RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	UBR2	Q8IWV8	1755 aa		13.21	□□□□□ -0.29
MACF1-222	ENST00000494012	CIC	Q96RK0	1608 aa	Predicted RBP	13.21	□□□□□ -0.3
MACF1-222	ENST00000494012	CEMIP	Q8WUJ3	1361 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	QSER1	Q2KHR3	1735 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	TEF	Q10587	303 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	NFE2L2	Q16236	605 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	PROM2	Q8N271	834 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	NFATC2IP	Q8NCF5	419 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	RUNDC1	Q96C34	613 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	LGR6	Q9HBX8	967 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	CCNL1	Q9UK58	526 aa	Predicted RBP	13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	ADAMTS8	Q9UP79	889 aa		13.2	□□□□□ -0.3
MACF1-222	ENST00000494012	LMOD3	Q0VAK6	560 aa		13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	IL17RE	Q8NFR9	667 aa		13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	ATG3	Q9NT62	314 aa		13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	ASAP1	Q9ULH1	1129 aa		13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	C4B	P0C0L5	1744 aa		13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	COL5A3	P25940	1745 aa	Predicted RBP	13.18	□□□□□ -0.3
MACF1-222	ENST00000494012	LOC102724428	A0A0B4J2F2	783 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	SIK1	P57059	783 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	CCDC184	Q52MB2	194 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	CCDC146	Q8IYE0	955 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	STK32B	Q9NY57	414 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	TUBGCP6	Q96RT7	1819 aa		13.17	□□□□□ -0.3
MACF1-222	ENST00000494012	TJP1	Q07157	1748 aa		13.16	□□□□□ -0.3
MACF1-222	ENST00000494012	DIEXF	Q68CQ4	756 aa	Known RBP	13.16	□□□□□ -0.3
MACF1-222	ENST00000494012	MCM10	Q7L590	875 aa		13.16	□□□□□ -0.3
MACF1-222	ENST00000494012	PNISR	Q8TF01	805 aa	Known RBP	13.16	□□□□□ -0.3
MACF1-222	ENST00000494012	LRRC4B	Q9NT99	713 aa		13.16	□□□□□ -0.3
MACF1-222	ENST00000494012	KDM3B	Q7LBC6	1761 aa		13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	KCP	Q6ZWJ8	1503 aa		13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	TMPO	P42166	694 aa	Known RBP	13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	RIPK4	P57078	832 aa		13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	R3HDM1	Q15032	1099 aa	Known RBP	13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	TTC5	Q8N0Z6	440 aa		13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	RBM42	Q9BTD8	480 aa	Known RBP	13.15	□□□□□ -0.3
MACF1-222	ENST00000494012	CASZ1	Q86V15	1759 aa		13.15	□□□□□ -0.31
MACF1-222	ENST00000494012	ATP6V1A	P38606	617 aa		13.14	□□□□□ -0.31
MACF1-222	ENST00000494012	SLC15A2	Q16348	729 aa		13.14	□□□□□ -0.31
MACF1-222	ENST00000494012	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.14	□□□□□ -0.31
MACF1-222	ENST00000494012	UBR3	Q6ZT12	1888 aa		13.14	□□□□□ -0.31
MACF1-222	ENST00000494012	PSD	A5PKW4	1024 aa	Predicted RBP	13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	BTBD11	A6QL63	1104 aa		13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	CCER2	I3L3R5	266 aa		13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	PTCD1	O75127	700 aa	Known RBP	13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	KCNQ4	P56696	695 aa		13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	DCTN1	Q14203	1278 aa		13.13	□□□□□ -0.31
MACF1-222	ENST00000494012	ZNF790	Q6PG37	636 aa		13.12	□□□□□ -0.31
MACF1-222	ENST00000494012	AKT1S1	Q96B36	256 aa		13.12	□□□□□ -0.31
MACF1-222	ENST00000494012	RRP7A	Q9Y3A4	280 aa	Known RBP	13.12	□□□□□ -0.31
MACF1-222	ENST00000494012	SLC39A6	Q13433	755 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	TAF7	Q15545	349 aa	Predicted RBP	13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	NEUROD2	Q15784	382 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	ZNF827	Q17R98	1081 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	VSIG10	Q8N0Z9	540 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	AK7	Q96M32	723 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	TFCP2L1	Q9NZI6	479 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	LAMB4	A4D0S4	1761 aa		13.11	□□□□□ -0.31
MACF1-222	ENST00000494012	LRP5	O75197	1615 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	APAF1	O14727	1248 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	ITPK1	Q13572	414 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	FAM9B	Q8IZU0	186 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	LINC00116	Q8NCU8	138 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	FMNL2	Q96PY5	1086 aa		13.1	□□□□□ -0.31
MACF1-222	ENST00000494012	CALD1	Q05682	793 aa	Known RBP	13.09	□□□□□ -0.31
MACF1-222	ENST00000494012	FLAD1	Q8NFF5	587 aa		13.09	□□□□□ -0.31
MACF1-222	ENST00000494012	SLC4A9	Q96Q91	983 aa		13.09	□□□□□ -0.31
MACF1-222	ENST00000494012	THUMPD2	Q9BTF0	503 aa	Known RBP	13.09	□□□□□ -0.31
MACF1-222	ENST00000494012	CNTNAP4	Q9C0A0	1308 aa		13.09	□□□□□ -0.31
MACF1-222	ENST00000494012	HEG1	Q9ULI3	1381 aa		13.08	□□□□□ -0.31
MACF1-222	ENST00000494012	ZNF496	Q96IT1	587 aa	Predicted RBP	13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	BABAM1	Q9NWV8	329 aa		13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	TRIM35	Q9UPQ4	493 aa		13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	MYH14	Q7Z406	1995 aa	Known RBP	13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	C4A	P0C0L4	1744 aa		13.08	□□□□□ -0.32
MACF1-222	ENST00000494012	GNPAT	O15228	680 aa		13.07	□□□□□ -0.32
MACF1-222	ENST00000494012	NCBP3	Q53F19	620 aa	Known RBP	13.07	□□□□□ -0.32
MACF1-222	ENST00000494012	RC3H1	Q5TC82	1133 aa	Known RBP	13.07	□□□□□ -0.32
MACF1-222	ENST00000494012	PNPLA7	Q6ZV29	1317 aa		13.07	□□□□□ -0.32
MACF1-222	ENST00000494012	STARD3NL	O95772	234 aa		13.06	□□□□□ -0.32
MACF1-222	ENST00000494012	SSFA2	P28290	1259 aa		13.06	□□□□□ -0.32
MACF1-222	ENST00000494012	CCDC27	Q2M243	656 aa		13.06	□□□□□ -0.32
MACF1-222	ENST00000494012	DNAJC10	Q8IXB1	793 aa		13.06	□□□□□ -0.32
MACF1-222	ENST00000494012	TSPYL4	Q9UJ04	414 aa		13.06	□□□□□ -0.32
MACF1-222	ENST00000494012	COL24A1	Q17RW2	1714 aa		13.05	□□□□□ -0.32
MACF1-222	ENST00000494012	CRKL	P46109	303 aa	Known RBP	13.05	□□□□□ -0.32
MACF1-222	ENST00000494012	NGEF	Q8N5V2	710 aa		13.05	□□□□□ -0.32
MACF1-222	ENST00000494012	SLC16A10	Q8TF71	515 aa		13.05	□□□□□ -0.32
MACF1-222	ENST00000494012	RTCB	Q9Y3I0	505 aa	Known RBP	13.05	□□□□□ -0.32
MACF1-222	ENST00000494012	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	MSH5	O43196	834 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	KCNQ3	O43525	872 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	PHF14	O94880	888 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	SNRPA1	P09661	255 aa	Known RBP	13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	CYP19A1	P11511	503 aa	Predicted RBP	13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	ADRA2B	P18089	450 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	MIER1	Q8N108	512 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	MTFR1L	Q9H019	292 aa		13.04	□□□□□ -0.32
MACF1-222	ENST00000494012	CCDC87	Q9NVE4	849 aa		13.04	□□□□□ -0.32

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