RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 ONECUT3O60422 494 aaPredicted RBP28.49■■■□□ 2.15
PSPC1-204ENST00000492741 SEPT12Q8IYM1 358 aa28.49■■■□□ 2.15
PSPC1-204ENST00000492741 ADAMTS7Q9UKP4 1686 aa28.49■■■□□ 2.15
PSPC1-204ENST00000492741 RBM6P78332 1123 aaKnown RBP28.48■■■□□ 2.15
PSPC1-204ENST00000492741 ELL2O00472 640 aaPredicted RBP28.47■■■□□ 2.15
PSPC1-204ENST00000492741 ILDR1Q86SU0 546 aaPredicted RBP28.46■■■□□ 2.15
PSPC1-204ENST00000492741 TMOD3Q9NYL9 352 aa28.46■■■□□ 2.15
PSPC1-204ENST00000492741 SUPT16HQ9Y5B9 1047 aaKnown RBP28.46■■■□□ 2.15
PSPC1-204ENST00000492741 CT47B1P0C2W7 299 aaPredicted RBP28.45■■■□□ 2.14
PSPC1-204ENST00000492741 SYTL4Q96C24 671 aaPredicted RBP28.45■■■□□ 2.14
PSPC1-204ENST00000492741 THSD7AQ9UPZ6 1657 aa28.45■■■□□ 2.14
PSPC1-204ENST00000492741 C8orf58Q8NAV2 365 aa28.44■■■□□ 2.14
PSPC1-204ENST00000492741 RXRBP28702 533 aa28.43■■■□□ 2.14
PSPC1-204ENST00000492741 TWISTNBQ3B726 338 aaPredicted RBP28.43■■■□□ 2.14
PSPC1-204ENST00000492741 SLC39A6Q13433 755 aa28.43■■■□□ 2.14
PSPC1-204ENST00000492741 TSPYL6Q8N831 410 aa28.43■■■□□ 2.14
PSPC1-204ENST00000492741 MRC1P22897 1456 aa28.43■■■□□ 2.14
PSPC1-204ENST00000492741 KCNQ3O43525 872 aa28.42■■■□□ 2.14
PSPC1-204ENST00000492741 KRT24Q2M2I5 525 aa28.42■■■□□ 2.14
PSPC1-204ENST00000492741 TTC5Q8N0Z6 440 aa28.42■■■□□ 2.14
PSPC1-204ENST00000492741 ZNF790Q6PG37 636 aa28.41■■■□□ 2.14
PSPC1-204ENST00000492741 ACSBG1Q96GR2 724 aa28.4■■■□□ 2.14
PSPC1-204ENST00000492741 RGS17Q9UGC6 210 aaPredicted RBP28.4■■■□□ 2.14
PSPC1-204ENST00000492741 PRIM1P49642 420 aaKnown RBP28.4■■■□□ 2.14
PSPC1-204ENST00000492741 EIF4A1P60842 406 aaKnown RBP28.4■■■□□ 2.14
PSPC1-204ENST00000492741 SIPA1L3O60292 1781 aaPredicted RBP28.39■■■□□ 2.14
PSPC1-204ENST00000492741 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.13
PSPC1-204ENST00000492741 VAMP4O75379 141 aa28.38■■■□□ 2.13
PSPC1-204ENST00000492741 PIGBQ92521 554 aa28.38■■■□□ 2.13
PSPC1-204ENST00000492741 TOGARAM1Q9Y4F4 1720 aa28.37■■■□□ 2.13
PSPC1-204ENST00000492741 RARSP54136 660 aaKnown RBP28.37■■■□□ 2.13
PSPC1-204ENST00000492741 FAM182BQ5T319 152 aa28.37■■■□□ 2.13
PSPC1-204ENST00000492741 POTEAQ6S8J7 498 aa28.35■■■□□ 2.13
PSPC1-204ENST00000492741 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
PSPC1-204ENST00000492741 KDM3BQ7LBC6 1761 aa28.35■■■□□ 2.13
PSPC1-204ENST00000492741 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
PSPC1-204ENST00000492741 BCAR3O75815 825 aa28.34■■■□□ 2.13
PSPC1-204ENST00000492741 KRT27Q7Z3Y8 459 aa28.34■■■□□ 2.13
PSPC1-204ENST00000492741 SMC4Q9NTJ3 1288 aa28.33■■■□□ 2.13
PSPC1-204ENST00000492741 FMNL2Q96PY5 1086 aa28.32■■■□□ 2.12
PSPC1-204ENST00000492741 DOT1LQ8TEK3 1739 aa28.32■■■□□ 2.12
PSPC1-204ENST00000492741 BCL9O00512 1426 aa28.32■■■□□ 2.12
PSPC1-204ENST00000492741 ALDH1L2Q3SY69 923 aa28.31■■■□□ 2.12
PSPC1-204ENST00000492741 SSH1Q8WYL5 1049 aa28.31■■■□□ 2.12
PSPC1-204ENST00000492741 ZNF496Q96IT1 587 aaPredicted RBP28.31■■■□□ 2.12
PSPC1-204ENST00000492741 ASAP1Q9ULH1 1129 aa28.31■■■□□ 2.12
PSPC1-204ENST00000492741 ITGB4P16144 1822 aa28.31■■■□□ 2.12
PSPC1-204ENST00000492741 SOS1Q07889 1333 aaPredicted RBP28.31■■■□□ 2.12
PSPC1-204ENST00000492741 TCERG1O14776 1098 aaKnown RBP28.29■■■□□ 2.12
PSPC1-204ENST00000492741 PTCD1O75127 700 aaKnown RBP28.29■■■□□ 2.12
PSPC1-204ENST00000492741 KCNQ2O43526 872 aa28.29■■■□□ 2.12
PSPC1-204ENST00000492741 GIGYF1O75420 1035 aaPredicted RBP28.29■■■□□ 2.12
PSPC1-204ENST00000492741 EIF2S2P20042 333 aaKnown RBP28.29■■■□□ 2.12
PSPC1-204ENST00000492741 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.29■■■□□ 2.12
PSPC1-204ENST00000492741 NECTIN2Q92692 538 aa28.29■■■□□ 2.12
PSPC1-204ENST00000492741 ATG3Q9NT62 314 aa28.29■■■□□ 2.12
PSPC1-204ENST00000492741 HOXB7P09629 217 aa28.28■■■□□ 2.12
PSPC1-204ENST00000492741 RRP1P56182 461 aaKnown RBP28.28■■■□□ 2.12
PSPC1-204ENST00000492741 CHMP4AQ9BY43 222 aa28.28■■■□□ 2.12
PSPC1-204ENST00000492741 NEFLP07196 543 aa28.27■■■□□ 2.12
PSPC1-204ENST00000492741 CANXP27824 592 aaKnown RBP28.27■■■□□ 2.12
PSPC1-204ENST00000492741 CCDC30Q5VVM6 783 aa28.27■■■□□ 2.12
PSPC1-204ENST00000492741 HDGFL1Q5TGJ6 251 aa28.26■■■□□ 2.12
PSPC1-204ENST00000492741 FRAT1Q92837 279 aaPredicted RBP28.26■■■□□ 2.12
PSPC1-204ENST00000492741 PLIN1O60240 522 aa28.26■■■□□ 2.11
PSPC1-204ENST00000492741 SNRPA1P09661 255 aaKnown RBP28.26■■■□□ 2.11
PSPC1-204ENST00000492741 FAM196AQ6ZSG2 479 aa28.26■■■□□ 2.11
PSPC1-204ENST00000492741 RBM42Q9BTD8 480 aaKnown RBP28.26■■■□□ 2.11
PSPC1-204ENST00000492741 HEG1Q9ULI3 1381 aa28.25■■■□□ 2.11
PSPC1-204ENST00000492741 STK31Q9BXU1 1019 aa28.25■■■□□ 2.11
PSPC1-204ENST00000492741 RNF123Q5XPI4 1314 aa28.24■■■□□ 2.11
PSPC1-204ENST00000492741 BRWD3Q6RI45 1802 aa28.24■■■□□ 2.11
PSPC1-204ENST00000492741 PRAMEF22A3QJZ6 481 aa28.23■■■□□ 2.11
PSPC1-204ENST00000492741 MRPL50Q8N5N7 158 aaKnown RBP28.22■■■□□ 2.11
PSPC1-204ENST00000492741 RGS12O14924 1447 aa28.22■■■□□ 2.11
PSPC1-204ENST00000492741 PAPPAQ13219 1627 aa28.21■■■□□ 2.11
PSPC1-204ENST00000492741 SLC4A2P04920 1241 aa28.21■■■□□ 2.11
PSPC1-204ENST00000492741 SMARCC1Q92922 1105 aaPredicted RBP28.21■■■□□ 2.11
PSPC1-204ENST00000492741 KIF16BQ96L93 1317 aa28.2■■■□□ 2.1
PSPC1-204ENST00000492741 IRX6P78412 446 aaPredicted RBP28.2■■■□□ 2.1
PSPC1-204ENST00000492741 KCPQ6ZWJ8 1503 aa28.19■■■□□ 2.1
PSPC1-204ENST00000492741 NOB1Q9ULX3 412 aaKnown RBP28.19■■■□□ 2.1
PSPC1-204ENST00000492741 USP16Q9Y5T5 823 aa28.18■■■□□ 2.1
PSPC1-204ENST00000492741 IPO8O15397 1037 aaKnown RBP28.18■■■□□ 2.1
PSPC1-204ENST00000492741 BRPF1P55201 1214 aaPredicted RBP28.18■■■□□ 2.1
PSPC1-204ENST00000492741 PTF1AQ7RTS3 328 aa28.18■■■□□ 2.1
PSPC1-204ENST00000492741 VSIG10Q8N0Z9 540 aa28.17■■■□□ 2.1
PSPC1-204ENST00000492741 UBR2Q8IWV8 1755 aa28.17■■■□□ 2.1
PSPC1-204ENST00000492741 ZKSCAN2Q63HK3 967 aa28.16■■■□□ 2.1
PSPC1-204ENST00000492741 PALLDQ8WX93 1383 aa28.16■■■□□ 2.1
PSPC1-204ENST00000492741 TEX13AQ9BXU3 409 aaPredicted RBP28.15■■■□□ 2.1
PSPC1-204ENST00000492741 BCL11BQ9C0K0 894 aaPredicted RBP28.15■■■□□ 2.1
PSPC1-204ENST00000492741 CHPF2Q9P2E5 772 aa28.15■■■□□ 2.1
PSPC1-204ENST00000492741 DBF4Q9UBU7 674 aaPredicted RBP28.15■■■□□ 2.1
PSPC1-204ENST00000492741 NHSQ6T4R5 1651 aa28.14■■■□□ 2.1
PSPC1-204ENST00000492741 TRIM37O94972 964 aa28.14■■■□□ 2.1
PSPC1-204ENST00000492741 FKBP8Q14318 412 aa28.13■■■□□ 2.09
PSPC1-204ENST00000492741 C5P01031 1676 aa28.12■■■□□ 2.09
PSPC1-204ENST00000492741 LOC102724428A0A0B4J2F2 783 aa28.12■■■□□ 2.09
PSPC1-204ENST00000492741 ATP6V1AP38606 617 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms