RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 PIGBQ92521 554 aa18■□□□□ 0.47
DNMT3A-214ENST00000491288 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
DNMT3A-214ENST00000491288 TUBGCP6Q96RT7 1819 aa18■□□□□ 0.47
DNMT3A-214ENST00000491288 FCHSD2O94868 740 aa17.99■□□□□ 0.47
DNMT3A-214ENST00000491288 GPR162Q16538 588 aa17.99■□□□□ 0.47
DNMT3A-214ENST00000491288 KDRP35968 1356 aa17.99■□□□□ 0.47
DNMT3A-214ENST00000491288 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
DNMT3A-214ENST00000491288 PHKG2P15735 406 aa17.98■□□□□ 0.47
DNMT3A-214ENST00000491288 COL3A1P02461 1466 aaPredicted RBP17.98■□□□□ 0.47
DNMT3A-214ENST00000491288 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
DNMT3A-214ENST00000491288 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
DNMT3A-214ENST00000491288 AMIGO3Q86WK7 504 aa17.96■□□□□ 0.47
DNMT3A-214ENST00000491288 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
DNMT3A-214ENST00000491288 CD2APQ9Y5K6 639 aa17.95■□□□□ 0.46
DNMT3A-214ENST00000491288 C5P01031 1676 aa17.94■□□□□ 0.46
DNMT3A-214ENST00000491288 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
DNMT3A-214ENST00000491288 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
DNMT3A-214ENST00000491288 GAS2L2Q8NHY3 880 aa17.94■□□□□ 0.46
DNMT3A-214ENST00000491288 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
DNMT3A-214ENST00000491288 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 MSH5O43196 834 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 GRIN3BO60391 1043 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 SIK1P57059 783 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 MTHFSDQ2M296 383 aaKnown RBP17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 KLHL34Q8N239 644 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 RSPH6AQ9H0K4 717 aa17.93■□□□□ 0.46
DNMT3A-214ENST00000491288 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
DNMT3A-214ENST00000491288 ERVV-2B6SEH9 535 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 SSFA2P28290 1259 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 CABP4P57796 275 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 CHD4Q14839 1912 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 C4BP0C0L5 1744 aa17.91■□□□□ 0.46
DNMT3A-214ENST00000491288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 LINC00116Q8NCU8 138 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 AK7Q96M32 723 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 ASAP1Q9ULH1 1129 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
DNMT3A-214ENST00000491288 TAF1LQ8IZX4 1826 aa17.89■□□□□ 0.45
DNMT3A-214ENST00000491288 ITPK1Q13572 414 aa17.89■□□□□ 0.45
DNMT3A-214ENST00000491288 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
DNMT3A-214ENST00000491288 ATG3Q9NT62 314 aa17.89■□□□□ 0.45
DNMT3A-214ENST00000491288 RTF1Q92541 710 aaKnown RBP17.88■□□□□ 0.45
DNMT3A-214ENST00000491288 ITGB4P16144 1822 aa17.88■□□□□ 0.45
DNMT3A-214ENST00000491288 SMIM5Q71RC9 77 aa17.87■□□□□ 0.45
DNMT3A-214ENST00000491288 PELP1Q8IZL8 1130 aaKnown RBP17.87■□□□□ 0.45
DNMT3A-214ENST00000491288 MRS2Q9HD23 443 aa17.87■□□□□ 0.45
DNMT3A-214ENST00000491288 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
DNMT3A-214ENST00000491288 ATP6V1AP38606 617 aa17.85■□□□□ 0.45
DNMT3A-214ENST00000491288 NFATC2IPQ8NCF5 419 aa17.85■□□□□ 0.45
DNMT3A-214ENST00000491288 SLC4A9Q96Q91 983 aa17.85■□□□□ 0.45
DNMT3A-214ENST00000491288 LGR6Q9HBX8 967 aa17.85■□□□□ 0.45
DNMT3A-214ENST00000491288 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
DNMT3A-214ENST00000491288 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
DNMT3A-214ENST00000491288 PHF14O94880 888 aa17.84■□□□□ 0.45
DNMT3A-214ENST00000491288 TEFQ10587 303 aa17.84■□□□□ 0.45
DNMT3A-214ENST00000491288 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
DNMT3A-214ENST00000491288 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
DNMT3A-214ENST00000491288 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
DNMT3A-214ENST00000491288 RUNDC1Q96C34 613 aa17.83■□□□□ 0.44
DNMT3A-214ENST00000491288 GNPATO15228 680 aa17.82■□□□□ 0.44
DNMT3A-214ENST00000491288 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
DNMT3A-214ENST00000491288 RC3H1Q5TC82 1133 aaKnown RBP17.82■□□□□ 0.44
DNMT3A-214ENST00000491288 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
DNMT3A-214ENST00000491288 ADCY9O60503 1353 aa17.81■□□□□ 0.44
DNMT3A-214ENST00000491288 GIGYF1O75420 1035 aaPredicted RBP17.81■□□□□ 0.44
DNMT3A-214ENST00000491288 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
DNMT3A-214ENST00000491288 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
DNMT3A-214ENST00000491288 CCDC146Q8IYE0 955 aa17.8■□□□□ 0.44
DNMT3A-214ENST00000491288 IL17REQ8NFR9 667 aa17.8■□□□□ 0.44
DNMT3A-214ENST00000491288 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
DNMT3A-214ENST00000491288 CNTNAP4Q9C0A0 1308 aa17.79■□□□□ 0.44
DNMT3A-214ENST00000491288 ADRA2BP18089 450 aa17.79■□□□□ 0.44
DNMT3A-214ENST00000491288 RIPK4P57078 832 aa17.79■□□□□ 0.44
DNMT3A-214ENST00000491288 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
DNMT3A-214ENST00000491288 LMOD3Q0VAK6 560 aa17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 TRAPPC3LQ5T215 181 aa17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 RTCBQ9Y3I0 505 aaKnown RBP17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 SCN11AQ9UI33 1791 aa17.78■□□□□ 0.44
DNMT3A-214ENST00000491288 SENP3-EIF4A1A0A087X0R7 540 aa17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 MMP10P09238 476 aa17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 ARHGEF1Q92888 912 aaKnown RBP17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 ATP10DQ9P241 1426 aa17.77■□□□□ 0.44
DNMT3A-214ENST00000491288 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
DNMT3A-214ENST00000491288 MCM10Q7L590 875 aa17.76■□□□□ 0.43
DNMT3A-214ENST00000491288 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
DNMT3A-214ENST00000491288 PTCD1O75127 700 aaKnown RBP17.75■□□□□ 0.43
DNMT3A-214ENST00000491288 GYS1P13807 737 aa17.75■□□□□ 0.43
DNMT3A-214ENST00000491288 TGFB2P61812 414 aa17.75■□□□□ 0.43
DNMT3A-214ENST00000491288 DCTN1Q14203 1278 aa17.75■□□□□ 0.43
DNMT3A-214ENST00000491288 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
DNMT3A-214ENST00000491288 BTBD11A6QL63 1104 aa17.74■□□□□ 0.43
DNMT3A-214ENST00000491288 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
DNMT3A-214ENST00000491288 RRP7AQ9Y3A4 280 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms