RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 WASF2Q9Y6W5 498 aa8.28□□□□□ -1.08
R3HDM1-218ENST00000487294 FAM135AQ9P2D6 1515 aa8.28□□□□□ -1.08
R3HDM1-218ENST00000487294 MBD5Q9P267 1494 aa8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 SUPT6HQ7KZ85 1726 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 HNRNPMP52272 730 aaKnown RBP eCLIP8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 CFDP1Q9UEE9 299 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 CLTCQ00610 1675 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 ADGBQ8N7X0 1667 aa8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 ZNF335Q9H4Z2 1342 aaPredicted RBP8.27□□□□□ -1.09
R3HDM1-218ENST00000487294 A2ML1A8K2U0 1454 aa8.26□□□□□ -1.09
R3HDM1-218ENST00000487294 AP1G2O75843 785 aa8.26□□□□□ -1.09
R3HDM1-218ENST00000487294 NPAS3Q8IXF0 933 aa8.26□□□□□ -1.09
R3HDM1-218ENST00000487294 ZNF511Q8NB15 262 aa8.26□□□□□ -1.09
R3HDM1-218ENST00000487294 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
R3HDM1-218ENST00000487294 ZNF777Q9ULD5 760 aaPredicted RBP8.25□□□□□ -1.09
R3HDM1-218ENST00000487294 DNMT1P26358 1616 aaKnown RBP8.25□□□□□ -1.09
R3HDM1-218ENST00000487294 DHX29Q7Z478 1369 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 UBAP1LF5GYI3 381 aa8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 CAPN5O15484 640 aaPredicted RBP8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 TRIM46Q7Z4K8 759 aa8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 CPS1P31327 1500 aa8.24□□□□□ -1.09
R3HDM1-218ENST00000487294 TIAM1Q13009 1591 aa8.23□□□□□ -1.09
R3HDM1-218ENST00000487294 CEP162Q5TB80 1403 aa8.23□□□□□ -1.09
R3HDM1-218ENST00000487294 BMP1P13497 986 aa8.23□□□□□ -1.09
R3HDM1-218ENST00000487294 GGT6Q6P531 493 aa8.23□□□□□ -1.09
R3HDM1-218ENST00000487294 PZPP20742 1482 aa8.23□□□□□ -1.09
R3HDM1-218ENST00000487294 MTUS2Q5JR59 1369 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 NEURL4Q96JN8 1562 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 MED14O60244 1454 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 MPNDQ8N594 471 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 HMX1Q9NP08 348 aaPredicted RBP8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 EHBP1L1Q8N3D4 1523 aa8.22□□□□□ -1.09
R3HDM1-218ENST00000487294 SHANK2Q9UPX8 1470 aa8.21□□□□□ -1.09
R3HDM1-218ENST00000487294 KDM5DQ9BY66 1539 aa8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 NR6A1Q15406 480 aa8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 FOXJ1Q92949 421 aa8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 ZNF644Q9H582 1327 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 DEPDC5O75140 1603 aa8.21□□□□□ -1.1
R3HDM1-218ENST00000487294 POLR1AO95602 1720 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 NLRP1Q9C000 1473 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 VARSP26640 1264 aaKnown RBP8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 C4orf48Q5BLP8 95 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 IRF7Q92985 503 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 TNRQ92752 1358 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 MIA2Q96PC5 1412 aa8.2□□□□□ -1.1
R3HDM1-218ENST00000487294 CCDC141Q6ZP82 1450 aa8.19□□□□□ -1.1
R3HDM1-218ENST00000487294 VWDEQ8N2E2 1590 aa8.19□□□□□ -1.1
R3HDM1-218ENST00000487294 TOM1O60784 492 aa8.19□□□□□ -1.1
R3HDM1-218ENST00000487294 THEMISQ8N1K5 641 aaPredicted RBP8.19□□□□□ -1.1
R3HDM1-218ENST00000487294 ARHGEF5Q12774 1597 aa8.18□□□□□ -1.1
R3HDM1-218ENST00000487294 ALKQ9UM73 1620 aa8.18□□□□□ -1.1
R3HDM1-218ENST00000487294 H3BM21 787 aa8.18□□□□□ -1.1
R3HDM1-218ENST00000487294 ANKLE2Q86XL3 938 aa8.18□□□□□ -1.1
R3HDM1-218ENST00000487294 KIF3BO15066 747 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 HSPA1LP34931 641 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 GMPRP36959 345 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 NNTQ13423 1086 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 SH3BP5LQ7L8J4 393 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 FKBPLQ9UIM3 349 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 MED1Q15648 1581 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 UGGT1Q9NYU2 1555 aa8.17□□□□□ -1.1
R3HDM1-218ENST00000487294 NPHP4O75161 1426 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 CAMSAP2Q08AD1 1489 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 AGERQ15109 404 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 NBPF14Q5TI25 921 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 GPKOWQ92917 476 aaPredicted RBP eCLIP8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 ZFP42Q96MM3 310 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 RNF17Q9BXT8 1623 aaKnown RBP8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 WASHC2CQ9Y4E1 1318 aa8.16□□□□□ -1.1
R3HDM1-218ENST00000487294 ZC3H13Q5T200 1668 aaKnown RBP8.15□□□□□ -1.1
R3HDM1-218ENST00000487294 MAST1Q9Y2H9 1570 aa8.15□□□□□ -1.1
R3HDM1-218ENST00000487294 ADH1CP00326 375 aa8.15□□□□□ -1.1
R3HDM1-218ENST00000487294 FAM174AQ8TBP5 190 aa8.15□□□□□ -1.1
R3HDM1-218ENST00000487294 GJD4Q96KN9 370 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-218ENST00000487294 SCARF1Q14162 830 aa8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 MRPL14Q6P1L8 145 aaKnown RBP8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 PDXDC2PQ6P474 469 aa8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 BANK1Q8NDB2 785 aa8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 EIF2AK4Q9P2K8 1649 aaKnown RBP8.14□□□□□ -1.11
R3HDM1-218ENST00000487294 ABCC3O15438 1527 aa8.13□□□□□ -1.11
R3HDM1-218ENST00000487294 TSPY4P0CV99 314 aa8.13□□□□□ -1.11
R3HDM1-218ENST00000487294 TSPY10P0CW01 314 aa8.13□□□□□ -1.11
R3HDM1-218ENST00000487294 TIMP2P16035 220 aa8.13□□□□□ -1.11
R3HDM1-218ENST00000487294 CDK15Q96Q40 435 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms