RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
HSPG2-211ENST00000486901 LRRCC1Q9C099 1032 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 POGZQ7Z3K3 1410 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 ATP10DQ9P241 1426 aa14.99□□□□□ -0.01
HSPG2-211ENST00000486901 PPFIA3O75145 1194 aa14.98□□□□□ -0.01
HSPG2-211ENST00000486901 CHMLP26374 656 aa14.98□□□□□ -0.01
HSPG2-211ENST00000486901 TAOK2Q9UL54 1235 aa14.98□□□□□ -0.01
HSPG2-211ENST00000486901 MCCP23508 829 aa14.98□□□□□ -0.01
HSPG2-211ENST00000486901 BRPF1P55201 1214 aaPredicted RBP14.98□□□□□ -0.01
HSPG2-211ENST00000486901 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
HSPG2-211ENST00000486901 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
HSPG2-211ENST00000486901 ARAP3Q8WWN8 1544 aa14.97□□□□□ -0.01
HSPG2-211ENST00000486901 GNAI2P04899 355 aa14.97□□□□□ -0.01
HSPG2-211ENST00000486901 NECAB1Q8N987 351 aa14.97□□□□□ -0.01
HSPG2-211ENST00000486901 MBD3O95983 291 aa14.96□□□□□ -0.01
HSPG2-211ENST00000486901 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
HSPG2-211ENST00000486901 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.01
HSPG2-211ENST00000486901 MTHFSDQ2M296 383 aaKnown RBP14.96□□□□□ -0.01
HSPG2-211ENST00000486901 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
HSPG2-211ENST00000486901 RASEFQ8IZ41 740 aa14.96□□□□□ -0.01
HSPG2-211ENST00000486901 LARGE1O95461 756 aa14.96□□□□□ -0.01
HSPG2-211ENST00000486901 FOSBP53539 338 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-211ENST00000486901 NOLC1Q14978 699 aaKnown RBP eCLIP14.95□□□□□ -0.028e-6■■□□□ 11.9
HSPG2-211ENST00000486901 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 STK31Q9BXU1 1019 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 ABCC3O15438 1527 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 PIK3R4Q99570 1358 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-211ENST00000486901 CHL1O00533 1208 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 DNM1Q05193 864 aaKnown RBP14.95□□□□□ -0.02
HSPG2-211ENST00000486901 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 KIDINS220Q9ULH0 1771 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 IBTKQ9P2D0 1353 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-211ENST00000486901 PHAXQ9H814 394 aaKnown RBP14.95□□□□□ -0.02
HSPG2-211ENST00000486901 SETBP1Q9Y6X0 1596 aa14.95□□□□□ -0.02
HSPG2-211ENST00000486901 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
HSPG2-211ENST00000486901 CSPP1Q1MSJ5 1256 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 CKAP2LQ8IYA6 745 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 PUS7Q96PZ0 661 aaKnown RBP14.94□□□□□ -0.02
HSPG2-211ENST00000486901 AP5Z1O43299 807 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
HSPG2-211ENST00000486901 AK2P54819 239 aa14.93□□□□□ -0.02
HSPG2-211ENST00000486901 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
HSPG2-211ENST00000486901 CCDC9Q9Y3X0 531 aaKnown RBP14.93□□□□□ -0.02
HSPG2-211ENST00000486901 FLIIQ13045 1269 aa14.93□□□□□ -0.02
HSPG2-211ENST00000486901 SYAP1Q96A49 352 aaPredicted RBP14.93□□□□□ -0.02
HSPG2-211ENST00000486901 PRDM4Q9UKN5 801 aa14.93□□□□□ -0.02
HSPG2-211ENST00000486901 PYCARDQ9ULZ3 195 aa14.93□□□□□ -0.02
HSPG2-211ENST00000486901 ZC3H13Q5T200 1668 aaKnown RBP14.93□□□□□ -0.02
HSPG2-211ENST00000486901 PTPRMP28827 1452 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 ARHGEF28Q8N1W1 1705 aaKnown RBP14.92□□□□□ -0.02
HSPG2-211ENST00000486901 PPLO60437 1756 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 CASTP20810 708 aaKnown RBP14.92□□□□□ -0.02
HSPG2-211ENST00000486901 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 SYT1P21579 422 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 STK3Q13188 491 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
HSPG2-211ENST00000486901 TFIP11Q9UBB9 837 aaKnown RBP14.92□□□□□ -0.02
HSPG2-211ENST00000486901 DYNC1I1O14576 645 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 NAA30Q147X3 362 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-211ENST00000486901 DRC7Q8IY82 874 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 ATP2B3Q16720 1220 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 HS1BP3Q53T59 392 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 CCDC61Q9Y6R9 512 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 RGS12O14924 1447 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 YEATS2Q9ULM3 1422 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 A0A087WWV3 80 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 ARHGEF40Q8TER5 1519 aa14.91□□□□□ -0.02
HSPG2-211ENST00000486901 KCNJ4P48050 445 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 CEBPAP49715 358 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-211ENST00000486901 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 ABCA9Q8IUA7 1624 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 SRGAP3O43295 1099 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 AMPHP49418 695 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 CEBPZQ03701 1054 aaKnown RBP14.9□□□□□ -0.02
HSPG2-211ENST00000486901 PRPF40BQ6NWY9 871 aaKnown RBP14.9□□□□□ -0.02
HSPG2-211ENST00000486901 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 ZNF592Q92610 1267 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
HSPG2-211ENST00000486901 MAP2P11137 1827 aaKnown RBP14.89□□□□□ -0.03
HSPG2-211ENST00000486901 WDR33Q9C0J8 1336 aaKnown RBP14.89□□□□□ -0.03
HSPG2-211ENST00000486901 UBTFL1P0CB47 393 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-211ENST00000486901 LRMPQ12912 555 aa14.89□□□□□ -0.03
HSPG2-211ENST00000486901 TCHHQ07283 1943 aa14.89□□□□□ -0.03
HSPG2-211ENST00000486901 STX6O43752 255 aa14.89□□□□□ -0.03
HSPG2-211ENST00000486901 U2AF2P26368 475 aaKnown RBP eCLIP14.89□□□□□ -0.03
HSPG2-211ENST00000486901 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
HSPG2-211ENST00000486901 LUZP1Q86V48 1076 aa14.89□□□□□ -0.03
HSPG2-211ENST00000486901 JAKMIP1Q96N16 626 aaKnown RBP14.89□□□□□ -0.03
HSPG2-211ENST00000486901 PRR36Q9H6K5 1346 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 SNX14Q9Y5W7 946 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 NPHP1O15259 732 aa14.88□□□□□ -0.03
HSPG2-211ENST00000486901 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-211ENST00000486901 GJB2P29033 226 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms