RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 RALBP1Q15311 655 aa15.66■□□□□ 0.1
UBA3-211ENST00000493957 ZNF530Q6P9A1 599 aaPredicted RBP15.66■□□□□ 0.1
UBA3-211ENST00000493957 KDM6AO15550 1401 aaPredicted RBP15.66■□□□□ 0.1
UBA3-211ENST00000493957 TUBGCP6Q96RT7 1819 aa15.66■□□□□ 0.1
UBA3-211ENST00000493957 PLEKHG2Q9H7P9 1386 aa15.65■□□□□ 0.1
UBA3-211ENST00000493957 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
UBA3-211ENST00000493957 PRR29P0C7W0 189 aa15.65■□□□□ 0.1
UBA3-211ENST00000493957 PLEKHO1Q53GL0 409 aaPredicted RBP15.65■□□□□ 0.1
UBA3-211ENST00000493957 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
UBA3-211ENST00000493957 NKX1-1Q15270 411 aaPredicted RBP15.64■□□□□ 0.09
UBA3-211ENST00000493957 IFNL2Q8IZJ0 200 aa15.64■□□□□ 0.09
UBA3-211ENST00000493957 PROM2Q8N271 834 aa15.64■□□□□ 0.09
UBA3-211ENST00000493957 PRKRIP1Q9H875 184 aaPredicted RBP15.64■□□□□ 0.09
UBA3-211ENST00000493957 MYBBP1AQ9BQG0 1328 aaKnown RBP15.64■□□□□ 0.09
UBA3-211ENST00000493957 PLSCR1O15162 318 aa15.63■□□□□ 0.09
UBA3-211ENST00000493957 RSPH6AQ9H0K4 717 aa15.63■□□□□ 0.09
UBA3-211ENST00000493957 PLSCR2Q9NRY7 297 aa15.63■□□□□ 0.09
UBA3-211ENST00000493957 SIPA1L3O60292 1781 aaPredicted RBP15.62■□□□□ 0.09
UBA3-211ENST00000493957 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
UBA3-211ENST00000493957 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
UBA3-211ENST00000493957 MTHFSDQ2M296 383 aaKnown RBP15.62■□□□□ 0.09
UBA3-211ENST00000493957 AMOTQ4VCS5 1084 aa15.62■□□□□ 0.09
UBA3-211ENST00000493957 C5P01031 1676 aa15.61■□□□□ 0.09
UBA3-211ENST00000493957 PRKAR2BP31323 418 aa15.61■□□□□ 0.09
UBA3-211ENST00000493957 MPRIPQ6WCQ1 1025 aa15.61■□□□□ 0.09
UBA3-211ENST00000493957 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
UBA3-211ENST00000493957 PSDA5PKW4 1024 aaPredicted RBP15.6■□□□□ 0.09
UBA3-211ENST00000493957 KCNQ4P56696 695 aa15.6■□□□□ 0.09
UBA3-211ENST00000493957 TXNRD1Q16881 649 aa15.6■□□□□ 0.09
UBA3-211ENST00000493957 PIGBQ92521 554 aa15.6■□□□□ 0.09
UBA3-211ENST00000493957 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
UBA3-211ENST00000493957 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
UBA3-211ENST00000493957 ANO8Q9HCE9 1232 aaPredicted RBP15.59■□□□□ 0.09
UBA3-211ENST00000493957 CD44P16070 742 aaKnown RBP15.58■□□□□ 0.08
UBA3-211ENST00000493957 DCAF5Q96JK2 942 aa15.58■□□□□ 0.08
UBA3-211ENST00000493957 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.08
UBA3-211ENST00000493957 CASZ1Q86V15 1759 aa15.57■□□□□ 0.08
UBA3-211ENST00000493957 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
UBA3-211ENST00000493957 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
UBA3-211ENST00000493957 LGR6Q9HBX8 967 aa15.57■□□□□ 0.08
UBA3-211ENST00000493957 MRC1P22897 1456 aa15.57■□□□□ 0.08
UBA3-211ENST00000493957 CCDC184Q52MB2 194 aa15.56■□□□□ 0.08
UBA3-211ENST00000493957 TMOD3Q9NYL9 352 aa15.56■□□□□ 0.08
UBA3-211ENST00000493957 ASAP1Q9ULH1 1129 aa15.56■□□□□ 0.08
UBA3-211ENST00000493957 PALLDQ8WX93 1383 aa15.56■□□□□ 0.08
UBA3-211ENST00000493957 QSER1Q2KHR3 1735 aa15.56■□□□□ 0.08
UBA3-211ENST00000493957 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
UBA3-211ENST00000493957 COL5A3P25940 1745 aaPredicted RBP15.55■□□□□ 0.08
UBA3-211ENST00000493957 MAP3K5Q99683 1374 aa15.55■□□□□ 0.08
UBA3-211ENST00000493957 FCHSD2O94868 740 aa15.55■□□□□ 0.08
UBA3-211ENST00000493957 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
UBA3-211ENST00000493957 TJP1Q07157 1748 aa15.54■□□□□ 0.08
UBA3-211ENST00000493957 ERVV-2B6SEH9 535 aa15.54■□□□□ 0.08
UBA3-211ENST00000493957 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
UBA3-211ENST00000493957 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
UBA3-211ENST00000493957 C4BP0C0L5 1744 aa15.54■□□□□ 0.08
UBA3-211ENST00000493957 MYH14Q7Z406 1995 aaKnown RBP15.53■□□□□ 0.08
UBA3-211ENST00000493957 CABP4P57796 275 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 PLEKHF1Q96S99 279 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 ATG3Q9NT62 314 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 ZNF831Q5JPB2 1677 aa15.53■□□□□ 0.08
UBA3-211ENST00000493957 NFATC2IPQ8NCF5 419 aa15.52■□□□□ 0.08
UBA3-211ENST00000493957 CCNL1Q9UK58 526 aaPredicted RBP15.52■□□□□ 0.08
UBA3-211ENST00000493957 IL17REQ8NFR9 667 aa15.51■□□□□ 0.07
UBA3-211ENST00000493957 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
UBA3-211ENST00000493957 GNAT3A8MTJ3 354 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 ANP32CO43423 234 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 CLCN6P51797 869 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 SLC27A3Q5K4L6 730 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 NBPF14Q5TI25 921 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 CCDC146Q8IYE0 955 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 SLC52A2Q9HAB3 445 aa15.5■□□□□ 0.07
UBA3-211ENST00000493957 CICQ96RK0 1608 aaPredicted RBP15.5■□□□□ 0.07
UBA3-211ENST00000493957 KCPQ6ZWJ8 1503 aa15.49■□□□□ 0.07
UBA3-211ENST00000493957 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
UBA3-211ENST00000493957 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
UBA3-211ENST00000493957 SLC4A9Q96Q91 983 aa15.49■□□□□ 0.07
UBA3-211ENST00000493957 STK32BQ9NY57 414 aa15.49■□□□□ 0.07
UBA3-211ENST00000493957 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
UBA3-211ENST00000493957 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
UBA3-211ENST00000493957 LRP5O75197 1615 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 SIK1P57059 783 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 SLC39A6Q13433 755 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 ITPK1Q13572 414 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 SLC15A2Q16348 729 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 MCM10Q7L590 875 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
UBA3-211ENST00000493957 KDM3BQ7LBC6 1761 aa15.47■□□□□ 0.07
UBA3-211ENST00000493957 WDR43Q15061 677 aaKnown RBP eCLIP15.47■□□□□ 0.07
UBA3-211ENST00000493957 LINC00116Q8NCU8 138 aa15.47■□□□□ 0.07
UBA3-211ENST00000493957 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
UBA3-211ENST00000493957 SMIM5Q71RC9 77 aa15.46■□□□□ 0.07
UBA3-211ENST00000493957 MAPK8IP3Q9UPT6 1336 aa15.45■□□□□ 0.06
UBA3-211ENST00000493957 PTCD1O75127 700 aaKnown RBP15.45■□□□□ 0.06
UBA3-211ENST00000493957 AMIGO3Q86WK7 504 aa15.45■□□□□ 0.06
UBA3-211ENST00000493957 THUMPD2Q9BTF0 503 aaKnown RBP15.45■□□□□ 0.06
UBA3-211ENST00000493957 RRP7AQ9Y3A4 280 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms