RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MCM10Q7L590 875 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 PROM2Q8N271 834 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 NFATC2IPQ8NCF5 419 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 IL17REQ8NFR9 667 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 ASAP1Q9ULH1 1129 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 CEMIPQ8WUJ3 1361 aa19.06■□□□□ 0.64
HLA-F-229ENST00000489502 C5P01031 1676 aa19.05■□□□□ 0.64
HLA-F-229ENST00000489502 RTF1Q92541 710 aaKnown RBP19.04■□□□□ 0.64
HLA-F-229ENST00000489502 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
HLA-F-229ENST00000489502 TAF1LQ8IZX4 1826 aa19.03■□□□□ 0.64
HLA-F-229ENST00000489502 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
HLA-F-229ENST00000489502 TMPOP42166 694 aaKnown RBP19.03■□□□□ 0.64
HLA-F-229ENST00000489502 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
HLA-F-229ENST00000489502 THUMPD2Q9BTF0 503 aaKnown RBP19.03■□□□□ 0.64
HLA-F-229ENST00000489502 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
HLA-F-229ENST00000489502 LRRC4BQ9NT99 713 aa19.03■□□□□ 0.64
HLA-F-229ENST00000489502 UBR2Q8IWV8 1755 aa19.03■□□□□ 0.64
HLA-F-229ENST00000489502 KCPQ6ZWJ8 1503 aa19.02■□□□□ 0.64
HLA-F-229ENST00000489502 TEFQ10587 303 aa19.02■□□□□ 0.64
HLA-F-229ENST00000489502 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
HLA-F-229ENST00000489502 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
HLA-F-229ENST00000489502 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
HLA-F-229ENST00000489502 RIPK4P57078 832 aa19.01■□□□□ 0.63
HLA-F-229ENST00000489502 SLC39A6Q13433 755 aa19.01■□□□□ 0.63
HLA-F-229ENST00000489502 MIER1Q8N108 512 aa19.01■□□□□ 0.63
HLA-F-229ENST00000489502 TJP1Q07157 1748 aa19■□□□□ 0.63
HLA-F-229ENST00000489502 APAF1O14727 1248 aa19■□□□□ 0.63
HLA-F-229ENST00000489502 HTATSF1O43719 755 aaKnown RBP19■□□□□ 0.63
HLA-F-229ENST00000489502 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
HLA-F-229ENST00000489502 KDM3BQ7LBC6 1761 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 C4BP0C0L5 1744 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 COL5A3P25940 1745 aaPredicted RBP18.98■□□□□ 0.63
HLA-F-229ENST00000489502 LOC102724428A0A0B4J2F2 783 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
HLA-F-229ENST00000489502 SIK1P57059 783 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 SLC27A3Q5K4L6 730 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 RBM42Q9BTD8 480 aaKnown RBP18.98■□□□□ 0.63
HLA-F-229ENST00000489502 CICQ96RK0 1608 aaPredicted RBP18.98■□□□□ 0.63
HLA-F-229ENST00000489502 ZNF831Q5JPB2 1677 aa18.98■□□□□ 0.63
HLA-F-229ENST00000489502 PSDA5PKW4 1024 aaPredicted RBP18.97■□□□□ 0.63
HLA-F-229ENST00000489502 ZNF827Q17R98 1081 aa18.97■□□□□ 0.63
HLA-F-229ENST00000489502 SLC4A9Q96Q91 983 aa18.97■□□□□ 0.63
HLA-F-229ENST00000489502 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
HLA-F-229ENST00000489502 ITPK1Q13572 414 aa18.96■□□□□ 0.63
HLA-F-229ENST00000489502 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
HLA-F-229ENST00000489502 TRIM35Q9UPQ4 493 aa18.96■□□□□ 0.63
HLA-F-229ENST00000489502 BTBD11A6QL63 1104 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 KCNQ3O43525 872 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 TTC5Q8N0Z6 440 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 LINC00116Q8NCU8 138 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 STK32BQ9NY57 414 aa18.94■□□□□ 0.62
HLA-F-229ENST00000489502 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
HLA-F-229ENST00000489502 MIS18AQ9NYP9 233 aa18.93■□□□□ 0.62
HLA-F-229ENST00000489502 QSER1Q2KHR3 1735 aa18.92■□□□□ 0.62
HLA-F-229ENST00000489502 CASZ1Q86V15 1759 aa18.92■□□□□ 0.62
HLA-F-229ENST00000489502 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
HLA-F-229ENST00000489502 UBR3Q6ZT12 1888 aa18.92■□□□□ 0.62
HLA-F-229ENST00000489502 TAF7Q15545 349 aaPredicted RBP18.91■□□□□ 0.62
HLA-F-229ENST00000489502 SLC15A2Q16348 729 aa18.91■□□□□ 0.62
HLA-F-229ENST00000489502 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
HLA-F-229ENST00000489502 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
HLA-F-229ENST00000489502 HEG1Q9ULI3 1381 aa18.9■□□□□ 0.62
HLA-F-229ENST00000489502 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
HLA-F-229ENST00000489502 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
HLA-F-229ENST00000489502 LAMB4A4D0S4 1761 aa18.88■□□□□ 0.61
HLA-F-229ENST00000489502 AK7Q96M32 723 aa18.88■□□□□ 0.61
HLA-F-229ENST00000489502 FMNL2Q96PY5 1086 aa18.88■□□□□ 0.61
HLA-F-229ENST00000489502 SMIM5Q71RC9 77 aa18.87■□□□□ 0.61
HLA-F-229ENST00000489502 AMIGO3Q86WK7 504 aa18.87■□□□□ 0.61
HLA-F-229ENST00000489502 PDGFDQ9GZP0 370 aaPredicted RBP18.87■□□□□ 0.61
HLA-F-229ENST00000489502 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
HLA-F-229ENST00000489502 LAS1LQ9Y4W2 734 aaKnown RBP18.87■□□□□ 0.61
HLA-F-229ENST00000489502 PNPLA7Q6ZV29 1317 aa18.86■□□□□ 0.61
HLA-F-229ENST00000489502 TFCP2L1Q9NZI6 479 aa18.86■□□□□ 0.61
HLA-F-229ENST00000489502 CNTNAP4Q9C0A0 1308 aa18.85■□□□□ 0.61
HLA-F-229ENST00000489502 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
HLA-F-229ENST00000489502 GNPATO15228 680 aa18.85■□□□□ 0.61
HLA-F-229ENST00000489502 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
HLA-F-229ENST00000489502 PHF14O94880 888 aa18.84■□□□□ 0.61
HLA-F-229ENST00000489502 CRKLP46109 303 aaKnown RBP18.84■□□□□ 0.61
HLA-F-229ENST00000489502 VSIG10Q8N0Z9 540 aa18.84■□□□□ 0.61
HLA-F-229ENST00000489502 EIF4A1P60842 406 aaKnown RBP18.83■□□□□ 0.6
HLA-F-229ENST00000489502 CCDC27Q2M243 656 aa18.83■□□□□ 0.6
HLA-F-229ENST00000489502 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
HLA-F-229ENST00000489502 CYP19A1P11511 503 aaPredicted RBP18.82■□□□□ 0.6
HLA-F-229ENST00000489502 CHL1O00533 1208 aa18.81■□□□□ 0.6
HLA-F-229ENST00000489502 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
HLA-F-229ENST00000489502 CCDC87Q9NVE4 849 aa18.81■□□□□ 0.6
HLA-F-229ENST00000489502 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
HLA-F-229ENST00000489502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.8■□□□□ 0.6
HLA-F-229ENST00000489502 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
HLA-F-229ENST00000489502 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
HLA-F-229ENST00000489502 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
HLA-F-229ENST00000489502 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
HLA-F-229ENST00000489502 MBIPQ9NS73 344 aa18.8■□□□□ 0.6
HLA-F-229ENST00000489502 IFT57Q9NWB7 429 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms