RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 MRC1P22897 1456 aa25.53■■□□□ 1.68
PCMT1-209ENST00000494411 NFATC2IPQ8NCF5 419 aa25.53■■□□□ 1.68
PCMT1-209ENST00000494411 LGR6Q9HBX8 967 aa25.53■■□□□ 1.68
PCMT1-209ENST00000494411 GAS2L2Q8NHY3 880 aa25.52■■□□□ 1.68
PCMT1-209ENST00000494411 PHACTR3Q96KR7 559 aa25.52■■□□□ 1.68
PCMT1-209ENST00000494411 PNPLA7Q6ZV29 1317 aa25.52■■□□□ 1.68
PCMT1-209ENST00000494411 RNMTO43148 476 aaKnown RBP25.51■■□□□ 1.67
PCMT1-209ENST00000494411 MAP3K5Q99683 1374 aa25.51■■□□□ 1.67
PCMT1-209ENST00000494411 ZNF831Q5JPB2 1677 aa25.51■■□□□ 1.67
PCMT1-209ENST00000494411 ITPK1Q13572 414 aa25.49■■□□□ 1.67
PCMT1-209ENST00000494411 SLC52A2Q9HAB3 445 aa25.49■■□□□ 1.67
PCMT1-209ENST00000494411 ATF5Q9Y2D1 282 aaPredicted RBP25.49■■□□□ 1.67
PCMT1-209ENST00000494411 UBR3Q6ZT12 1888 aa25.49■■□□□ 1.67
PCMT1-209ENST00000494411 MYBBP1AQ9BQG0 1328 aaKnown RBP25.48■■□□□ 1.67
PCMT1-209ENST00000494411 FCHSD2O94868 740 aa25.48■■□□□ 1.67
PCMT1-209ENST00000494411 HMGB2P26583 209 aaKnown RBP25.48■■□□□ 1.67
PCMT1-209ENST00000494411 ATP6V1AP38606 617 aa25.48■■□□□ 1.67
PCMT1-209ENST00000494411 LINC00116Q8NCU8 138 aa25.48■■□□□ 1.67
PCMT1-209ENST00000494411 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
PCMT1-209ENST00000494411 COL5A3P25940 1745 aaPredicted RBP25.47■■□□□ 1.67
PCMT1-209ENST00000494411 GNAT3A8MTJ3 354 aa25.47■■□□□ 1.67
PCMT1-209ENST00000494411 RBM42Q9BTD8 480 aaKnown RBP25.47■■□□□ 1.67
PCMT1-209ENST00000494411 SLC4A9Q96Q91 983 aa25.46■■□□□ 1.67
PCMT1-209ENST00000494411 PTGER2P43116 358 aa25.45■■□□□ 1.66
PCMT1-209ENST00000494411 AK7Q96M32 723 aa25.45■■□□□ 1.66
PCMT1-209ENST00000494411 PPP1R1BQ9UD71 204 aaPredicted RBP25.45■■□□□ 1.66
PCMT1-209ENST00000494411 SIPA1L3O60292 1781 aaPredicted RBP25.45■■□□□ 1.66
PCMT1-209ENST00000494411 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
PCMT1-209ENST00000494411 TJP1Q07157 1748 aa25.43■■□□□ 1.66
PCMT1-209ENST00000494411 PTCD1O75127 700 aaKnown RBP25.43■■□□□ 1.66
PCMT1-209ENST00000494411 COL23A1Q86Y22 540 aaPredicted RBP25.43■■□□□ 1.66
PCMT1-209ENST00000494411 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
PCMT1-209ENST00000494411 CICQ96RK0 1608 aaPredicted RBP25.42■■□□□ 1.66
PCMT1-209ENST00000494411 AMIGO3Q86WK7 504 aa25.42■■□□□ 1.66
PCMT1-209ENST00000494411 IL17REQ8NFR9 667 aa25.42■■□□□ 1.66
PCMT1-209ENST00000494411 SLC16A10Q8TF71 515 aa25.42■■□□□ 1.66
PCMT1-209ENST00000494411 PRKRIP1Q9H875 184 aaPredicted RBP25.42■■□□□ 1.66
PCMT1-209ENST00000494411 MSH5O43196 834 aa25.41■■□□□ 1.66
PCMT1-209ENST00000494411 UBR2Q8IWV8 1755 aa25.41■■□□□ 1.66
PCMT1-209ENST00000494411 DLG5Q8TDM6 1919 aa25.4■■□□□ 1.66
PCMT1-209ENST00000494411 SLC39A6Q13433 755 aa25.4■■□□□ 1.66
PCMT1-209ENST00000494411 SGIP1Q9BQI5 828 aa25.4■■□□□ 1.66
PCMT1-209ENST00000494411 KCPQ6ZWJ8 1503 aa25.4■■□□□ 1.66
PCMT1-209ENST00000494411 MYH14Q7Z406 1995 aaKnown RBP25.39■■□□□ 1.66
PCMT1-209ENST00000494411 SMIM5Q71RC9 77 aa25.39■■□□□ 1.66
PCMT1-209ENST00000494411 CEMIPQ8WUJ3 1361 aa25.39■■□□□ 1.65
PCMT1-209ENST00000494411 GNPATO15228 680 aa25.38■■□□□ 1.65
PCMT1-209ENST00000494411 PHF14O94880 888 aa25.38■■□□□ 1.65
PCMT1-209ENST00000494411 TEFQ10587 303 aa25.38■■□□□ 1.65
PCMT1-209ENST00000494411 FLAD1Q8NFF5 587 aa25.38■■□□□ 1.65
PCMT1-209ENST00000494411 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.36■■□□□ 1.65
PCMT1-209ENST00000494411 NEFMP07197 916 aa25.36■■□□□ 1.65
PCMT1-209ENST00000494411 PLEKHF1Q96S99 279 aa25.36■■□□□ 1.65
PCMT1-209ENST00000494411 SSFA2P28290 1259 aa25.35■■□□□ 1.65
PCMT1-209ENST00000494411 CNTNAP4Q9C0A0 1308 aa25.35■■□□□ 1.65
PCMT1-209ENST00000494411 RTF1Q92541 710 aaKnown RBP25.34■■□□□ 1.65
PCMT1-209ENST00000494411 MSL1Q68DK7 614 aa25.33■■□□□ 1.65
PCMT1-209ENST00000494411 MCM10Q7L590 875 aa25.33■■□□□ 1.65
PCMT1-209ENST00000494411 MAPK8IP3Q9UPT6 1336 aa25.33■■□□□ 1.64
PCMT1-209ENST00000494411 POLD1P28340 1107 aa25.32■■□□□ 1.64
PCMT1-209ENST00000494411 RC3H1Q5TC82 1133 aaKnown RBP25.32■■□□□ 1.64
PCMT1-209ENST00000494411 TTC5Q8N0Z6 440 aa25.32■■□□□ 1.64
PCMT1-209ENST00000494411 ARXQ96QS3 562 aa25.32■■□□□ 1.64
PCMT1-209ENST00000494411 PNNQ9H307 717 aaKnown RBP25.32■■□□□ 1.64
PCMT1-209ENST00000494411 DCTN1Q14203 1278 aa25.31■■□□□ 1.64
PCMT1-209ENST00000494411 DNAJC10Q8IXB1 793 aa25.31■■□□□ 1.64
PCMT1-209ENST00000494411 C4AP0C0L4 1744 aa25.3■■□□□ 1.64
PCMT1-209ENST00000494411 HTATSF1O43719 755 aaKnown RBP25.3■■□□□ 1.64
PCMT1-209ENST00000494411 CRKLP46109 303 aaKnown RBP25.3■■□□□ 1.64
PCMT1-209ENST00000494411 RTCBQ9Y3I0 505 aaKnown RBP25.3■■□□□ 1.64
PCMT1-209ENST00000494411 NFE2L2Q16236 605 aa25.29■■□□□ 1.64
PCMT1-209ENST00000494411 ZNF790Q6PG37 636 aa25.29■■□□□ 1.64
PCMT1-209ENST00000494411 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
PCMT1-209ENST00000494411 FHDC1Q9C0D6 1143 aaPredicted RBP25.28■■□□□ 1.64
PCMT1-209ENST00000494411 BTBD11A6QL63 1104 aa25.27■■□□□ 1.64
PCMT1-209ENST00000494411 RPS6KA4O75676 772 aa25.27■■□□□ 1.64
PCMT1-209ENST00000494411 TRAPPC3LQ5T215 181 aa25.26■■□□□ 1.63
PCMT1-209ENST00000494411 VSIG10Q8N0Z9 540 aa25.26■■□□□ 1.63
PCMT1-209ENST00000494411 ZNF496Q96IT1 587 aaPredicted RBP25.26■■□□□ 1.63
PCMT1-209ENST00000494411 KCNQ3O43525 872 aa25.25■■□□□ 1.63
PCMT1-209ENST00000494411 CYP19A1P11511 503 aaPredicted RBP25.25■■□□□ 1.63
PCMT1-209ENST00000494411 ADRA2BP18089 450 aa25.25■■□□□ 1.63
PCMT1-209ENST00000494411 INTS5Q6P9B9 1019 aaKnown RBP25.25■■□□□ 1.63
PCMT1-209ENST00000494411 HEG1Q9ULI3 1381 aa25.24■■□□□ 1.63
PCMT1-209ENST00000494411 CCDC146Q8IYE0 955 aa25.24■■□□□ 1.63
PCMT1-209ENST00000494411 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
PCMT1-209ENST00000494411 ARHGEF1Q92888 912 aaKnown RBP25.23■■□□□ 1.63
PCMT1-209ENST00000494411 SYT17Q9BSW7 474 aa25.23■■□□□ 1.63
PCMT1-209ENST00000494411 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
PCMT1-209ENST00000494411 FMNL2Q96PY5 1086 aa25.22■■□□□ 1.63
PCMT1-209ENST00000494411 ADAMTS8Q9UP79 889 aa25.22■■□□□ 1.63
PCMT1-209ENST00000494411 KDM3BQ7LBC6 1761 aa25.21■■□□□ 1.63
PCMT1-209ENST00000494411 RFC4P35249 363 aa25.21■■□□□ 1.63
PCMT1-209ENST00000494411 THUMPD2Q9BTF0 503 aaKnown RBP25.21■■□□□ 1.63
PCMT1-209ENST00000494411 TAF7Q15545 349 aaPredicted RBP25.2■■□□□ 1.62
PCMT1-209ENST00000494411 RIPK4P57078 832 aa25.19■■□□□ 1.62
PCMT1-209ENST00000494411 ZBTB1Q9Y2K1 713 aa25.19■■□□□ 1.62
PCMT1-209ENST00000494411 SOS1Q07889 1333 aaPredicted RBP25.18■■□□□ 1.62
PCMT1-209ENST00000494411 STARD3NLO95772 234 aa25.18■■□□□ 1.62
PCMT1-209ENST00000494411 TMPOP42166 694 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms