RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 TEFQ10587 303 aa21.1■□□□□ 0.97
CLIC4-203ENST00000489758 EP400Q96L91 3159 aa21.09■□□□□ 0.97
CLIC4-203ENST00000489758 TAF7Q15545 349 aaPredicted RBP21.07■□□□□ 0.96
CLIC4-203ENST00000489758 ZNF853P0CG23 659 aa21.06■□□□□ 0.96
CLIC4-203ENST00000489758 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
CLIC4-203ENST00000489758 SBF2Q86WG5 1849 aa21.06■□□□□ 0.96
CLIC4-203ENST00000489758 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
CLIC4-203ENST00000489758 ATG3Q9NT62 314 aa21.05■□□□□ 0.96
CLIC4-203ENST00000489758 ASAP1Q9ULH1 1129 aa21.05■□□□□ 0.96
CLIC4-203ENST00000489758 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
CLIC4-203ENST00000489758 IL16Q14005 1332 aa21.04■□□□□ 0.96
CLIC4-203ENST00000489758 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
CLIC4-203ENST00000489758 CHL1O00533 1208 aa21.04■□□□□ 0.96
CLIC4-203ENST00000489758 SF3B2Q13435 895 aaKnown RBP21.04■□□□□ 0.96
CLIC4-203ENST00000489758 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
CLIC4-203ENST00000489758 SLC39A6Q13433 755 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 CFAP44Q96MT7 982 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
CLIC4-203ENST00000489758 IFT57Q9NWB7 429 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 BABAM1Q9NWV8 329 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 ITGB4P16144 1822 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 PAPPAQ13219 1627 aa21.03■□□□□ 0.96
CLIC4-203ENST00000489758 TNS1Q9HBL0 1735 aaKnown RBP21.02■□□□□ 0.96
CLIC4-203ENST00000489758 KCNQ3O43525 872 aa21.02■□□□□ 0.96
CLIC4-203ENST00000489758 ZBED9Q6R2W3 1325 aa21.02■□□□□ 0.95
CLIC4-203ENST00000489758 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
CLIC4-203ENST00000489758 PALLDQ8WX93 1383 aa21■□□□□ 0.95
CLIC4-203ENST00000489758 KCPQ6ZWJ8 1503 aa21■□□□□ 0.95
CLIC4-203ENST00000489758 BTAF1O14981 1849 aa21■□□□□ 0.95
CLIC4-203ENST00000489758 APBA3O96018 575 aa21■□□□□ 0.95
CLIC4-203ENST00000489758 TSPYL4Q9UJ04 414 aa21■□□□□ 0.95
CLIC4-203ENST00000489758 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
CLIC4-203ENST00000489758 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
CLIC4-203ENST00000489758 GNAI1P63096 354 aa20.99■□□□□ 0.95
CLIC4-203ENST00000489758 GOLGA2Q08379 1002 aa20.99■□□□□ 0.95
CLIC4-203ENST00000489758 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
CLIC4-203ENST00000489758 MBIPQ9NS73 344 aa20.99■□□□□ 0.95
CLIC4-203ENST00000489758 PLSCR1O15162 318 aa20.98■□□□□ 0.95
CLIC4-203ENST00000489758 DEFB132Q7Z7B7 95 aa20.97■□□□□ 0.95
CLIC4-203ENST00000489758 CDCA7LQ96GN5 454 aa20.97■□□□□ 0.95
CLIC4-203ENST00000489758 ZNF496Q96IT1 587 aaPredicted RBP20.97■□□□□ 0.95
CLIC4-203ENST00000489758 SLC4A9Q96Q91 983 aa20.97■□□□□ 0.95
CLIC4-203ENST00000489758 KDM3BQ7LBC6 1761 aa20.97■□□□□ 0.95
CLIC4-203ENST00000489758 SLFN5Q08AF3 891 aa20.96■□□□□ 0.95
CLIC4-203ENST00000489758 TTC5Q8N0Z6 440 aa20.96■□□□□ 0.95
CLIC4-203ENST00000489758 TSR2Q969E8 191 aaKnown RBP20.96■□□□□ 0.95
CLIC4-203ENST00000489758 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
CLIC4-203ENST00000489758 HEG1Q9ULI3 1381 aa20.96■□□□□ 0.95
CLIC4-203ENST00000489758 PTCD1O75127 700 aaKnown RBP20.95■□□□□ 0.94
CLIC4-203ENST00000489758 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
CLIC4-203ENST00000489758 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
CLIC4-203ENST00000489758 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
CLIC4-203ENST00000489758 LOC102724428A0A0B4J2F2 783 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 E9PSI1 815 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 SIK1P57059 783 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 PROM2Q8N271 834 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 CAMKK2Q96RR4 588 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
CLIC4-203ENST00000489758 FMNL2Q96PY5 1086 aa20.93■□□□□ 0.94
CLIC4-203ENST00000489758 MYH16Q9H6N6 1097 aa20.93■□□□□ 0.94
CLIC4-203ENST00000489758 BAG6P46379 1132 aa20.92■□□□□ 0.94
CLIC4-203ENST00000489758 EN1Q05925 392 aaPredicted RBP20.92■□□□□ 0.94
CLIC4-203ENST00000489758 KRT24Q2M2I5 525 aa20.92■□□□□ 0.94
CLIC4-203ENST00000489758 VSIG10Q8N0Z9 540 aa20.92■□□□□ 0.94
CLIC4-203ENST00000489758 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
CLIC4-203ENST00000489758 KCNQ4P56696 695 aa20.91■□□□□ 0.94
CLIC4-203ENST00000489758 ITPK1Q13572 414 aa20.91■□□□□ 0.94
CLIC4-203ENST00000489758 TXNRD1Q16881 649 aa20.91■□□□□ 0.94
CLIC4-203ENST00000489758 LRRC4BQ9NT99 713 aa20.91■□□□□ 0.94
CLIC4-203ENST00000489758 RGPD3A6NKT7 1758 aaPredicted RBP20.9■□□□□ 0.94
CLIC4-203ENST00000489758 RGPD4Q7Z3J3 1758 aa20.9■□□□□ 0.94
CLIC4-203ENST00000489758 LY75O60449 1722 aa20.9■□□□□ 0.94
CLIC4-203ENST00000489758 EZH2Q15910 746 aaKnown RBP20.9■□□□□ 0.94
CLIC4-203ENST00000489758 SLC27A3Q5K4L6 730 aa20.9■□□□□ 0.94
CLIC4-203ENST00000489758 DUSP27Q5VZP5 1158 aa20.9■□□□□ 0.94
CLIC4-203ENST00000489758 CCNL1Q9UK58 526 aaPredicted RBP20.9■□□□□ 0.94
CLIC4-203ENST00000489758 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.93
CLIC4-203ENST00000489758 GIGYF1O75420 1035 aaPredicted RBP20.89■□□□□ 0.93
CLIC4-203ENST00000489758 ATP6V1AP38606 617 aa20.89■□□□□ 0.93
CLIC4-203ENST00000489758 C8orf58Q8NAV2 365 aa20.89■□□□□ 0.93
CLIC4-203ENST00000489758 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.93
CLIC4-203ENST00000489758 SNRPA1P09661 255 aaKnown RBP20.88■□□□□ 0.93
CLIC4-203ENST00000489758 ZNF831Q5JPB2 1677 aa20.88■□□□□ 0.93
CLIC4-203ENST00000489758 DNAJC10Q8IXB1 793 aa20.87■□□□□ 0.93
CLIC4-203ENST00000489758 TJP1Q07157 1748 aa20.87■□□□□ 0.93
CLIC4-203ENST00000489758 EXOSC9Q06265 439 aaKnown RBP20.86■□□□□ 0.93
CLIC4-203ENST00000489758 TSPYL6Q8N831 410 aa20.86■□□□□ 0.93
CLIC4-203ENST00000489758 LINC00116Q8NCU8 138 aa20.86■□□□□ 0.93
CLIC4-203ENST00000489758 USP16Q9Y5T5 823 aa20.85■□□□□ 0.93
CLIC4-203ENST00000489758 HOXB7P09629 217 aa20.84■□□□□ 0.93
CLIC4-203ENST00000489758 CYP19A1P11511 503 aaPredicted RBP20.84■□□□□ 0.93
CLIC4-203ENST00000489758 TEX13AQ9BXU3 409 aaPredicted RBP20.84■□□□□ 0.93
CLIC4-203ENST00000489758 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
CLIC4-203ENST00000489758 RREB1Q92766 1687 aa20.83■□□□□ 0.92
CLIC4-203ENST00000489758 SOS1Q07889 1333 aaPredicted RBP20.82■□□□□ 0.92
CLIC4-203ENST00000489758 TWISTNBQ3B726 338 aaPredicted RBP20.82■□□□□ 0.92
CLIC4-203ENST00000489758 C5P01031 1676 aa20.82■□□□□ 0.92
CLIC4-203ENST00000489758 VAMP4O75379 141 aa20.81■□□□□ 0.92
CLIC4-203ENST00000489758 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
CLIC4-203ENST00000489758 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 193.7 ms