RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 NHSQ6T4R5 1651 aa9.92□□□□□ -0.82
VEGFA-214ENST00000493786 MRC1P22897 1456 aa9.91□□□□□ -0.82
VEGFA-214ENST00000493786 WWC1Q8IX03 1113 aa9.91□□□□□ -0.82
VEGFA-214ENST00000493786 SCN11AQ9UI33 1791 aa9.91□□□□□ -0.82
VEGFA-214ENST00000493786 KAT6BQ8WYB5 2073 aa9.91□□□□□ -0.82
VEGFA-214ENST00000493786 HMGB2P26583 209 aaKnown RBP9.9□□□□□ -0.82
VEGFA-214ENST00000493786 GNAI1P63096 354 aa9.9□□□□□ -0.82
VEGFA-214ENST00000493786 WDR63Q8IWG1 891 aa9.9□□□□□ -0.82
VEGFA-214ENST00000493786 BABAM1Q9NWV8 329 aa9.9□□□□□ -0.82
VEGFA-214ENST00000493786 TSPYL4Q9UJ04 414 aa9.9□□□□□ -0.82
VEGFA-214ENST00000493786 TOGARAM1Q9Y4F4 1720 aa9.9□□□□□ -0.83
VEGFA-214ENST00000493786 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.83
VEGFA-214ENST00000493786 DLG5Q8TDM6 1919 aa9.9□□□□□ -0.83
VEGFA-214ENST00000493786 PALLDQ8WX93 1383 aa9.89□□□□□ -0.83
VEGFA-214ENST00000493786 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
VEGFA-214ENST00000493786 CFAP44Q96MT7 982 aa9.89□□□□□ -0.83
VEGFA-214ENST00000493786 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
VEGFA-214ENST00000493786 ATG3Q9NT62 314 aa9.89□□□□□ -0.83
VEGFA-214ENST00000493786 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
VEGFA-214ENST00000493786 ASAP1Q9ULH1 1129 aa9.89□□□□□ -0.83
VEGFA-214ENST00000493786 IL16Q14005 1332 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 PLSCR1O15162 318 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 SLC39A6Q13433 755 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 ZNF790Q6PG37 636 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 PTF1AQ7RTS3 328 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 MYH16Q9H6N6 1097 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 SBF2Q86WG5 1849 aa9.88□□□□□ -0.83
VEGFA-214ENST00000493786 ITGB4P16144 1822 aa9.87□□□□□ -0.83
VEGFA-214ENST00000493786 PTCD1O75127 700 aaKnown RBP9.87□□□□□ -0.83
VEGFA-214ENST00000493786 SLC27A3Q5K4L6 730 aa9.87□□□□□ -0.83
VEGFA-214ENST00000493786 YTHDC1Q96MU7 727 aaKnown RBP9.87□□□□□ -0.83
VEGFA-214ENST00000493786 FMNL2Q96PY5 1086 aa9.87□□□□□ -0.83
VEGFA-214ENST00000493786 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
VEGFA-214ENST00000493786 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
VEGFA-214ENST00000493786 BTAF1O14981 1849 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 LOC102724428A0A0B4J2F2 783 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 E9PSI1 815 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 CHL1O00533 1208 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 SIK1P57059 783 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
VEGFA-214ENST00000493786 MBIPQ9NS73 344 aa9.86□□□□□ -0.83
VEGFA-214ENST00000493786 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
VEGFA-214ENST00000493786 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
VEGFA-214ENST00000493786 VIRMAQ69YN4 1812 aaKnown RBP9.85□□□□□ -0.83
VEGFA-214ENST00000493786 ATP6V1AP38606 617 aa9.85□□□□□ -0.83
VEGFA-214ENST00000493786 TXNRD1Q16881 649 aa9.85□□□□□ -0.83
VEGFA-214ENST00000493786 DEFB132Q7Z7B7 95 aa9.85□□□□□ -0.83
VEGFA-214ENST00000493786 VSIG10Q8N0Z9 540 aa9.85□□□□□ -0.83
VEGFA-214ENST00000493786 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
VEGFA-214ENST00000493786 KCNQ3O43525 872 aa9.84□□□□□ -0.83
VEGFA-214ENST00000493786 SNRPA1P09661 255 aaKnown RBP9.84□□□□□ -0.83
VEGFA-214ENST00000493786 ZNF853P0CG23 659 aa9.84□□□□□ -0.83
VEGFA-214ENST00000493786 EIF4A1P60842 406 aaKnown RBP9.84□□□□□ -0.83
VEGFA-214ENST00000493786 EZH2Q15910 746 aaKnown RBP9.84□□□□□ -0.83
VEGFA-214ENST00000493786 TSR2Q969E8 191 aaKnown RBP9.84□□□□□ -0.83
VEGFA-214ENST00000493786 ZNF496Q96IT1 587 aaPredicted RBP9.84□□□□□ -0.83
VEGFA-214ENST00000493786 CAMKK2Q96RR4 588 aa9.84□□□□□ -0.83
VEGFA-214ENST00000493786 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
VEGFA-214ENST00000493786 HEG1Q9ULI3 1381 aa9.84□□□□□ -0.83
VEGFA-214ENST00000493786 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 SIPA1L3O60292 1781 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-214ENST00000493786 PAPPAQ13219 1627 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 SOCS7O14512 581 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 STARD3NLO95772 234 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
VEGFA-214ENST00000493786 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
VEGFA-214ENST00000493786 KCPQ6ZWJ8 1503 aa9.82□□□□□ -0.84
VEGFA-214ENST00000493786 SLFN5Q08AF3 891 aa9.82□□□□□ -0.84
VEGFA-214ENST00000493786 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
VEGFA-214ENST00000493786 AK7Q96M32 723 aa9.82□□□□□ -0.84
VEGFA-214ENST00000493786 SOS1Q07889 1333 aaPredicted RBP9.82□□□□□ -0.84
VEGFA-214ENST00000493786 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
VEGFA-214ENST00000493786 HOXB7P09629 217 aa9.81□□□□□ -0.84
VEGFA-214ENST00000493786 KCNQ4P56696 695 aa9.81□□□□□ -0.84
VEGFA-214ENST00000493786 DUSP27Q5VZP5 1158 aa9.81□□□□□ -0.84
VEGFA-214ENST00000493786 DNAJC10Q8IXB1 793 aa9.81□□□□□ -0.84
VEGFA-214ENST00000493786 STK32BQ9NY57 414 aa9.81□□□□□ -0.84
VEGFA-214ENST00000493786 KDM3BQ7LBC6 1761 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 LY75O60449 1722 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 ELL2O00472 640 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-214ENST00000493786 EIF2S2P20042 333 aaKnown RBP9.8□□□□□ -0.84
VEGFA-214ENST00000493786 ITPK1Q13572 414 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-214ENST00000493786 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 PROM2Q8N271 834 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
VEGFA-214ENST00000493786 LRRC4BQ9NT99 713 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 UBR2Q8IWV8 1755 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 CNTNAP4Q9C0A0 1308 aa9.8□□□□□ -0.84
VEGFA-214ENST00000493786 CYP19A1P11511 503 aaPredicted RBP9.79□□□□□ -0.84
VEGFA-214ENST00000493786 CRKLP46109 303 aaKnown RBP9.79□□□□□ -0.84
VEGFA-214ENST00000493786 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
VEGFA-214ENST00000493786 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
VEGFA-214ENST00000493786 CCDC87Q9NVE4 849 aa9.79□□□□□ -0.84
VEGFA-214ENST00000493786 TFCP2L1Q9NZI6 479 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms