RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
CPSF7-212ENST00000489728 DLG5Q8TDM6 1919 aa14.65□□□□□ -0.06
CPSF7-212ENST00000489728 NFATC2IPQ8NCF5 419 aa14.65□□□□□ -0.06
CPSF7-212ENST00000489728 RUNDC1Q96C34 613 aa14.65□□□□□ -0.06
CPSF7-212ENST00000489728 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
CPSF7-212ENST00000489728 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
CPSF7-212ENST00000489728 CCNL1Q9UK58 526 aaPredicted RBP14.65□□□□□ -0.06
CPSF7-212ENST00000489728 TAF1LQ8IZX4 1826 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 TEFQ10587 303 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 LRRC4BQ9NT99 713 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 ASAP1Q9ULH1 1129 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 UBR2Q8IWV8 1755 aa14.64□□□□□ -0.07
CPSF7-212ENST00000489728 LOC102724428A0A0B4J2F2 783 aa14.63□□□□□ -0.07
CPSF7-212ENST00000489728 SIK1P57059 783 aa14.63□□□□□ -0.07
CPSF7-212ENST00000489728 MRS2Q9HD23 443 aa14.63□□□□□ -0.07
CPSF7-212ENST00000489728 STK32BQ9NY57 414 aa14.63□□□□□ -0.07
CPSF7-212ENST00000489728 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
CPSF7-212ENST00000489728 ANO8Q9HCE9 1232 aaPredicted RBP14.62□□□□□ -0.07
CPSF7-212ENST00000489728 KCPQ6ZWJ8 1503 aa14.61□□□□□ -0.07
CPSF7-212ENST00000489728 C4BP0C0L5 1744 aa14.61□□□□□ -0.07
CPSF7-212ENST00000489728 SLC15A2Q16348 729 aa14.61□□□□□ -0.07
CPSF7-212ENST00000489728 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
CPSF7-212ENST00000489728 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-212ENST00000489728 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
CPSF7-212ENST00000489728 R3HDM1Q15032 1099 aaKnown RBP14.6□□□□□ -0.07
CPSF7-212ENST00000489728 CCDC184Q52MB2 194 aa14.6□□□□□ -0.07
CPSF7-212ENST00000489728 CASZ1Q86V15 1759 aa14.6□□□□□ -0.07
CPSF7-212ENST00000489728 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
CPSF7-212ENST00000489728 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
CPSF7-212ENST00000489728 TJP1Q07157 1748 aa14.58□□□□□ -0.07
CPSF7-212ENST00000489728 CCER2I3L3R5 266 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 ATP6V1AP38606 617 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 RIPK4P57078 832 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 ZNF790Q6PG37 636 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 MCM10Q7L590 875 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 TTC5Q8N0Z6 440 aa14.58□□□□□ -0.08
CPSF7-212ENST00000489728 LRP5O75197 1615 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 TAF7Q15545 349 aaPredicted RBP14.57□□□□□ -0.08
CPSF7-212ENST00000489728 ZNF827Q17R98 1081 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 CCDC146Q8IYE0 955 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 FLAD1Q8NFF5 587 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
CPSF7-212ENST00000489728 BABAM1Q9NWV8 329 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 CNTNAP4Q9C0A0 1308 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 KDM3BQ7LBC6 1761 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 TUBGCP6Q96RT7 1819 aa14.57□□□□□ -0.08
CPSF7-212ENST00000489728 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
CPSF7-212ENST00000489728 BTBD11A6QL63 1104 aa14.56□□□□□ -0.08
CPSF7-212ENST00000489728 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
CPSF7-212ENST00000489728 ITPK1Q13572 414 aa14.56□□□□□ -0.08
CPSF7-212ENST00000489728 RC3H1Q5TC82 1133 aaKnown RBP14.56□□□□□ -0.08
CPSF7-212ENST00000489728 DIEXFQ68CQ4 756 aaKnown RBP14.56□□□□□ -0.08
CPSF7-212ENST00000489728 UBR3Q6ZT12 1888 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 KCNQ4P56696 695 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 DCTN1Q14203 1278 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 AK7Q96M32 723 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 SLC4A9Q96Q91 983 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 TEX13AQ9BXU3 409 aaPredicted RBP14.55□□□□□ -0.08
CPSF7-212ENST00000489728 TFCP2L1Q9NZI6 479 aa14.55□□□□□ -0.08
CPSF7-212ENST00000489728 SSFA2P28290 1259 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 CALD1Q05682 793 aaKnown RBP14.54□□□□□ -0.08
CPSF7-212ENST00000489728 SLC39A6Q13433 755 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 NGEFQ8N5V2 710 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 LINC00116Q8NCU8 138 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 SLC16A10Q8TF71 515 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 FMNL2Q96PY5 1086 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
CPSF7-212ENST00000489728 PNPLA7Q6ZV29 1317 aa14.53□□□□□ -0.08
CPSF7-212ENST00000489728 APAF1O14727 1248 aa14.53□□□□□ -0.08
CPSF7-212ENST00000489728 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
CPSF7-212ENST00000489728 TRIM35Q9UPQ4 493 aa14.53□□□□□ -0.08
CPSF7-212ENST00000489728 ADRA2BP18089 450 aa14.52□□□□□ -0.09
CPSF7-212ENST00000489728 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.09
CPSF7-212ENST00000489728 COL24A1Q17RW2 1714 aa14.52□□□□□ -0.09
CPSF7-212ENST00000489728 STARD3NLO95772 234 aa14.51□□□□□ -0.09
CPSF7-212ENST00000489728 RRP7AQ9Y3A4 280 aaKnown RBP14.51□□□□□ -0.09
CPSF7-212ENST00000489728 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
CPSF7-212ENST00000489728 CYP19A1P11511 503 aaPredicted RBP14.5□□□□□ -0.09
CPSF7-212ENST00000489728 CRKLP46109 303 aaKnown RBP14.5□□□□□ -0.09
CPSF7-212ENST00000489728 NEUROD2Q15784 382 aa14.5□□□□□ -0.09
CPSF7-212ENST00000489728 THUMPD2Q9BTF0 503 aaKnown RBP14.5□□□□□ -0.09
CPSF7-212ENST00000489728 MTFR1LQ9H019 292 aa14.5□□□□□ -0.09
CPSF7-212ENST00000489728 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
CPSF7-212ENST00000489728 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
CPSF7-212ENST00000489728 GNPATO15228 680 aa14.49□□□□□ -0.09
CPSF7-212ENST00000489728 RPS6KA4O75676 772 aa14.49□□□□□ -0.09
CPSF7-212ENST00000489728 SNRPA1P09661 255 aaKnown RBP14.49□□□□□ -0.09
CPSF7-212ENST00000489728 DNAJC10Q8IXB1 793 aa14.49□□□□□ -0.09
CPSF7-212ENST00000489728 SPON1Q9HCB6 807 aa14.49□□□□□ -0.09
CPSF7-212ENST00000489728 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
CPSF7-212ENST00000489728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.48□□□□□ -0.09
CPSF7-212ENST00000489728 CHL1O00533 1208 aa14.48□□□□□ -0.09
CPSF7-212ENST00000489728 FAM9BQ8IZU0 186 aa14.48□□□□□ -0.09
CPSF7-212ENST00000489728 TSPYL4Q9UJ04 414 aa14.48□□□□□ -0.09
CPSF7-212ENST00000489728 KCNQ3O43525 872 aa14.47□□□□□ -0.09
CPSF7-212ENST00000489728 EIF4A1P60842 406 aaKnown RBP14.47□□□□□ -0.09
CPSF7-212ENST00000489728 INTS5Q6P9B9 1019 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms