDC184Q52MB2 194 aa8.39□□□□□ -1.07
BRD9-211ENST00000494422 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
BRD9-211ENST00000494422 MS4A3Q96HJ5 214 aa8.39□□□□□ -1.07
BRD9-211ENST00000494422 BABAM1Q9NWV8 329 aa8.39□□□□□ -1.07
BRD9-211ENST00000494422 ADAMTS7Q9UKP4 1686 aa8.39□□□□□ -1.07
BRD9-211ENST00000494422 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 NHSQ6T4R5 1651 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 PLSCR1O15162 318 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
BRD9-211ENST00000494422 ATMINO43313 823 aaPredicted RBP8.38□□□□□ -1.07
BRD9-211ENST00000494422 RIPK4P57078 832 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 FAM9BQ8IZU0 186 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 SMARCC1Q92922 1105 aaPredicted RBP8.38□□□□□ -1.07
BRD9-211ENST00000494422 PHACTR3Q96KR7 559 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 TMOD3Q9NYL9 352 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 MRC1P22897 1456 aa8.38□□□□□ -1.07
BRD9-211ENST00000494422 BAG6P46379 1132 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 CABP4P57796 275 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 TEFQ10587 303 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 LCE2DQ5TA82 110 aaPredicted RBP8.37□□□□□ -1.07
BRD9-211ENST00000494422 SLC52A2Q9HAB3 445 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 RGPD3A6NKT7 1758 aaPredicted RBP8.37□□□□□ -1.07
BRD9-211ENST00000494422 RGPD4Q7Z3J3 1758 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 SCN11AQ9UI33 1791 aa8.37□□□□□ -1.07
BRD9-211ENST00000494422 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
BRD9-211ENST00000494422 SBF2Q86WG5 1849 aa8.36□□□□□ -1.07
BRD9-211ENST00000494422 APAF1O14727 1248 aa8.36□□□□□ -1.07
BRD9-211ENST00000494422 MPRIPQ6WCQ1 1025 aa8.36□□□□□ -1.07
BRD9-211ENST00000494422 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
BRD9-211ENST00000494422 CHMP4AQ9BY43 222 aa8.36□□□□□ -1.07
BRD9-211ENST00000494422 IL16Q14005 1332 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 DOT1LQ8TEK3 1739 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 TRIM37O94972 964 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
BRD9-211ENST00000494422 NBR1Q14596 966 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 TAF7Q15545 349 aaPredicted RBP8.35□□□□□ -1.07
BRD9-211ENST00000494422 SLC27A3Q5K4L6 730 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 WDR63Q8IWG1 891 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 IL17REQ8NFR9 667 aa8.35□□□□□ -1.07
BRD9-211ENST00000494422 ILDR2Q71H61 639 aa8.34□□□□□ -1.07
BRD9-211ENST00000494422 TTC5Q8N0Z6 440 aa8.34□□□□□ -1.07
BRD9-211ENST00000494422 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
BRD9-211ENST00000494422 SYTL4Q96C24 671 aaPredicted RBP8.34□□□□□ -1.07
BRD9-211ENST00000494422 ACSBG1Q96GR2 724 aa8.34□□□□□ -1.07
BRD9-211ENST00000494422 CFAP44Q96MT7 982 aa8.34□□□□□ -1.07
BRD9-211ENST00000494422 DLG5Q8TDM6 1919 aa8.34□□□□□ -1.07
BRD9-211ENST00000494422 ZNF831Q5JPB2 1677 aa8.34□□□□□ -1.08
BRD9-211ENST00000494422 ITGB4P16144 1822 aa8.33□□□□□ -1.08
BRD9-211ENST00000494422 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
BRD9-211ENST00000494422 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms