RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 RNMTO43148 476 aaKnown RBP17.35■□□□□ 0.37
COPS7B-221ENST00000488111 BCAR3O75815 825 aa17.35■□□□□ 0.37
COPS7B-221ENST00000488111 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
COPS7B-221ENST00000488111 DDX54Q8TDD1 881 aaKnown RBP17.35■□□□□ 0.37
COPS7B-221ENST00000488111 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
COPS7B-221ENST00000488111 TSPYL4Q9UJ04 414 aa17.34■□□□□ 0.37
COPS7B-221ENST00000488111 KRT24Q2M2I5 525 aa17.33■□□□□ 0.37
COPS7B-221ENST00000488111 TSPYL6Q8N831 410 aa17.33■□□□□ 0.37
COPS7B-221ENST00000488111 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.36
COPS7B-221ENST00000488111 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.36
COPS7B-221ENST00000488111 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
COPS7B-221ENST00000488111 TEFQ10587 303 aa17.32■□□□□ 0.36
COPS7B-221ENST00000488111 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-221ENST00000488111 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
COPS7B-221ENST00000488111 FNBP4Q8N3X1 1017 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-221ENST00000488111 USP21Q9UK80 565 aa17.32■□□□□ 0.36
COPS7B-221ENST00000488111 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
COPS7B-221ENST00000488111 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
COPS7B-221ENST00000488111 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
COPS7B-221ENST00000488111 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
COPS7B-221ENST00000488111 NRAPQ86VF7 1730 aa17.3■□□□□ 0.36
COPS7B-221ENST00000488111 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
COPS7B-221ENST00000488111 PCDH11XQ9BZA7 1347 aa17.3■□□□□ 0.36
COPS7B-221ENST00000488111 PCDH11YQ9BZA8 1340 aa17.3■□□□□ 0.36
COPS7B-221ENST00000488111 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
COPS7B-221ENST00000488111 VAMP4O75379 141 aa17.29■□□□□ 0.36
COPS7B-221ENST00000488111 TWISTNBQ3B726 338 aaPredicted RBP17.29■□□□□ 0.36
COPS7B-221ENST00000488111 BTBD11A6QL63 1104 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 KCNQ3O43525 872 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 DCAF5Q96JK2 942 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
COPS7B-221ENST00000488111 DISP2A7MBM2 1401 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 EXOC5O00471 708 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 NFATC2IPQ8NCF5 419 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 PKNOX2Q96KN3 472 aa17.28■□□□□ 0.36
COPS7B-221ENST00000488111 AFF2P51816 1311 aa17.27■□□□□ 0.36
COPS7B-221ENST00000488111 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
COPS7B-221ENST00000488111 VPS72Q15906 364 aa17.27■□□□□ 0.36
COPS7B-221ENST00000488111 FAM98CQ17RN3 349 aaKnown RBP17.27■□□□□ 0.36
COPS7B-221ENST00000488111 THRAP3Q9Y2W1 955 aaKnown RBP17.27■□□□□ 0.36
COPS7B-221ENST00000488111 LRRC37A3O60309 1634 aa17.27■□□□□ 0.36
COPS7B-221ENST00000488111 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.35
COPS7B-221ENST00000488111 HSP90AB1P08238 724 aaKnown RBP17.26■□□□□ 0.35
COPS7B-221ENST00000488111 L1TD1Q5T7N2 865 aaKnown RBP17.26■□□□□ 0.35
COPS7B-221ENST00000488111 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
COPS7B-221ENST00000488111 NWD2Q9ULI1 1742 aa17.26■□□□□ 0.35
COPS7B-221ENST00000488111 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-221ENST00000488111 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
COPS7B-221ENST00000488111 SMC4Q9NTJ3 1288 aa17.25■□□□□ 0.35
COPS7B-221ENST00000488111 CABP4P57796 275 aa17.24■□□□□ 0.35
COPS7B-221ENST00000488111 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
COPS7B-221ENST00000488111 DDB1Q16531 1140 aa17.24■□□□□ 0.35
COPS7B-221ENST00000488111 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
COPS7B-221ENST00000488111 NKX1-1Q15270 411 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-221ENST00000488111 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
COPS7B-221ENST00000488111 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
COPS7B-221ENST00000488111 A0A0G2JS52 829 aa17.23■□□□□ 0.35
COPS7B-221ENST00000488111 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
COPS7B-221ENST00000488111 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-221ENST00000488111 VIRMAQ69YN4 1812 aaKnown RBP17.23■□□□□ 0.35
COPS7B-221ENST00000488111 EIF4A1P60842 406 aaKnown RBP17.22■□□□□ 0.35
COPS7B-221ENST00000488111 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.22■□□□□ 0.35
COPS7B-221ENST00000488111 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
COPS7B-221ENST00000488111 RGS3P49796 1198 aa17.21■□□□□ 0.35
COPS7B-221ENST00000488111 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
COPS7B-221ENST00000488111 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.35
COPS7B-221ENST00000488111 ADAMTS7Q9UKP4 1686 aa17.2■□□□□ 0.34
COPS7B-221ENST00000488111 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
COPS7B-221ENST00000488111 FBXO41Q8TF61 875 aa17.2■□□□□ 0.34
COPS7B-221ENST00000488111 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-221ENST00000488111 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
COPS7B-221ENST00000488111 SCN11AQ9UI33 1791 aa17.19■□□□□ 0.34
COPS7B-221ENST00000488111 ERVV-2B6SEH9 535 aa17.19■□□□□ 0.34
COPS7B-221ENST00000488111 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
COPS7B-221ENST00000488111 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
COPS7B-221ENST00000488111 TNS2Q63HR2 1409 aa17.19■□□□□ 0.34
COPS7B-221ENST00000488111 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
COPS7B-221ENST00000488111 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
COPS7B-221ENST00000488111 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
COPS7B-221ENST00000488111 QTRT2Q9H974 415 aaKnown RBP17.18■□□□□ 0.34
COPS7B-221ENST00000488111 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
COPS7B-221ENST00000488111 BECN1Q14457 450 aa17.18■□□□□ 0.34
COPS7B-221ENST00000488111 TRPC5Q9UL62 973 aaPredicted RBP17.18■□□□□ 0.34
COPS7B-221ENST00000488111 EIF2S2P20042 333 aaKnown RBP17.17■□□□□ 0.34
COPS7B-221ENST00000488111 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
COPS7B-221ENST00000488111 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
COPS7B-221ENST00000488111 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
COPS7B-221ENST00000488111 ANTXR1Q9H6X2 564 aa17.16■□□□□ 0.34
COPS7B-221ENST00000488111 WNK3Q9BYP7 1800 aa17.16■□□□□ 0.34
COPS7B-221ENST00000488111 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
COPS7B-221ENST00000488111 TMOD3Q9NYL9 352 aa17.16■□□□□ 0.34
COPS7B-221ENST00000488111 CLCN1P35523 988 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 ACSBG1Q96GR2 724 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 MRC1P22897 1456 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
COPS7B-221ENST00000488111 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
COPS7B-221ENST00000488111 PIGBQ92521 554 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms