RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 QSER1Q2KHR3 1735 aa31.25■■■□□ 2.59
STRADB-209ENST00000488196 RNMTO43148 476 aaKnown RBP31.24■■■□□ 2.59
STRADB-209ENST00000488196 RALBP1Q15311 655 aa31.24■■■□□ 2.59
STRADB-209ENST00000488196 PHACTR3Q96KR7 559 aa31.24■■■□□ 2.59
STRADB-209ENST00000488196 ATP6V1AP38606 617 aa31.22■■■□□ 2.59
STRADB-209ENST00000488196 ITPK1Q13572 414 aa31.22■■■□□ 2.59
STRADB-209ENST00000488196 MTFR1LQ9H019 292 aa31.22■■■□□ 2.59
STRADB-209ENST00000488196 LINC00116Q8NCU8 138 aa31.21■■■□□ 2.59
STRADB-209ENST00000488196 GAS2L2Q8NHY3 880 aa31.21■■■□□ 2.59
STRADB-209ENST00000488196 RBM42Q9BTD8 480 aaKnown RBP31.21■■■□□ 2.59
STRADB-209ENST00000488196 C4BP0C0L5 1744 aa31.21■■■□□ 2.59
STRADB-209ENST00000488196 PTGER2P43116 358 aa31.2■■■□□ 2.59
STRADB-209ENST00000488196 SLC4A9Q96Q91 983 aa31.2■■■□□ 2.59
STRADB-209ENST00000488196 SLC52A2Q9HAB3 445 aa31.2■■■□□ 2.59
STRADB-209ENST00000488196 PPP1R1BQ9UD71 204 aaPredicted RBP31.19■■■□□ 2.58
STRADB-209ENST00000488196 FCHSD2O94868 740 aa31.18■■■□□ 2.58
STRADB-209ENST00000488196 ADAMTS7Q9UKP4 1686 aa31.17■■■□□ 2.58
STRADB-209ENST00000488196 HMGB2P26583 209 aaKnown RBP31.17■■■□□ 2.58
STRADB-209ENST00000488196 COL23A1Q86Y22 540 aaPredicted RBP31.17■■■□□ 2.58
STRADB-209ENST00000488196 AK7Q96M32 723 aa31.17■■■□□ 2.58
STRADB-209ENST00000488196 MAP3K5Q99683 1374 aa31.17■■■□□ 2.58
STRADB-209ENST00000488196 GNAT3A8MTJ3 354 aa31.16■■■□□ 2.58
STRADB-209ENST00000488196 MSH5O43196 834 aa31.16■■■□□ 2.58
STRADB-209ENST00000488196 PTCD1O75127 700 aaKnown RBP31.16■■■□□ 2.58
STRADB-209ENST00000488196 MRC1P22897 1456 aa31.15■■■□□ 2.58
STRADB-209ENST00000488196 SMIM5Q71RC9 77 aa31.15■■■□□ 2.58
STRADB-209ENST00000488196 AMIGO3Q86WK7 504 aa31.15■■■□□ 2.58
STRADB-209ENST00000488196 IL17REQ8NFR9 667 aa31.14■■■□□ 2.58
STRADB-209ENST00000488196 SLC16A10Q8TF71 515 aa31.14■■■□□ 2.58
STRADB-209ENST00000488196 SGIP1Q9BQI5 828 aa31.13■■■□□ 2.57
STRADB-209ENST00000488196 UBR3Q6ZT12 1888 aa31.12■■■□□ 2.57
STRADB-209ENST00000488196 SLC39A6Q13433 755 aa31.12■■■□□ 2.57
STRADB-209ENST00000488196 MYBBP1AQ9BQG0 1328 aaKnown RBP31.12■■■□□ 2.57
STRADB-209ENST00000488196 ZNF831Q5JPB2 1677 aa31.1■■■□□ 2.57
STRADB-209ENST00000488196 PHF14O94880 888 aa31.1■■■□□ 2.57
STRADB-209ENST00000488196 ZNF316A6NFI3 1004 aaPredicted RBP31.08■■■□□ 2.57
STRADB-209ENST00000488196 GNPATO15228 680 aa31.08■■■□□ 2.57
STRADB-209ENST00000488196 FLAD1Q8NFF5 587 aa31.08■■■□□ 2.57
STRADB-209ENST00000488196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.07■■■□□ 2.56
STRADB-209ENST00000488196 PRKRIP1Q9H875 184 aaPredicted RBP31.07■■■□□ 2.56
STRADB-209ENST00000488196 COL5A3P25940 1745 aaPredicted RBP31.07■■■□□ 2.56
STRADB-209ENST00000488196 TEFQ10587 303 aa31.06■■■□□ 2.56
STRADB-209ENST00000488196 MYH14Q7Z406 1995 aaKnown RBP31.05■■■□□ 2.56
STRADB-209ENST00000488196 MSL1Q68DK7 614 aa31.05■■■□□ 2.56
STRADB-209ENST00000488196 COL24A1Q17RW2 1714 aa31.04■■■□□ 2.56
STRADB-209ENST00000488196 PLEKHF1Q96S99 279 aa31.04■■■□□ 2.56
STRADB-209ENST00000488196 CEMIPQ8WUJ3 1361 aa31.04■■■□□ 2.56
STRADB-209ENST00000488196 SIPA1L3O60292 1781 aaPredicted RBP31.03■■■□□ 2.56
STRADB-209ENST00000488196 SSFA2P28290 1259 aa31.03■■■□□ 2.56
STRADB-209ENST00000488196 ARXQ96QS3 562 aa31.03■■■□□ 2.56
STRADB-209ENST00000488196 TJP1Q07157 1748 aa31.03■■■□□ 2.56
STRADB-209ENST00000488196 RC3H1Q5TC82 1133 aaKnown RBP31.02■■■□□ 2.56
STRADB-209ENST00000488196 MCM10Q7L590 875 aa31.02■■■□□ 2.56
STRADB-209ENST00000488196 CNTNAP4Q9C0A0 1308 aa31.01■■■□□ 2.56
STRADB-209ENST00000488196 POLD1P28340 1107 aa31.01■■■□□ 2.55
STRADB-209ENST00000488196 KCPQ6ZWJ8 1503 aa31.01■■■□□ 2.55
STRADB-209ENST00000488196 NEFMP07197 916 aa31■■■□□ 2.55
STRADB-209ENST00000488196 DCTN1Q14203 1278 aa31■■■□□ 2.55
STRADB-209ENST00000488196 DNAJC10Q8IXB1 793 aa31■■■□□ 2.55
STRADB-209ENST00000488196 RTF1Q92541 710 aaKnown RBP31■■■□□ 2.55
STRADB-209ENST00000488196 FHDC1Q9C0D6 1143 aaPredicted RBP31■■■□□ 2.55
STRADB-209ENST00000488196 DLG5Q8TDM6 1919 aa30.99■■■□□ 2.55
STRADB-209ENST00000488196 CRKLP46109 303 aaKnown RBP30.99■■■□□ 2.55
STRADB-209ENST00000488196 RTCBQ9Y3I0 505 aaKnown RBP30.99■■■□□ 2.55
STRADB-209ENST00000488196 UBR2Q8IWV8 1755 aa30.97■■■□□ 2.55
STRADB-209ENST00000488196 TTC5Q8N0Z6 440 aa30.97■■■□□ 2.55
STRADB-209ENST00000488196 CICQ96RK0 1608 aaPredicted RBP30.97■■■□□ 2.55
STRADB-209ENST00000488196 RPS6KA4O75676 772 aa30.96■■■□□ 2.55
STRADB-209ENST00000488196 ZNF790Q6PG37 636 aa30.96■■■□□ 2.55
STRADB-209ENST00000488196 PNNQ9H307 717 aaKnown RBP30.96■■■□□ 2.55
STRADB-209ENST00000488196 HTATSF1O43719 755 aaKnown RBP30.95■■■□□ 2.55
STRADB-209ENST00000488196 TRAPPC3LQ5T215 181 aa30.95■■■□□ 2.55
STRADB-209ENST00000488196 SYT17Q9BSW7 474 aa30.95■■■□□ 2.55
STRADB-209ENST00000488196 BTBD11A6QL63 1104 aa30.94■■■□□ 2.54
STRADB-209ENST00000488196 NFE2L2Q16236 605 aa30.94■■■□□ 2.54
STRADB-209ENST00000488196 MAPK8IP3Q9UPT6 1336 aa30.94■■■□□ 2.54
STRADB-209ENST00000488196 KCNQ3O43525 872 aa30.93■■■□□ 2.54
STRADB-209ENST00000488196 INTS5Q6P9B9 1019 aaKnown RBP30.93■■■□□ 2.54
STRADB-209ENST00000488196 ARHGEF1Q92888 912 aaKnown RBP30.93■■■□□ 2.54
STRADB-209ENST00000488196 ZNF496Q96IT1 587 aaPredicted RBP30.93■■■□□ 2.54
STRADB-209ENST00000488196 CYP19A1P11511 503 aaPredicted RBP30.92■■■□□ 2.54
STRADB-209ENST00000488196 VSIG10Q8N0Z9 540 aa30.92■■■□□ 2.54
STRADB-209ENST00000488196 KLHL34Q8N239 644 aa30.92■■■□□ 2.54
STRADB-209ENST00000488196 ADRA2BP18089 450 aa30.9■■■□□ 2.54
STRADB-209ENST00000488196 CCDC87Q9NVE4 849 aa30.9■■■□□ 2.54
STRADB-209ENST00000488196 WDR43Q15061 677 aaKnown RBP eCLIP30.89■■■□□ 2.54
STRADB-209ENST00000488196 CCDC146Q8IYE0 955 aa30.88■■■□□ 2.53
STRADB-209ENST00000488196 HEG1Q9ULI3 1381 aa30.88■■■□□ 2.53
STRADB-209ENST00000488196 RFC4P35249 363 aa30.87■■■□□ 2.53
STRADB-209ENST00000488196 FMNL2Q96PY5 1086 aa30.87■■■□□ 2.53
STRADB-209ENST00000488196 THUMPD2Q9BTF0 503 aaKnown RBP30.87■■■□□ 2.53
STRADB-209ENST00000488196 C4AP0C0L4 1744 aa30.87■■■□□ 2.53
STRADB-209ENST00000488196 ADAMTS8Q9UP79 889 aa30.86■■■□□ 2.53
STRADB-209ENST00000488196 ZBTB1Q9Y2K1 713 aa30.85■■■□□ 2.53
STRADB-209ENST00000488196 TAF7Q15545 349 aaPredicted RBP30.84■■■□□ 2.53
STRADB-209ENST00000488196 MIS18AQ9NYP9 233 aa30.84■■■□□ 2.53
STRADB-209ENST00000488196 SRP68Q9UHB9 627 aaKnown RBP30.83■■■□□ 2.53
STRADB-209ENST00000488196 SOS1Q07889 1333 aaPredicted RBP30.82■■■□□ 2.52
STRADB-209ENST00000488196 STARD3NLO95772 234 aa30.82■■■□□ 2.52
STRADB-209ENST00000488196 RIPK4P57078 832 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms