RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 PHACTR3Q96KR7 559 aa18.37■□□□□ 0.53
PTPN7-215ENST00000492451 MTFR1LQ9H019 292 aa18.37■□□□□ 0.53
PTPN7-215ENST00000492451 PALLDQ8WX93 1383 aa18.37■□□□□ 0.53
PTPN7-215ENST00000492451 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
PTPN7-215ENST00000492451 MAP3K5Q99683 1374 aa18.36■□□□□ 0.53
PTPN7-215ENST00000492451 TUBGCP6Q96RT7 1819 aa18.35■□□□□ 0.53
PTPN7-215ENST00000492451 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
PTPN7-215ENST00000492451 ANP32CO43423 234 aa18.35■□□□□ 0.53
PTPN7-215ENST00000492451 VIRMAQ69YN4 1812 aaKnown RBP18.35■□□□□ 0.53
PTPN7-215ENST00000492451 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
PTPN7-215ENST00000492451 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
PTPN7-215ENST00000492451 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
PTPN7-215ENST00000492451 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
PTPN7-215ENST00000492451 ASAP1Q9ULH1 1129 aa18.34■□□□□ 0.53
PTPN7-215ENST00000492451 WDR43Q15061 677 aaKnown RBP eCLIP18.33■□□□□ 0.52
PTPN7-215ENST00000492451 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
PTPN7-215ENST00000492451 TFCP2L1Q9NZI6 479 aa18.33■□□□□ 0.52
PTPN7-215ENST00000492451 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
PTPN7-215ENST00000492451 FHDC1Q9C0D6 1143 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-215ENST00000492451 MRC1P22897 1456 aa18.32■□□□□ 0.52
PTPN7-215ENST00000492451 QSER1Q2KHR3 1735 aa18.32■□□□□ 0.52
PTPN7-215ENST00000492451 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
PTPN7-215ENST00000492451 LOC102724428A0A0B4J2F2 783 aa18.31■□□□□ 0.52
PTPN7-215ENST00000492451 SIK1P57059 783 aa18.31■□□□□ 0.52
PTPN7-215ENST00000492451 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
PTPN7-215ENST00000492451 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
PTPN7-215ENST00000492451 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
PTPN7-215ENST00000492451 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
PTPN7-215ENST00000492451 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
PTPN7-215ENST00000492451 C5P01031 1676 aa18.29■□□□□ 0.52
PTPN7-215ENST00000492451 TEFQ10587 303 aa18.29■□□□□ 0.52
PTPN7-215ENST00000492451 IL17REQ8NFR9 667 aa18.29■□□□□ 0.52
PTPN7-215ENST00000492451 ARXQ96QS3 562 aa18.29■□□□□ 0.52
PTPN7-215ENST00000492451 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
PTPN7-215ENST00000492451 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
PTPN7-215ENST00000492451 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
PTPN7-215ENST00000492451 ATP6V1AP38606 617 aa18.27■□□□□ 0.52
PTPN7-215ENST00000492451 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
PTPN7-215ENST00000492451 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
PTPN7-215ENST00000492451 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.51
PTPN7-215ENST00000492451 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
PTPN7-215ENST00000492451 ITPK1Q13572 414 aa18.26■□□□□ 0.51
PTPN7-215ENST00000492451 LINC00116Q8NCU8 138 aa18.26■□□□□ 0.51
PTPN7-215ENST00000492451 SLC16A10Q8TF71 515 aa18.26■□□□□ 0.51
PTPN7-215ENST00000492451 ADAMTS8Q9UP79 889 aa18.25■□□□□ 0.51
PTPN7-215ENST00000492451 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
PTPN7-215ENST00000492451 DLG5Q8TDM6 1919 aa18.24■□□□□ 0.51
PTPN7-215ENST00000492451 PTCD1O75127 700 aaKnown RBP18.24■□□□□ 0.51
PTPN7-215ENST00000492451 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
PTPN7-215ENST00000492451 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
PTPN7-215ENST00000492451 SLC4A9Q96Q91 983 aa18.24■□□□□ 0.51
PTPN7-215ENST00000492451 SIPA1L3O60292 1781 aaPredicted RBP18.24■□□□□ 0.51
PTPN7-215ENST00000492451 MSH5O43196 834 aa18.23■□□□□ 0.51
PTPN7-215ENST00000492451 MCM10Q7L590 875 aa18.23■□□□□ 0.51
PTPN7-215ENST00000492451 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
PTPN7-215ENST00000492451 AK7Q96M32 723 aa18.23■□□□□ 0.51
PTPN7-215ENST00000492451 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
PTPN7-215ENST00000492451 FLAD1Q8NFF5 587 aa18.22■□□□□ 0.51
PTPN7-215ENST00000492451 LMOD3Q0VAK6 560 aa18.21■□□□□ 0.51
PTPN7-215ENST00000492451 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-215ENST00000492451 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 TMPOP42166 694 aaKnown RBP18.2■□□□□ 0.5
PTPN7-215ENST00000492451 RIPK4P57078 832 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 DCTN1Q14203 1278 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 CCDC146Q8IYE0 955 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 MRS2Q9HD23 443 aa18.2■□□□□ 0.5
PTPN7-215ENST00000492451 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-215ENST00000492451 UBR2Q8IWV8 1755 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 PHF14O94880 888 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 POLD1P28340 1107 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
PTPN7-215ENST00000492451 CCDC184Q52MB2 194 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 RC3H1Q5TC82 1133 aaKnown RBP18.19■□□□□ 0.5
PTPN7-215ENST00000492451 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 NLGN2Q8NFZ4 835 aa18.19■□□□□ 0.5
PTPN7-215ENST00000492451 UBR3Q6ZT12 1888 aa18.18■□□□□ 0.5
PTPN7-215ENST00000492451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.18■□□□□ 0.5
PTPN7-215ENST00000492451 PNISRQ8TF01 805 aaKnown RBP18.18■□□□□ 0.5
PTPN7-215ENST00000492451 CNTNAP4Q9C0A0 1308 aa18.18■□□□□ 0.5
PTPN7-215ENST00000492451 YY1P25490 414 aa18.17■□□□□ 0.5
PTPN7-215ENST00000492451 SSFA2P28290 1259 aa18.17■□□□□ 0.5
PTPN7-215ENST00000492451 TJP1Q07157 1748 aa18.17■□□□□ 0.5
PTPN7-215ENST00000492451 GNPATO15228 680 aa18.16■□□□□ 0.5
PTPN7-215ENST00000492451 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
PTPN7-215ENST00000492451 TEX13AQ9BXU3 409 aaPredicted RBP18.16■□□□□ 0.5
PTPN7-215ENST00000492451 DNAJC10Q8IXB1 793 aa18.15■□□□□ 0.5
PTPN7-215ENST00000492451 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-215ENST00000492451 RTCBQ9Y3I0 505 aaKnown RBP18.15■□□□□ 0.5
PTPN7-215ENST00000492451 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
PTPN7-215ENST00000492451 UTRNP46939 3433 aa18.14■□□□□ 0.49
PTPN7-215ENST00000492451 CRKLP46109 303 aaKnown RBP18.14■□□□□ 0.49
PTPN7-215ENST00000492451 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
PTPN7-215ENST00000492451 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.49
PTPN7-215ENST00000492451 DCAF8L1A6NGE4 600 aa18.13■□□□□ 0.49
PTPN7-215ENST00000492451 RPS6KA4O75676 772 aa18.13■□□□□ 0.49
PTPN7-215ENST00000492451 STARD3NLO95772 234 aa18.13■□□□□ 0.49
PTPN7-215ENST00000492451 CYP19A1P11511 503 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms