RNA–Protein interactions for RNA: ENST00000492947.1

AGRN-209, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 690 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-209ENST00000492947 FOXD4L1Q9NU39 408 aa22.84■■□□□ 1.25
AGRN-209ENST00000492947 HMGB2P26583 209 aaKnown RBP22.83■■□□□ 1.25
AGRN-209ENST00000492947 ITPK1Q13572 414 aa22.83■■□□□ 1.25
AGRN-209ENST00000492947 SULT6B1Q6IMI4 303 aa22.83■■□□□ 1.25
AGRN-209ENST00000492947 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
AGRN-209ENST00000492947 DCAF5Q96JK2 942 aa22.83■■□□□ 1.25
AGRN-209ENST00000492947 SLC4A9Q96Q91 983 aa22.83■■□□□ 1.25
AGRN-209ENST00000492947 COL3A1P02461 1466 aaPredicted RBP22.8■■□□□ 1.24
AGRN-209ENST00000492947 GOLGB1Q14789 3259 aaKnown RBP22.8■■□□□ 1.24
AGRN-209ENST00000492947 HSP90AB1P08238 724 aaKnown RBP22.8■■□□□ 1.24
AGRN-209ENST00000492947 ZNF530Q6P9A1 599 aaPredicted RBP22.8■■□□□ 1.24
AGRN-209ENST00000492947 UBR3Q6ZT12 1888 aa22.79■■□□□ 1.24
AGRN-209ENST00000492947 ZNF831Q5JPB2 1677 aa22.79■■□□□ 1.24
AGRN-209ENST00000492947 CNGB1Q14028 1251 aaPredicted RBP22.79■■□□□ 1.24
AGRN-209ENST00000492947 SMIM5Q71RC9 77 aa22.79■■□□□ 1.24
AGRN-209ENST00000492947 ZEB1P37275 1124 aaPredicted RBP22.78■■□□□ 1.24
AGRN-209ENST00000492947 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
AGRN-209ENST00000492947 POLD1P28340 1107 aa22.77■■□□□ 1.24
AGRN-209ENST00000492947 DIAPH1O60610 1272 aaKnown RBP22.75■■□□□ 1.23
AGRN-209ENST00000492947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
AGRN-209ENST00000492947 SSFA2P28290 1259 aa22.74■■□□□ 1.23
AGRN-209ENST00000492947 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
AGRN-209ENST00000492947 AK7Q96M32 723 aa22.74■■□□□ 1.23
AGRN-209ENST00000492947 YY1P25490 414 aa22.73■■□□□ 1.23
AGRN-209ENST00000492947 MSL1Q68DK7 614 aa22.73■■□□□ 1.23
AGRN-209ENST00000492947 NLGN2Q8NFZ4 835 aa22.73■■□□□ 1.23
AGRN-209ENST00000492947 CFAP53Q96M91 514 aa22.73■■□□□ 1.23
AGRN-209ENST00000492947 ADAMTS7Q9UKP4 1686 aa22.72■■□□□ 1.23
AGRN-209ENST00000492947 HMOX1P09601 288 aa22.72■■□□□ 1.23
AGRN-209ENST00000492947 CABP4P57796 275 aa22.72■■□□□ 1.23
AGRN-209ENST00000492947 NFATC2IPQ8NCF5 419 aa22.72■■□□□ 1.23
AGRN-209ENST00000492947 AKAP4Q5JQC9 854 aa22.71■■□□□ 1.23
AGRN-209ENST00000492947 C1orf141Q5JVX7 400 aa22.71■■□□□ 1.23
AGRN-209ENST00000492947 COL5A3P25940 1745 aaPredicted RBP22.71■■□□□ 1.23
AGRN-209ENST00000492947 SCN11AQ9UI33 1791 aa22.71■■□□□ 1.23
AGRN-209ENST00000492947 DCAF8L1A6NGE4 600 aa22.7■■□□□ 1.22
AGRN-209ENST00000492947 LGR6Q9HBX8 967 aa22.7■■□□□ 1.22
AGRN-209ENST00000492947 MRC1P22897 1456 aa22.7■■□□□ 1.22
AGRN-209ENST00000492947 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
AGRN-209ENST00000492947 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
AGRN-209ENST00000492947 RC3H1Q5TC82 1133 aaKnown RBP22.69■■□□□ 1.22
AGRN-209ENST00000492947 GNPATO15228 680 aa22.68■■□□□ 1.22
AGRN-209ENST00000492947 PHF14O94880 888 aa22.68■■□□□ 1.22
AGRN-209ENST00000492947 CNTNAP4Q9C0A0 1308 aa22.67■■□□□ 1.22
AGRN-209ENST00000492947 NUDCQ9Y266 331 aa22.67■■□□□ 1.22
AGRN-209ENST00000492947 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
AGRN-209ENST00000492947 SLC52A2Q9HAB3 445 aa22.66■■□□□ 1.22
AGRN-209ENST00000492947 RNMTO43148 476 aaKnown RBP22.65■■□□□ 1.22
AGRN-209ENST00000492947 CD2APQ9Y5K6 639 aa22.65■■□□□ 1.22
AGRN-209ENST00000492947 MYH14Q7Z406 1995 aaKnown RBP22.65■■□□□ 1.22
AGRN-209ENST00000492947 U2SURPO15042 1029 aaKnown RBP22.64■■□□□ 1.21
AGRN-209ENST00000492947 TJP1Q07157 1748 aa22.64■■□□□ 1.21
AGRN-209ENST00000492947 PTCD1O75127 700 aaKnown RBP22.63■■□□□ 1.21
AGRN-209ENST00000492947 RPS6KA4O75676 772 aa22.62■■□□□ 1.21
AGRN-209ENST00000492947 PPP2R1AP30153 589 aa22.62■■□□□ 1.21
AGRN-209ENST00000492947 HOXD11P31277 338 aaPredicted RBP22.62■■□□□ 1.21
AGRN-209ENST00000492947 KLHL34Q8N239 644 aa22.62■■□□□ 1.21
AGRN-209ENST00000492947 YBX3P16989 372 aaKnown RBP eCLIP22.61■■□□□ 1.21
AGRN-209ENST00000492947 ARHGEF1Q92888 912 aaKnown RBP22.61■■□□□ 1.21
AGRN-209ENST00000492947 RTCBQ9Y3I0 505 aaKnown RBP22.61■■□□□ 1.21
AGRN-209ENST00000492947 KCPQ6ZWJ8 1503 aa22.61■■□□□ 1.21
AGRN-209ENST00000492947 TRAPPC3LQ5T215 181 aa22.6■■□□□ 1.21
AGRN-209ENST00000492947 GPR162Q16538 588 aa22.59■■□□□ 1.21
AGRN-209ENST00000492947 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
AGRN-209ENST00000492947 GYS1P13807 737 aa22.58■■□□□ 1.21
AGRN-209ENST00000492947 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
AGRN-209ENST00000492947 DDX10Q13206 875 aaKnown RBP22.58■■□□□ 1.21
AGRN-209ENST00000492947 RSPH6AQ9H0K4 717 aa22.58■■□□□ 1.21
AGRN-209ENST00000492947 VIRMAQ69YN4 1812 aaKnown RBP22.57■■□□□ 1.2
AGRN-209ENST00000492947 SLC39A6Q13433 755 aa22.57■■□□□ 1.2
AGRN-209ENST00000492947 IL17REQ8NFR9 667 aa22.57■■□□□ 1.2
AGRN-209ENST00000492947 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
AGRN-209ENST00000492947 CHD4Q14839 1912 aa22.57■■□□□ 1.2
AGRN-209ENST00000492947 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
AGRN-209ENST00000492947 RALBP1Q15311 655 aa22.56■■□□□ 1.2
AGRN-209ENST00000492947 ZNF784Q8NCA9 323 aaPredicted RBP22.56■■□□□ 1.2
AGRN-209ENST00000492947 MMP10P09238 476 aa22.55■■□□□ 1.2
AGRN-209ENST00000492947 GAS2L2Q8NHY3 880 aa22.55■■□□□ 1.2
AGRN-209ENST00000492947 CEMIPQ8WUJ3 1361 aa22.54■■□□□ 1.2
AGRN-209ENST00000492947 UBR2Q8IWV8 1755 aa22.54■■□□□ 1.2
AGRN-209ENST00000492947 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
AGRN-209ENST00000492947 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
AGRN-209ENST00000492947 U2AF1L5P0DN76 240 aaPredicted RBP22.53■■□□□ 1.2
AGRN-209ENST00000492947 CYP19A1P11511 503 aaPredicted RBP22.53■■□□□ 1.2
AGRN-209ENST00000492947 U2AF1Q01081 240 aaKnown RBP eCLIP22.53■■□□□ 1.2
AGRN-209ENST00000492947 KIAA1551Q9HCM1 1747 aa22.53■■□□□ 1.2
AGRN-209ENST00000492947 KIF13BQ9NQT8 1826 aa22.52■■□□□ 1.2
AGRN-209ENST00000492947 NEFMP07197 916 aa22.52■■□□□ 1.2
AGRN-209ENST00000492947 VSIG10Q8N0Z9 540 aa22.52■■□□□ 1.2
AGRN-209ENST00000492947 SIPA1L3O60292 1781 aaPredicted RBP22.52■■□□□ 1.2
AGRN-209ENST00000492947 GNAT3A8MTJ3 354 aa22.51■■□□□ 1.19
AGRN-209ENST00000492947 FCHSD2O94868 740 aa22.51■■□□□ 1.19
AGRN-209ENST00000492947 PRKAR2BP31323 418 aa22.51■■□□□ 1.19
AGRN-209ENST00000492947 USP42Q9H9J4 1324 aaKnown RBP22.51■■□□□ 1.19
AGRN-209ENST00000492947 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
AGRN-209ENST00000492947 GRIN3BO60391 1043 aa22.5■■□□□ 1.19
AGRN-209ENST00000492947 RFC4P35249 363 aa22.5■■□□□ 1.19
AGRN-209ENST00000492947 SRP68Q9UHB9 627 aaKnown RBP22.5■■□□□ 1.19
AGRN-209ENST00000492947 SOS1Q07889 1333 aaPredicted RBP22.5■■□□□ 1.19
AGRN-209ENST00000492947 PXDNLA1KZ92 1463 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms