RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 RGPD5Q99666 1765 aa22.49■■□□□ 1.19
EXD3-212ENST00000491734 G2E3Q7L622 706 aa22.49■■□□□ 1.19
EXD3-212ENST00000491734 INTS3Q68E01 1043 aaKnown RBP22.49■■□□□ 1.19
EXD3-212ENST00000491734 AXIN2Q9Y2T1 843 aa22.49■■□□□ 1.19
EXD3-212ENST00000491734 CLCN1P35523 988 aa22.48■■□□□ 1.19
EXD3-212ENST00000491734 BRINP3Q76B58 766 aa22.48■■□□□ 1.19
EXD3-212ENST00000491734 NUCB1Q02818 461 aa22.48■■□□□ 1.19
EXD3-212ENST00000491734 TAF7Q15545 349 aaPredicted RBP22.47■■□□□ 1.19
EXD3-212ENST00000491734 ANKRD24Q8TF21 1146 aa22.47■■□□□ 1.19
EXD3-212ENST00000491734 PTPRCP08575 1304 aa22.47■■□□□ 1.19
EXD3-212ENST00000491734 SPATA31A3Q5VYP0 1347 aa22.46■■□□□ 1.19
EXD3-212ENST00000491734 MRE11P49959 708 aa22.46■■□□□ 1.19
EXD3-212ENST00000491734 LNPKQ9C0E8 428 aa22.46■■□□□ 1.19
EXD3-212ENST00000491734 LGR6Q9HBX8 967 aa22.46■■□□□ 1.19
EXD3-212ENST00000491734 COL18A1P39060 1754 aa22.45■■□□□ 1.18
EXD3-212ENST00000491734 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
EXD3-212ENST00000491734 TRAK2O60296 914 aa22.45■■□□□ 1.18
EXD3-212ENST00000491734 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
EXD3-212ENST00000491734 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
EXD3-212ENST00000491734 DDIT3P35638 169 aa22.44■■□□□ 1.18
EXD3-212ENST00000491734 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
EXD3-212ENST00000491734 LMO7Q8WWI1 1683 aa22.44■■□□□ 1.18
EXD3-212ENST00000491734 CHD1LQ86WJ1 897 aa22.43■■□□□ 1.18
EXD3-212ENST00000491734 F6X3S4 739 aa22.43■■□□□ 1.18
EXD3-212ENST00000491734 ABCC6O95255 1503 aa22.43■■□□□ 1.18
EXD3-212ENST00000491734 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
EXD3-212ENST00000491734 CEMIPQ8WUJ3 1361 aa22.42■■□□□ 1.18
EXD3-212ENST00000491734 ZNF530Q6P9A1 599 aaPredicted RBP22.42■■□□□ 1.18
EXD3-212ENST00000491734 SNX21Q969T3 373 aa22.42■■□□□ 1.18
EXD3-212ENST00000491734 GCC1Q96CN9 775 aa22.41■■□□□ 1.18
EXD3-212ENST00000491734 RBM25P49756 843 aaKnown RBP22.4■■□□□ 1.18
EXD3-212ENST00000491734 PLEKHO1Q53GL0 409 aaPredicted RBP22.4■■□□□ 1.18
EXD3-212ENST00000491734 AEBP2Q6ZN18 517 aaPredicted RBP22.4■■□□□ 1.18
EXD3-212ENST00000491734 STK31Q9BXU1 1019 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 BABAM1Q9NWV8 329 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 ERBB3P21860 1342 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 SOS2Q07890 1332 aaPredicted RBP22.4■■□□□ 1.18
EXD3-212ENST00000491734 SLC4A10Q6U841 1118 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 HSCBQ8IWL3 235 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 MEIS3Q99687 375 aa22.4■■□□□ 1.18
EXD3-212ENST00000491734 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.18
EXD3-212ENST00000491734 MPRIPQ6WCQ1 1025 aa22.39■■□□□ 1.18
EXD3-212ENST00000491734 MFAP1P55081 439 aaKnown RBP22.39■■□□□ 1.17
EXD3-212ENST00000491734 AKAP4Q5JQC9 854 aa22.39■■□□□ 1.17
EXD3-212ENST00000491734 CABLES1Q8TDN4 633 aa22.39■■□□□ 1.17
EXD3-212ENST00000491734 CIZ1Q9ULV3 898 aaPredicted RBP22.39■■□□□ 1.17
EXD3-212ENST00000491734 PANK2Q9BZ23 570 aa22.38■■□□□ 1.17
EXD3-212ENST00000491734 NHSL1Q5SYE7 1610 aa22.37■■□□□ 1.17
EXD3-212ENST00000491734 KCNQ3O43525 872 aa22.37■■□□□ 1.17
EXD3-212ENST00000491734 FAM208AQ9UK61 1670 aaKnown RBP22.37■■□□□ 1.17
EXD3-212ENST00000491734 CPDO75976 1380 aa22.37■■□□□ 1.17
EXD3-212ENST00000491734 FLIIQ13045 1269 aa22.36■■□□□ 1.17
EXD3-212ENST00000491734 ATP10DQ9P241 1426 aa22.36■■□□□ 1.17
EXD3-212ENST00000491734 AMOTQ4VCS5 1084 aa22.36■■□□□ 1.17
EXD3-212ENST00000491734 ANKRD44Q8N8A2 993 aa22.35■■□□□ 1.17
EXD3-212ENST00000491734 GRPEL1Q9HAV7 217 aa22.35■■□□□ 1.17
EXD3-212ENST00000491734 CEP85Q6P2H3 762 aa22.35■■□□□ 1.17
EXD3-212ENST00000491734 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
EXD3-212ENST00000491734 PTMSP20962 102 aa22.34■■□□□ 1.17
EXD3-212ENST00000491734 EIF4A1P60842 406 aaKnown RBP22.34■■□□□ 1.17
EXD3-212ENST00000491734 RNMTO43148 476 aaKnown RBP22.33■■□□□ 1.17
EXD3-212ENST00000491734 FKBP5Q13451 457 aaPredicted RBP22.33■■□□□ 1.17
EXD3-212ENST00000491734 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
EXD3-212ENST00000491734 GZF1Q9H116 711 aaPredicted RBP22.33■■□□□ 1.17
EXD3-212ENST00000491734 CCT4P50991 539 aaKnown RBP22.33■■□□□ 1.16
EXD3-212ENST00000491734 TEFQ10587 303 aa22.33■■□□□ 1.16
EXD3-212ENST00000491734 C1orf141Q5JVX7 400 aa22.33■■□□□ 1.16
EXD3-212ENST00000491734 DCTPP1Q9H773 170 aa22.33■■□□□ 1.16
EXD3-212ENST00000491734 LTBP4Q8N2S1 1624 aa22.33■■□□□ 1.16
EXD3-212ENST00000491734 ABCA3Q99758 1704 aa22.32■■□□□ 1.16
EXD3-212ENST00000491734 SOS1Q07889 1333 aaPredicted RBP22.32■■□□□ 1.16
EXD3-212ENST00000491734 BTBD11A6QL63 1104 aa22.32■■□□□ 1.16
EXD3-212ENST00000491734 RPAP2Q8IXW5 612 aaPredicted RBP22.32■■□□□ 1.16
EXD3-212ENST00000491734 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
EXD3-212ENST00000491734 CHRNA2Q15822 529 aa22.31■■□□□ 1.16
EXD3-212ENST00000491734 PHAXQ9H814 394 aaKnown RBP22.31■■□□□ 1.16
EXD3-212ENST00000491734 NLRP2Q9NX02 1062 aa22.31■■□□□ 1.16
EXD3-212ENST00000491734 SKOR2Q2VWA4 1001 aaPredicted RBP22.3■■□□□ 1.16
EXD3-212ENST00000491734 KDM3BQ7LBC6 1761 aa22.3■■□□□ 1.16
EXD3-212ENST00000491734 ADAMTS7Q9UKP4 1686 aa22.29■■□□□ 1.16
EXD3-212ENST00000491734 OVOS2A0A0G2JMS6 1433 aa22.29■■□□□ 1.16
EXD3-212ENST00000491734 RAB3GAP1Q15042 981 aa22.28■■□□□ 1.16
EXD3-212ENST00000491734 GBP4Q96PP9 640 aa22.28■■□□□ 1.16
EXD3-212ENST00000491734 PLEKHG2Q9H7P9 1386 aa22.28■■□□□ 1.16
EXD3-212ENST00000491734 CACNA1FO60840 1977 aa22.27■■□□□ 1.16
EXD3-212ENST00000491734 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
EXD3-212ENST00000491734 C16orf71Q8IYS4 520 aaPredicted RBP22.26■■□□□ 1.15
EXD3-212ENST00000491734 TNPO1Q92973 898 aaKnown RBP22.26■■□□□ 1.15
EXD3-212ENST00000491734 NAP1L5Q96NT1 182 aaPredicted RBP22.26■■□□□ 1.15
EXD3-212ENST00000491734 ESPNB1AK53 854 aa22.26■■□□□ 1.15
EXD3-212ENST00000491734 APBB1O00213 710 aa22.25■■□□□ 1.15
EXD3-212ENST00000491734 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
EXD3-212ENST00000491734 CHPF2Q9P2E5 772 aa22.25■■□□□ 1.15
EXD3-212ENST00000491734 SIPA1L3O60292 1781 aaPredicted RBP22.25■■□□□ 1.15
EXD3-212ENST00000491734 RAPGEF4Q8WZA2 1011 aa22.25■■□□□ 1.15
EXD3-212ENST00000491734 ARXQ96QS3 562 aa22.25■■□□□ 1.15
EXD3-212ENST00000491734 RRP9O43818 475 aaKnown RBP22.24■■□□□ 1.15
EXD3-212ENST00000491734 SMARCA5O60264 1052 aaPredicted RBP22.24■■□□□ 1.15
EXD3-212ENST00000491734 ANXA1P04083 346 aa22.24■■□□□ 1.15
EXD3-212ENST00000491734 GLIPR1L2Q4G1C9 344 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 259 ms