RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 LY75O60449 1722 aa9.62□□□□□ -0.87
PDLIM1-204ENST00000492511 PNPLA7Q6ZV29 1317 aa9.62□□□□□ -0.87
PDLIM1-204ENST00000492511 LINC00116Q8NCU8 138 aa9.62□□□□□ -0.87
PDLIM1-204ENST00000492511 PLEKHF1Q96S99 279 aa9.62□□□□□ -0.87
PDLIM1-204ENST00000492511 SLC52A2Q9HAB3 445 aa9.62□□□□□ -0.87
PDLIM1-204ENST00000492511 ITGB4P16144 1822 aa9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 MYBBP1AQ9BQG0 1328 aaKnown RBP9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 ZBTB7AO95365 584 aa9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 PTGER2P43116 358 aa9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 SMIM5Q71RC9 77 aa9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 GAS2L2Q8NHY3 880 aa9.61□□□□□ -0.87
PDLIM1-204ENST00000492511 CASZ1Q86V15 1759 aa9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 GNAT3A8MTJ3 354 aa9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 COL23A1Q86Y22 540 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 TFCP2L1Q9NZI6 479 aa9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
PDLIM1-204ENST00000492511 ADAMTS7Q9UKP4 1686 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 SLC39A6Q13433 755 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 CEMIPQ8WUJ3 1361 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 MRC1P22897 1456 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 KAT6BQ8WYB5 2073 aa9.59□□□□□ -0.87
PDLIM1-204ENST00000492511 MTFR1LQ9H019 292 aa9.58□□□□□ -0.88
PDLIM1-204ENST00000492511 DCTN1Q14203 1278 aa9.57□□□□□ -0.88
PDLIM1-204ENST00000492511 CCDC184Q52MB2 194 aa9.57□□□□□ -0.88
PDLIM1-204ENST00000492511 MCM10Q7L590 875 aa9.57□□□□□ -0.88
PDLIM1-204ENST00000492511 CHD4Q14839 1912 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 SCN11AQ9UI33 1791 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 KCNQ3O43525 872 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 RC3H1Q5TC82 1133 aaKnown RBP9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 SLC16A10Q8TF71 515 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 AK7Q96M32 723 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 ADAMTS8Q9UP79 889 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 C4BP0C0L5 1744 aa9.56□□□□□ -0.88
PDLIM1-204ENST00000492511 C5P01031 1676 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 GNPATO15228 680 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 HMGB2P26583 209 aaKnown RBP9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 TEFQ10587 303 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 INTS5Q6P9B9 1019 aaKnown RBP9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 ZNF790Q6PG37 636 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 DNAJC10Q8IXB1 793 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 KCPQ6ZWJ8 1503 aa9.55□□□□□ -0.88
PDLIM1-204ENST00000492511 RPS6KA4O75676 772 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 PHF14O94880 888 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 CYP19A1P11511 503 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 SSFA2P28290 1259 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 CRKLP46109 303 aaKnown RBP9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 CCDC146Q8IYE0 955 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 FLAD1Q8NFF5 587 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 TAF1LQ8IZX4 1826 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 TUBGCP6Q96RT7 1819 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 CNTNAP4Q9C0A0 1308 aa9.54□□□□□ -0.88
PDLIM1-204ENST00000492511 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 ZNF831Q5JPB2 1677 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 MSH5O43196 834 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 RTF1Q92541 710 aaKnown RBP9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 ARHGEF1Q92888 912 aaKnown RBP9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 THUMPD2Q9BTF0 503 aaKnown RBP9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 PNNQ9H307 717 aaKnown RBP9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 MIS18AQ9NYP9 233 aa9.53□□□□□ -0.88
PDLIM1-204ENST00000492511 TMPOP42166 694 aaKnown RBP9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 RIPK4P57078 832 aa9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 TAF7Q15545 349 aaPredicted RBP9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 ARXQ96QS3 562 aa9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 FHDC1Q9C0D6 1143 aaPredicted RBP9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 RTCBQ9Y3I0 505 aaKnown RBP9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 UTRNP46939 3433 aa9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 MAPK8IP3Q9UPT6 1336 aa9.52□□□□□ -0.89
PDLIM1-204ENST00000492511 GOLGB1Q14789 3259 aaKnown RBP9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 HEG1Q9ULI3 1381 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 PRAMEF22A3QJZ6 481 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 WDR43Q15061 677 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 TTC5Q8N0Z6 440 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 RUNDC1Q96C34 613 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 CCDC87Q9NVE4 849 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 TRIM35Q9UPQ4 493 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 UBR3Q6ZT12 1888 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 COL5A3P25940 1745 aaPredicted RBP9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 TJP1Q07157 1748 aa9.51□□□□□ -0.89
PDLIM1-204ENST00000492511 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 CICQ96RK0 1608 aaPredicted RBP9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 NEFMP07197 916 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 ADRA2BP18089 450 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 POLD1P28340 1107 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms