RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-216ENST00000488085 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
PSMD2-216ENST00000488085 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
PSMD2-216ENST00000488085 LOC102724428A0A0B4J2F2 783 aa11.85□□□□□ -0.51
PSMD2-216ENST00000488085 SIK1P57059 783 aa11.85□□□□□ -0.51
PSMD2-216ENST00000488085 TFCP2L1Q9NZI6 479 aa11.85□□□□□ -0.51
PSMD2-216ENST00000488085 C4AP0C0L4 1744 aa11.85□□□□□ -0.51
PSMD2-216ENST00000488085 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
PSMD2-216ENST00000488085 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
PSMD2-216ENST00000488085 ATF5Q9Y2D1 282 aaPredicted RBP11.84□□□□□ -0.51
PSMD2-216ENST00000488085 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
PSMD2-216ENST00000488085 ITPK1Q13572 414 aa11.83□□□□□ -0.52
PSMD2-216ENST00000488085 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
PSMD2-216ENST00000488085 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
PSMD2-216ENST00000488085 CHD4Q14839 1912 aa11.82□□□□□ -0.52
PSMD2-216ENST00000488085 CABP4P57796 275 aa11.82□□□□□ -0.52
PSMD2-216ENST00000488085 COL23A1Q86Y22 540 aaPredicted RBP11.82□□□□□ -0.52
PSMD2-216ENST00000488085 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
PSMD2-216ENST00000488085 RSPH6AQ9H0K4 717 aa11.82□□□□□ -0.52
PSMD2-216ENST00000488085 LGR6Q9HBX8 967 aa11.82□□□□□ -0.52
PSMD2-216ENST00000488085 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
PSMD2-216ENST00000488085 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
PSMD2-216ENST00000488085 AMIGO3Q86WK7 504 aa11.81□□□□□ -0.52
PSMD2-216ENST00000488085 FLAD1Q8NFF5 587 aa11.81□□□□□ -0.52
PSMD2-216ENST00000488085 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
PSMD2-216ENST00000488085 PPP1R1BQ9UD71 204 aaPredicted RBP11.81□□□□□ -0.52
PSMD2-216ENST00000488085 KCPQ6ZWJ8 1503 aa11.81□□□□□ -0.52
PSMD2-216ENST00000488085 UTRNP46939 3433 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 MAP3K5Q99683 1374 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 KIF13BQ9NQT8 1826 aa11.8□□□□□ -0.52
PSMD2-216ENST00000488085 FCHSD2O94868 740 aa11.79□□□□□ -0.52
PSMD2-216ENST00000488085 SSFA2P28290 1259 aa11.79□□□□□ -0.52
PSMD2-216ENST00000488085 ZEB1P37275 1124 aaPredicted RBP11.79□□□□□ -0.52
PSMD2-216ENST00000488085 DDX10Q13206 875 aaKnown RBP11.79□□□□□ -0.52
PSMD2-216ENST00000488085 RALBP1Q15311 655 aa11.79□□□□□ -0.52
PSMD2-216ENST00000488085 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
PSMD2-216ENST00000488085 AK7Q96M32 723 aa11.79□□□□□ -0.52
PSMD2-216ENST00000488085 CEMIPQ8WUJ3 1361 aa11.79□□□□□ -0.52
PSMD2-216ENST00000488085 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
PSMD2-216ENST00000488085 IL17REQ8NFR9 667 aa11.78□□□□□ -0.52
PSMD2-216ENST00000488085 ARXQ96QS3 562 aa11.78□□□□□ -0.52
PSMD2-216ENST00000488085 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
PSMD2-216ENST00000488085 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
PSMD2-216ENST00000488085 GOLGB1Q14789 3259 aaKnown RBP11.77□□□□□ -0.52
PSMD2-216ENST00000488085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.77□□□□□ -0.53
PSMD2-216ENST00000488085 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
PSMD2-216ENST00000488085 U2AF1L5P0DN76 240 aaPredicted RBP11.77□□□□□ -0.53
PSMD2-216ENST00000488085 U2AF1Q01081 240 aaKnown RBP eCLIP11.77□□□□□ -0.53
PSMD2-216ENST00000488085 SYT17Q9BSW7 474 aa11.77□□□□□ -0.53
PSMD2-216ENST00000488085 FHDC1Q9C0D6 1143 aaPredicted RBP11.77□□□□□ -0.53
PSMD2-216ENST00000488085 PTCD1O75127 700 aaKnown RBP11.76□□□□□ -0.53
PSMD2-216ENST00000488085 POLD1P28340 1107 aa11.76□□□□□ -0.53
PSMD2-216ENST00000488085 SMIM5Q71RC9 77 aa11.76□□□□□ -0.53
PSMD2-216ENST00000488085 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
PSMD2-216ENST00000488085 KIAA1551Q9HCM1 1747 aa11.75□□□□□ -0.53
PSMD2-216ENST00000488085 GNPATO15228 680 aa11.75□□□□□ -0.53
PSMD2-216ENST00000488085 MSH5O43196 834 aa11.75□□□□□ -0.53
PSMD2-216ENST00000488085 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
PSMD2-216ENST00000488085 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
PSMD2-216ENST00000488085 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
PSMD2-216ENST00000488085 ADRA2BP18089 450 aa11.74□□□□□ -0.53
PSMD2-216ENST00000488085 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
PSMD2-216ENST00000488085 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
PSMD2-216ENST00000488085 RTCBQ9Y3I0 505 aaKnown RBP11.74□□□□□ -0.53
PSMD2-216ENST00000488085 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
PSMD2-216ENST00000488085 LAMB4A4D0S4 1761 aa11.73□□□□□ -0.53
PSMD2-216ENST00000488085 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
PSMD2-216ENST00000488085 PHF14O94880 888 aa11.73□□□□□ -0.53
PSMD2-216ENST00000488085 CRKLP46109 303 aaKnown RBP11.73□□□□□ -0.53
PSMD2-216ENST00000488085 MYBBP1AQ9BQG0 1328 aaKnown RBP11.73□□□□□ -0.53
PSMD2-216ENST00000488085 TEFQ10587 303 aa11.72□□□□□ -0.53
PSMD2-216ENST00000488085 TRAPPC3LQ5T215 181 aa11.72□□□□□ -0.53
PSMD2-216ENST00000488085 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
PSMD2-216ENST00000488085 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
PSMD2-216ENST00000488085 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
PSMD2-216ENST00000488085 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
PSMD2-216ENST00000488085 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
PSMD2-216ENST00000488085 N4BP2Q86UW6 1770 aaPredicted RBP11.72□□□□□ -0.53
PSMD2-216ENST00000488085 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
PSMD2-216ENST00000488085 PRKRIP1Q9H875 184 aaPredicted RBP11.71□□□□□ -0.53
PSMD2-216ENST00000488085 BCORQ6W2J9 1755 aa11.71□□□□□ -0.54
PSMD2-216ENST00000488085 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.54
PSMD2-216ENST00000488085 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
PSMD2-216ENST00000488085 MCM10Q7L590 875 aa11.7□□□□□ -0.54
PSMD2-216ENST00000488085 ZNF496Q96IT1 587 aaPredicted RBP11.7□□□□□ -0.54
PSMD2-216ENST00000488085 PNNQ9H307 717 aaKnown RBP11.7□□□□□ -0.54
PSMD2-216ENST00000488085 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
PSMD2-216ENST00000488085 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
PSMD2-216ENST00000488085 SCN7AQ01118 1682 aa11.7□□□□□ -0.54
PSMD2-216ENST00000488085 SOS1Q07889 1333 aaPredicted RBP11.69□□□□□ -0.54
PSMD2-216ENST00000488085 GYS1P13807 737 aa11.69□□□□□ -0.54
PSMD2-216ENST00000488085 NFE2L2Q16236 605 aa11.69□□□□□ -0.54
PSMD2-216ENST00000488085 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
PSMD2-216ENST00000488085 RTF1Q92541 710 aaKnown RBP11.69□□□□□ -0.54
PSMD2-216ENST00000488085 USP42Q9H9J4 1324 aaKnown RBP11.68□□□□□ -0.54
PSMD2-216ENST00000488085 ARFGEF1Q9Y6D6 1849 aa11.68□□□□□ -0.54
PSMD2-216ENST00000488085 BTBD11A6QL63 1104 aa11.68□□□□□ -0.54
PSMD2-216ENST00000488085 KCNQ3O43525 872 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms