RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 FHDC1Q9C0D6 1143 aaPredicted RBP23.91■■□□□ 1.42
ABCF3-217ENST00000489719 KDM6AO15550 1401 aaPredicted RBP23.91■■□□□ 1.42
ABCF3-217ENST00000489719 ITPK1Q13572 414 aa23.9■■□□□ 1.42
ABCF3-217ENST00000489719 LGR6Q9HBX8 967 aa23.9■■□□□ 1.42
ABCF3-217ENST00000489719 TOGARAM1Q9Y4F4 1720 aa23.9■■□□□ 1.42
ABCF3-217ENST00000489719 SYT17Q9BSW7 474 aa23.89■■□□□ 1.41
ABCF3-217ENST00000489719 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
ABCF3-217ENST00000489719 PTCD1O75127 700 aaKnown RBP23.88■■□□□ 1.41
ABCF3-217ENST00000489719 PHF14O94880 888 aa23.88■■□□□ 1.41
ABCF3-217ENST00000489719 ITGB4P16144 1822 aa23.87■■□□□ 1.41
ABCF3-217ENST00000489719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.87■■□□□ 1.41
ABCF3-217ENST00000489719 U2AF1L5P0DN76 240 aaPredicted RBP23.87■■□□□ 1.41
ABCF3-217ENST00000489719 U2AF1Q01081 240 aaKnown RBP eCLIP23.87■■□□□ 1.41
ABCF3-217ENST00000489719 GAS2L2Q8NHY3 880 aa23.87■■□□□ 1.41
ABCF3-217ENST00000489719 SLC52A2Q9HAB3 445 aa23.87■■□□□ 1.41
ABCF3-217ENST00000489719 GNPATO15228 680 aa23.86■■□□□ 1.41
ABCF3-217ENST00000489719 SSFA2P28290 1259 aa23.86■■□□□ 1.41
ABCF3-217ENST00000489719 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
ABCF3-217ENST00000489719 SLC4A9Q96Q91 983 aa23.85■■□□□ 1.41
ABCF3-217ENST00000489719 COL3A1P02461 1466 aaPredicted RBP23.84■■□□□ 1.41
ABCF3-217ENST00000489719 DDX10Q13206 875 aaKnown RBP23.84■■□□□ 1.41
ABCF3-217ENST00000489719 MSL1Q68DK7 614 aa23.84■■□□□ 1.41
ABCF3-217ENST00000489719 SMIM5Q71RC9 77 aa23.84■■□□□ 1.41
ABCF3-217ENST00000489719 GNAT3A8MTJ3 354 aa23.83■■□□□ 1.41
ABCF3-217ENST00000489719 PRKAR2BP31323 418 aa23.83■■□□□ 1.41
ABCF3-217ENST00000489719 RC3H1Q5TC82 1133 aaKnown RBP23.83■■□□□ 1.41
ABCF3-217ENST00000489719 RTCBQ9Y3I0 505 aaKnown RBP23.83■■□□□ 1.41
ABCF3-217ENST00000489719 FCHSD2O94868 740 aa23.82■■□□□ 1.4
ABCF3-217ENST00000489719 TRAPPC3LQ5T215 181 aa23.82■■□□□ 1.4
ABCF3-217ENST00000489719 AMIGO3Q86WK7 504 aa23.82■■□□□ 1.4
ABCF3-217ENST00000489719 RSPH6AQ9H0K4 717 aa23.81■■□□□ 1.4
ABCF3-217ENST00000489719 PHACTR3Q96KR7 559 aa23.8■■□□□ 1.4
ABCF3-217ENST00000489719 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
ABCF3-217ENST00000489719 TEFQ10587 303 aa23.79■■□□□ 1.4
ABCF3-217ENST00000489719 SLC39A6Q13433 755 aa23.79■■□□□ 1.4
ABCF3-217ENST00000489719 C5P01031 1676 aa23.79■■□□□ 1.4
ABCF3-217ENST00000489719 RPS6KA4O75676 772 aa23.78■■□□□ 1.4
ABCF3-217ENST00000489719 RALBP1Q15311 655 aa23.78■■□□□ 1.4
ABCF3-217ENST00000489719 IL17REQ8NFR9 667 aa23.78■■□□□ 1.4
ABCF3-217ENST00000489719 C4BP0C0L5 1744 aa23.78■■□□□ 1.4
ABCF3-217ENST00000489719 QSER1Q2KHR3 1735 aa23.77■■□□□ 1.4
ABCF3-217ENST00000489719 NEFMP07197 916 aa23.77■■□□□ 1.4
ABCF3-217ENST00000489719 CNTNAP4Q9C0A0 1308 aa23.77■■□□□ 1.4
ABCF3-217ENST00000489719 MAP3K5Q99683 1374 aa23.77■■□□□ 1.4
ABCF3-217ENST00000489719 ADRA2BP18089 450 aa23.76■■□□□ 1.39
ABCF3-217ENST00000489719 RFC4P35249 363 aa23.75■■□□□ 1.39
ABCF3-217ENST00000489719 TTC5Q8N0Z6 440 aa23.75■■□□□ 1.39
ABCF3-217ENST00000489719 RTF1Q92541 710 aaKnown RBP23.75■■□□□ 1.39
ABCF3-217ENST00000489719 ARHGEF1Q92888 912 aaKnown RBP23.75■■□□□ 1.39
ABCF3-217ENST00000489719 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
ABCF3-217ENST00000489719 DNAJC10Q8IXB1 793 aa23.73■■□□□ 1.39
ABCF3-217ENST00000489719 GPR162Q16538 588 aa23.72■■□□□ 1.39
ABCF3-217ENST00000489719 NLGN1Q8N2Q7 840 aa23.72■■□□□ 1.39
ABCF3-217ENST00000489719 PNNQ9H307 717 aaKnown RBP23.72■■□□□ 1.39
ABCF3-217ENST00000489719 TAF1LQ8IZX4 1826 aa23.72■■□□□ 1.39
ABCF3-217ENST00000489719 VSIG10Q8N0Z9 540 aa23.71■■□□□ 1.39
ABCF3-217ENST00000489719 CD2APQ9Y5K6 639 aa23.71■■□□□ 1.39
ABCF3-217ENST00000489719 TUBGCP6Q96RT7 1819 aa23.7■■□□□ 1.39
ABCF3-217ENST00000489719 YY1P25490 414 aa23.69■■□□□ 1.38
ABCF3-217ENST00000489719 INTS5Q6P9B9 1019 aaKnown RBP23.69■■□□□ 1.38
ABCF3-217ENST00000489719 PELP1Q8IZL8 1130 aaKnown RBP23.69■■□□□ 1.38
ABCF3-217ENST00000489719 NLGN2Q8NFZ4 835 aa23.69■■□□□ 1.38
ABCF3-217ENST00000489719 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
ABCF3-217ENST00000489719 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
ABCF3-217ENST00000489719 HTATSF1O43719 755 aaKnown RBP23.68■■□□□ 1.38
ABCF3-217ENST00000489719 CYP19A1P11511 503 aaPredicted RBP23.68■■□□□ 1.38
ABCF3-217ENST00000489719 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
ABCF3-217ENST00000489719 STARD3NLO95772 234 aa23.67■■□□□ 1.38
ABCF3-217ENST00000489719 TEX13AQ9BXU3 409 aaPredicted RBP23.67■■□□□ 1.38
ABCF3-217ENST00000489719 SCN11AQ9UI33 1791 aa23.67■■□□□ 1.38
ABCF3-217ENST00000489719 MMP10P09238 476 aa23.66■■□□□ 1.38
ABCF3-217ENST00000489719 MCM10Q7L590 875 aa23.66■■□□□ 1.38
ABCF3-217ENST00000489719 MRC1P22897 1456 aa23.66■■□□□ 1.38
ABCF3-217ENST00000489719 ZNF496Q96IT1 587 aaPredicted RBP23.65■■□□□ 1.38
ABCF3-217ENST00000489719 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
ABCF3-217ENST00000489719 CEMIPQ8WUJ3 1361 aa23.65■■□□□ 1.38
ABCF3-217ENST00000489719 GYS1P13807 737 aa23.64■■□□□ 1.37
ABCF3-217ENST00000489719 ZNF831Q5JPB2 1677 aa23.64■■□□□ 1.37
ABCF3-217ENST00000489719 MYBBP1AQ9BQG0 1328 aaKnown RBP23.63■■□□□ 1.37
ABCF3-217ENST00000489719 ZPR1O75312 459 aa23.63■■□□□ 1.37
ABCF3-217ENST00000489719 UBR3Q6ZT12 1888 aa23.63■■□□□ 1.37
ABCF3-217ENST00000489719 DCTN1Q14203 1278 aa23.62■■□□□ 1.37
ABCF3-217ENST00000489719 PLEKHF1Q96S99 279 aa23.62■■□□□ 1.37
ABCF3-217ENST00000489719 SRP68Q9UHB9 627 aaKnown RBP23.62■■□□□ 1.37
ABCF3-217ENST00000489719 PARP3Q9Y6F1 533 aa23.62■■□□□ 1.37
ABCF3-217ENST00000489719 COL24A1Q17RW2 1714 aa23.62■■□□□ 1.37
ABCF3-217ENST00000489719 MAPK8IP3Q9UPT6 1336 aa23.61■■□□□ 1.37
ABCF3-217ENST00000489719 CANXP27824 592 aaKnown RBP23.61■■□□□ 1.37
ABCF3-217ENST00000489719 TAF7Q15545 349 aaPredicted RBP23.6■■□□□ 1.37
ABCF3-217ENST00000489719 ZBTB1Q9Y2K1 713 aa23.6■■□□□ 1.37
ABCF3-217ENST00000489719 HEG1Q9ULI3 1381 aa23.6■■□□□ 1.37
ABCF3-217ENST00000489719 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
ABCF3-217ENST00000489719 KCNQ3O43525 872 aa23.59■■□□□ 1.37
ABCF3-217ENST00000489719 GRIN3BO60391 1043 aa23.59■■□□□ 1.37
ABCF3-217ENST00000489719 NFE2L2Q16236 605 aa23.59■■□□□ 1.37
ABCF3-217ENST00000489719 USP42Q9H9J4 1324 aaKnown RBP23.59■■□□□ 1.37
ABCF3-217ENST00000489719 ADAMTS7Q9UKP4 1686 aa23.58■■□□□ 1.37
ABCF3-217ENST00000489719 FKBP8Q14318 412 aa23.58■■□□□ 1.37
ABCF3-217ENST00000489719 NPM2Q86SE8 214 aaKnown RBP23.58■■□□□ 1.37
ABCF3-217ENST00000489719 KCPQ6ZWJ8 1503 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms