RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
HDAC6-234ENST00000493923 SUPT16HQ9Y5B9 1047 aaKnown RBP11.11□□□□□ -0.63
HDAC6-234ENST00000493923 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
HDAC6-234ENST00000493923 PHKG2P15735 406 aa11.1□□□□□ -0.63
HDAC6-234ENST00000493923 YY1P25490 414 aa11.1□□□□□ -0.63
HDAC6-234ENST00000493923 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
HDAC6-234ENST00000493923 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
HDAC6-234ENST00000493923 UBR3Q6ZT12 1888 aa11.09□□□□□ -0.63
HDAC6-234ENST00000493923 NLGN2Q8NFZ4 835 aa11.09□□□□□ -0.63
HDAC6-234ENST00000493923 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
HDAC6-234ENST00000493923 C4BP0C0L5 1744 aa11.09□□□□□ -0.63
HDAC6-234ENST00000493923 ITPK1Q13572 414 aa11.08□□□□□ -0.64
HDAC6-234ENST00000493923 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
HDAC6-234ENST00000493923 MORC1Q86VD1 984 aa11.08□□□□□ -0.64
HDAC6-234ENST00000493923 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
HDAC6-234ENST00000493923 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
HDAC6-234ENST00000493923 MAP3K5Q99683 1374 aa11.07□□□□□ -0.64
HDAC6-234ENST00000493923 POTEHQ6S545 545 aa11.07□□□□□ -0.64
HDAC6-234ENST00000493923 KLHL34Q8N239 644 aa11.07□□□□□ -0.64
HDAC6-234ENST00000493923 SLC16A10Q8TF71 515 aa11.07□□□□□ -0.64
HDAC6-234ENST00000493923 SPG7Q9UQ90 795 aa11.07□□□□□ -0.64
HDAC6-234ENST00000493923 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
HDAC6-234ENST00000493923 YTHDC1Q96MU7 727 aaKnown RBP11.06□□□□□ -0.64
HDAC6-234ENST00000493923 ATG3Q9NT62 314 aa11.06□□□□□ -0.64
HDAC6-234ENST00000493923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.06□□□□□ -0.641e-16■■□□□ 11.7
HDAC6-234ENST00000493923 CHD4Q14839 1912 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
HDAC6-234ENST00000493923 IL13P35225 146 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 SIK1P57059 783 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 ERICH6BQ5W0A0 696 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
HDAC6-234ENST00000493923 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
HDAC6-234ENST00000493923 PHF14O94880 888 aa11.04□□□□□ -0.64
HDAC6-234ENST00000493923 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-234ENST00000493923 SMARCC1Q92922 1105 aaPredicted RBP11.04□□□□□ -0.64
HDAC6-234ENST00000493923 TMOD3Q9NYL9 352 aa11.04□□□□□ -0.64
HDAC6-234ENST00000493923 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
HDAC6-234ENST00000493923 KDRP35968 1356 aa11.03□□□□□ -0.64
HDAC6-234ENST00000493923 YBX3P16989 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC6-234ENST00000493923 POLD1P28340 1107 aa11.03□□□□□ -0.64
HDAC6-234ENST00000493923 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
HDAC6-234ENST00000493923 SULT6B1Q6IMI4 303 aa11.03□□□□□ -0.64
HDAC6-234ENST00000493923 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
HDAC6-234ENST00000493923 AK7Q96M32 723 aa11.02□□□□□ -0.65
HDAC6-234ENST00000493923 COL5A3P25940 1745 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-234ENST00000493923 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
HDAC6-234ENST00000493923 MTHFSP49914 203 aa11.01□□□□□ -0.65
HDAC6-234ENST00000493923 PLEKHO1Q53GL0 409 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-234ENST00000493923 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
HDAC6-234ENST00000493923 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-234ENST00000493923 SCN11AQ9UI33 1791 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 VIRMAQ69YN4 1812 aaKnown RBP11□□□□□ -0.65
HDAC6-234ENST00000493923 ERVV-2B6SEH9 535 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 GNPATO15228 680 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 HMOX1P09601 288 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 GPR162Q16538 588 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 MIER1Q8N108 512 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 WWC3Q9ULE0 1092 aa11□□□□□ -0.65
HDAC6-234ENST00000493923 COL3A1P02461 1466 aaPredicted RBP11□□□□□ -0.65
HDAC6-234ENST00000493923 TJP1Q07157 1748 aa10.99□□□□□ -0.65
HDAC6-234ENST00000493923 DCAF5Q96JK2 942 aa10.99□□□□□ -0.65
HDAC6-234ENST00000493923 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
HDAC6-234ENST00000493923 CABP4P57796 275 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 FLAD1Q8NFF5 587 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 ZBTB12Q9Y330 459 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-234ENST00000493923 PLEKHG2Q9H7P9 1386 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 ZNF831Q5JPB2 1677 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 KIAA1551Q9HCM1 1747 aa10.98□□□□□ -0.65
HDAC6-234ENST00000493923 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
HDAC6-234ENST00000493923 SSFA2P28290 1259 aa10.97□□□□□ -0.65
HDAC6-234ENST00000493923 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
HDAC6-234ENST00000493923 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
HDAC6-234ENST00000493923 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
HDAC6-234ENST00000493923 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.65
HDAC6-234ENST00000493923 ADAMTS7Q9UKP4 1686 aa10.95□□□□□ -0.66
HDAC6-234ENST00000493923 RNMTO43148 476 aaKnown RBP10.95□□□□□ -0.66
HDAC6-234ENST00000493923 HSP90AB1P08238 724 aaKnown RBP10.95□□□□□ -0.66
HDAC6-234ENST00000493923 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
HDAC6-234ENST00000493923 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
HDAC6-234ENST00000493923 SRP68Q9UHB9 627 aaKnown RBP10.95□□□□□ -0.66
HDAC6-234ENST00000493923 CD2APQ9Y5K6 639 aa10.95□□□□□ -0.66
HDAC6-234ENST00000493923 N4BP2Q86UW6 1770 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-234ENST00000493923 MRC1P22897 1456 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 CNTNAP4Q9C0A0 1308 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 ZBTB22O15209 634 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 MMP10P09238 476 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 GYS1P13807 737 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 CRKLP46109 303 aaKnown RBP10.94□□□□□ -0.66
HDAC6-234ENST00000493923 AKAP4Q5JQC9 854 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 RC3H1Q5TC82 1133 aaKnown RBP10.94□□□□□ -0.66
HDAC6-234ENST00000493923 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 CICQ96RK0 1608 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-234ENST00000493923 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
HDAC6-234ENST00000493923 KIF13BQ9NQT8 1826 aa10.93□□□□□ -0.66
HDAC6-234ENST00000493923 NPC1L1Q9UHC9 1359 aa10.93□□□□□ -0.66
HDAC6-234ENST00000493923 DIAPH1O60610 1272 aaKnown RBP10.93□□□□□ -0.66
HDAC6-234ENST00000493923 RPS6KA4O75676 772 aa10.93□□□□□ -0.66
HDAC6-234ENST00000493923 INTS5Q6P9B9 1019 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms