RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 CDK19Q9BWU1 502 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 KIAA0232Q92628 1395 aa8.75□□□□□ -1.01
EPHA3-203ENST00000494014 XPCQ01831 940 aaPredicted RBP8.74□□□□□ -1.01
EPHA3-203ENST00000494014 PRDM10Q9NQV6 1147 aa8.74□□□□□ -1.01
EPHA3-203ENST00000494014 RBM25P49756 843 aaKnown RBP8.74□□□□□ -1.01
EPHA3-203ENST00000494014 BCL11BQ9C0K0 894 aaPredicted RBP8.74□□□□□ -1.01
EPHA3-203ENST00000494014 NAP1L2Q9ULW6 460 aaPredicted RBP8.74□□□□□ -1.01
EPHA3-203ENST00000494014 ACEP12821 1306 aa8.74□□□□□ -1.01
EPHA3-203ENST00000494014 BAG6P46379 1132 aa8.74□□□□□ -1.01
EPHA3-203ENST00000494014 IPO4Q8TEX9 1081 aaKnown RBP8.74□□□□□ -1.01
EPHA3-203ENST00000494014 MINK1Q8N4C8 1332 aaPredicted RBP8.73□□□□□ -1.01
EPHA3-203ENST00000494014 FAM196AQ6ZSG2 479 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 CDCA7Q9BWT1 371 aaPredicted RBP8.73□□□□□ -1.01
EPHA3-203ENST00000494014 PANK3Q9H999 370 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 BTG4Q9NY30 223 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 COG6Q9Y2V7 657 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 HSP90AB1P08238 724 aaKnown RBP8.73□□□□□ -1.01
EPHA3-203ENST00000494014 PPP2R1AP30153 589 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 MFAP1P55081 439 aaKnown RBP8.73□□□□□ -1.01
EPHA3-203ENST00000494014 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
EPHA3-203ENST00000494014 CD163L1Q9NR16 1453 aa8.72□□□□□ -1.01
EPHA3-203ENST00000494014 LTN1O94822 1766 aa8.72□□□□□ -1.01
EPHA3-203ENST00000494014 HMGN5P82970 282 aaKnown RBP8.72□□□□□ -1.01
EPHA3-203ENST00000494014 SF3B2Q13435 895 aaKnown RBP8.72□□□□□ -1.01
EPHA3-203ENST00000494014 NGDNQ8NEJ9 315 aaKnown RBP8.72□□□□□ -1.01
EPHA3-203ENST00000494014 MYRIPQ8NFW9 859 aa8.72□□□□□ -1.01
EPHA3-203ENST00000494014 PRIMPOLQ96LW4 560 aa8.72□□□□□ -1.01
EPHA3-203ENST00000494014 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.72□□□□□ -1.01
EPHA3-203ENST00000494014 DDX49Q9Y6V7 483 aaKnown RBP8.72□□□□□ -1.01
EPHA3-203ENST00000494014 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 OVOS2A0A0J9YW53 1432 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 OVOS2Q6IE36 1432 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 RGPD5Q99666 1765 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 TMF1P82094 1093 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 CAMKK2Q96RR4 588 aa8.71□□□□□ -1.01
EPHA3-203ENST00000494014 EVC2Q86UK5 1308 aa8.71□□□□□ -1.02
EPHA3-203ENST00000494014 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
EPHA3-203ENST00000494014 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
EPHA3-203ENST00000494014 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
EPHA3-203ENST00000494014 HAP1P54257 671 aaPredicted RBP8.7□□□□□ -1.02
EPHA3-203ENST00000494014 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
EPHA3-203ENST00000494014 TCP11L2Q8N4U5 519 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 PRDM11Q9NQV5 511 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 KDM2AQ9Y2K7 1162 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 NPC1L1Q9UHC9 1359 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 TNS2Q63HR2 1409 aa8.7□□□□□ -1.02
EPHA3-203ENST00000494014 NUTM2FA1L443 756 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 PCDHB15Q9Y5E8 787 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 KCNH5Q8NCM2 988 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 TESK2Q96S53 571 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 EDC4Q6P2E9 1401 aaKnown RBP8.69□□□□□ -1.02
EPHA3-203ENST00000494014 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-203ENST00000494014 ARID3AQ99856 593 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 SPINK5Q9NQ38 1064 aaPredicted RBP8.69□□□□□ -1.02
EPHA3-203ENST00000494014 TMEM51Q9NW97 253 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
EPHA3-203ENST00000494014 KIAA2012Q0VF49 1180 aa8.68□□□□□ -1.02
EPHA3-203ENST00000494014 PLSCR1O15162 318 aa8.68□□□□□ -1.02
EPHA3-203ENST00000494014 BAG4O95429 457 aaKnown RBP8.68□□□□□ -1.02
EPHA3-203ENST00000494014 LY75O60449 1722 aa8.68□□□□□ -1.02
EPHA3-203ENST00000494014 K7ELQ4 463 aaPredicted RBP8.67□□□□□ -1.02
EPHA3-203ENST00000494014 APAF1O14727 1248 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 GCP02774 474 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 FAM98CQ17RN3 349 aaKnown RBP8.67□□□□□ -1.02
EPHA3-203ENST00000494014 WDR17Q8IZU2 1322 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 ZSCAN23Q3MJ62 389 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
EPHA3-203ENST00000494014 NUCB2P80303 420 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 CARD10Q9BWT7 1032 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 KIF20BQ96Q89 1820 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 MAP3K5Q99683 1374 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 CBX1P83916 185 aa8.66□□□□□ -1.02
EPHA3-203ENST00000494014 SAFB2Q14151 953 aaKnown RBP eCLIP8.66□□□□□ -1.02
EPHA3-203ENST00000494014 CHMP4BQ9H444 224 aaKnown RBP8.66□□□□□ -1.02
EPHA3-203ENST00000494014 RTL1A6NKG5 1358 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 KIF24Q5T7B8 1368 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 CDK11BP21127 795 aaKnown RBP8.65□□□□□ -1.02
EPHA3-203ENST00000494014 SSFA2P28290 1259 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 RARSP54136 660 aaKnown RBP8.65□□□□□ -1.02
EPHA3-203ENST00000494014 ZNF831Q5JPB2 1677 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 KIF16BQ96L93 1317 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 HDAC1Q13547 482 aaPredicted RBP8.65□□□□□ -1.02
EPHA3-203ENST00000494014 ABTB2Q8N961 1025 aa8.65□□□□□ -1.02
EPHA3-203ENST00000494014 NCAPD2Q15021 1401 aa8.65□□□□□ -1.03
EPHA3-203ENST00000494014 CDCA8Q53HL2 280 aa8.65□□□□□ -1.03
EPHA3-203ENST00000494014 DNTTIP2Q5QJE6 756 aaKnown RBP8.65□□□□□ -1.03
EPHA3-203ENST00000494014 CAVIN1Q6NZI2 390 aaKnown RBP8.65□□□□□ -1.03
EPHA3-203ENST00000494014 CCDC146Q8IYE0 955 aa8.65□□□□□ -1.03
EPHA3-203ENST00000494014 ZNF710Q8N1W2 664 aa8.65□□□□□ -1.03
EPHA3-203ENST00000494014 KIF3AQ9Y496 699 aa8.65□□□□□ -1.03
EPHA3-203ENST00000494014 BTAF1O14981 1849 aa8.64□□□□□ -1.03
EPHA3-203ENST00000494014 MVPQ14764 893 aaKnown RBP8.64□□□□□ -1.03
EPHA3-203ENST00000494014 LRSAM1Q6UWE0 723 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms