RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 ONECUT3O60422 494 aaPredicted RBP19.65■□□□□ 0.74
CTNS-206ENST00000488623 A0A0G2JS52 829 aa19.64■□□□□ 0.73
CTNS-206ENST00000488623 MYT1Q01538 1121 aa19.64■□□□□ 0.73
CTNS-206ENST00000488623 EXOSC9Q06265 439 aaKnown RBP19.64■□□□□ 0.73
CTNS-206ENST00000488623 DDB1Q16531 1140 aa19.64■□□□□ 0.73
CTNS-206ENST00000488623 TEFQ10587 303 aa19.63■□□□□ 0.73
CTNS-206ENST00000488623 BABAM1Q9NWV8 329 aa19.63■□□□□ 0.73
CTNS-206ENST00000488623 CCDC125Q86Z20 511 aa19.62■□□□□ 0.73
CTNS-206ENST00000488623 TSPYL4Q9UJ04 414 aa19.62■□□□□ 0.73
CTNS-206ENST00000488623 TNS2Q63HR2 1409 aa19.61■□□□□ 0.73
CTNS-206ENST00000488623 KRT27Q7Z3Y8 459 aa19.61■□□□□ 0.73
CTNS-206ENST00000488623 SLC52A2Q9HAB3 445 aa19.61■□□□□ 0.73
CTNS-206ENST00000488623 RCAN3Q9UKA8 241 aa19.61■□□□□ 0.73
CTNS-206ENST00000488623 THSD7AQ9UPZ6 1657 aa19.61■□□□□ 0.73
CTNS-206ENST00000488623 MARCH10Q8NA82 808 aaPredicted RBP19.6■□□□□ 0.73
CTNS-206ENST00000488623 NFATC2IPQ8NCF5 419 aa19.6■□□□□ 0.73
CTNS-206ENST00000488623 SIPA1L3O60292 1781 aaPredicted RBP19.6■□□□□ 0.73
CTNS-206ENST00000488623 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
CTNS-206ENST00000488623 ERVV-2B6SEH9 535 aa19.59■□□□□ 0.73
CTNS-206ENST00000488623 C8orf58Q8NAV2 365 aa19.59■□□□□ 0.73
CTNS-206ENST00000488623 SUPT16HQ9Y5B9 1047 aaKnown RBP19.59■□□□□ 0.73
CTNS-206ENST00000488623 KCNQ3O43525 872 aa19.58■□□□□ 0.72
CTNS-206ENST00000488623 CABP4P57796 275 aa19.58■□□□□ 0.72
CTNS-206ENST00000488623 TSPYL6Q8N831 410 aa19.58■□□□□ 0.72
CTNS-206ENST00000488623 MRC1P22897 1456 aa19.57■□□□□ 0.72
CTNS-206ENST00000488623 KRT24Q2M2I5 525 aa19.57■□□□□ 0.72
CTNS-206ENST00000488623 VAMP4O75379 141 aa19.56■□□□□ 0.72
CTNS-206ENST00000488623 CT47B1P0C2W7 299 aaPredicted RBP19.56■□□□□ 0.72
CTNS-206ENST00000488623 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
CTNS-206ENST00000488623 TOGARAM1Q9Y4F4 1720 aa19.55■□□□□ 0.72
CTNS-206ENST00000488623 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
CTNS-206ENST00000488623 EIF4A1P60842 406 aaKnown RBP19.54■□□□□ 0.72
CTNS-206ENST00000488623 SLC39A6Q13433 755 aa19.54■□□□□ 0.72
CTNS-206ENST00000488623 RARSP54136 660 aaKnown RBP19.53■□□□□ 0.72
CTNS-206ENST00000488623 SF3B2Q13435 895 aaKnown RBP19.53■□□□□ 0.72
CTNS-206ENST00000488623 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
CTNS-206ENST00000488623 RNF123Q5XPI4 1314 aa19.52■□□□□ 0.72
CTNS-206ENST00000488623 BCAR3O75815 825 aa19.52■□□□□ 0.72
CTNS-206ENST00000488623 ITGB4P16144 1822 aa19.52■□□□□ 0.72
CTNS-206ENST00000488623 KAT6BQ8WYB5 2073 aa19.52■□□□□ 0.71
CTNS-206ENST00000488623 ZNF790Q6PG37 636 aa19.51■□□□□ 0.71
CTNS-206ENST00000488623 DEFB132Q7Z7B7 95 aa19.51■□□□□ 0.71
CTNS-206ENST00000488623 PIGBQ92521 554 aa19.51■□□□□ 0.71
CTNS-206ENST00000488623 PRIM1P49642 420 aaKnown RBP19.5■□□□□ 0.71
CTNS-206ENST00000488623 FAM182BQ5T319 152 aa19.5■□□□□ 0.71
CTNS-206ENST00000488623 TMOD3Q9NYL9 352 aa19.5■□□□□ 0.71
CTNS-206ENST00000488623 TNS1Q9HBL0 1735 aaKnown RBP19.49■□□□□ 0.71
CTNS-206ENST00000488623 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
CTNS-206ENST00000488623 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
CTNS-206ENST00000488623 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
CTNS-206ENST00000488623 ACSBG1Q96GR2 724 aa19.48■□□□□ 0.71
CTNS-206ENST00000488623 ALDH1L2Q3SY69 923 aa19.47■□□□□ 0.71
CTNS-206ENST00000488623 BCL2L13Q9BXK5 485 aa19.47■□□□□ 0.71
CTNS-206ENST00000488623 DOT1LQ8TEK3 1739 aa19.47■□□□□ 0.71
CTNS-206ENST00000488623 BCL9O00512 1426 aa19.46■□□□□ 0.71
CTNS-206ENST00000488623 RRP1P56182 461 aaKnown RBP19.46■□□□□ 0.71
CTNS-206ENST00000488623 SYTL4Q96C24 671 aaPredicted RBP19.46■□□□□ 0.71
CTNS-206ENST00000488623 ZNF496Q96IT1 587 aaPredicted RBP19.46■□□□□ 0.71
CTNS-206ENST00000488623 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
CTNS-206ENST00000488623 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
CTNS-206ENST00000488623 TCERG1O14776 1098 aaKnown RBP19.45■□□□□ 0.7
CTNS-206ENST00000488623 PLIN1O60240 522 aa19.45■□□□□ 0.7
CTNS-206ENST00000488623 GIGYF1O75420 1035 aaPredicted RBP19.45■□□□□ 0.7
CTNS-206ENST00000488623 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
CTNS-206ENST00000488623 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
CTNS-206ENST00000488623 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
CTNS-206ENST00000488623 ASAP1Q9ULH1 1129 aa19.45■□□□□ 0.7
CTNS-206ENST00000488623 KCNQ2O43526 872 aa19.44■□□□□ 0.7
CTNS-206ENST00000488623 BAG6P46379 1132 aa19.44■□□□□ 0.7
CTNS-206ENST00000488623 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
CTNS-206ENST00000488623 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
CTNS-206ENST00000488623 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
CTNS-206ENST00000488623 HOXB7P09629 217 aa19.43■□□□□ 0.7
CTNS-206ENST00000488623 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
CTNS-206ENST00000488623 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
CTNS-206ENST00000488623 UBR2Q8IWV8 1755 aa19.42■□□□□ 0.7
CTNS-206ENST00000488623 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
CTNS-206ENST00000488623 FAM196AQ6ZSG2 479 aa19.41■□□□□ 0.7
CTNS-206ENST00000488623 NECTIN2Q92692 538 aa19.41■□□□□ 0.7
CTNS-206ENST00000488623 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
CTNS-206ENST00000488623 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
CTNS-206ENST00000488623 PTCD1O75127 700 aaKnown RBP19.4■□□□□ 0.7
CTNS-206ENST00000488623 SNRPA1P09661 255 aaKnown RBP19.4■□□□□ 0.7
CTNS-206ENST00000488623 IRX6P78412 446 aaPredicted RBP19.4■□□□□ 0.7
CTNS-206ENST00000488623 HDGFL1Q5TGJ6 251 aa19.4■□□□□ 0.7
CTNS-206ENST00000488623 CCDC30Q5VVM6 783 aa19.4■□□□□ 0.7
CTNS-206ENST00000488623 PTF1AQ7RTS3 328 aa19.4■□□□□ 0.7
CTNS-206ENST00000488623 NOB1Q9ULX3 412 aaKnown RBP19.4■□□□□ 0.7
CTNS-206ENST00000488623 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.39■□□□□ 0.69
CTNS-206ENST00000488623 FRAT1Q92837 279 aaPredicted RBP19.39■□□□□ 0.69
CTNS-206ENST00000488623 USP16Q9Y5T5 823 aa19.39■□□□□ 0.69
CTNS-206ENST00000488623 TRIM37O94972 964 aa19.38■□□□□ 0.69
CTNS-206ENST00000488623 C5P01031 1676 aa19.38■□□□□ 0.69
CTNS-206ENST00000488623 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
CTNS-206ENST00000488623 EN1Q05925 392 aaPredicted RBP19.38■□□□□ 0.69
CTNS-206ENST00000488623 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
CTNS-206ENST00000488623 RBM42Q9BTD8 480 aaKnown RBP19.37■□□□□ 0.69
CTNS-206ENST00000488623 TNNQ9UQP3 1299 aa19.37■□□□□ 0.69
CTNS-206ENST00000488623 NEFLP07196 543 aa19.36■□□□□ 0.69
CTNS-206ENST00000488623 FKBP8Q14318 412 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms