RNA–Protein interactions for RNA: ENST00000486440.5

PCOLCE-207, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 3

Gene PCOLCE, Length 765 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-207ENST00000486440 APAF1O14727 1248 aa24.61■■□□□ 1.53
PCOLCE-207ENST00000486440 HTATSF1O43719 755 aaKnown RBP24.61■■□□□ 1.53
PCOLCE-207ENST00000486440 MCM10Q7L590 875 aa24.61■■□□□ 1.53
PCOLCE-207ENST00000486440 TMOD3Q9NYL9 352 aa24.61■■□□□ 1.53
PCOLCE-207ENST00000486440 NUP188Q5SRE5 1749 aa24.61■■□□□ 1.53
PCOLCE-207ENST00000486440 BAG6P46379 1132 aa24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 RIPK4P57078 832 aa24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 CABP4P57796 275 aa24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 EZH2Q15910 746 aaKnown RBP24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 SLC52A2Q9HAB3 445 aa24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 TAF1LQ8IZX4 1826 aa24.6■■□□□ 1.53
PCOLCE-207ENST00000486440 ASAP1Q9ULH1 1129 aa24.59■■□□□ 1.53
PCOLCE-207ENST00000486440 TRIM35Q9UPQ4 493 aa24.59■■□□□ 1.53
PCOLCE-207ENST00000486440 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
PCOLCE-207ENST00000486440 ATG3Q9NT62 314 aa24.58■■□□□ 1.53
PCOLCE-207ENST00000486440 NEUROD2Q15784 382 aa24.57■■□□□ 1.52
PCOLCE-207ENST00000486440 THUMPD2Q9BTF0 503 aaKnown RBP24.57■■□□□ 1.52
PCOLCE-207ENST00000486440 SENP3-EIF4A1A0A087X0R7 540 aa24.56■■□□□ 1.52
PCOLCE-207ENST00000486440 RTF1Q92541 710 aaKnown RBP24.56■■□□□ 1.52
PCOLCE-207ENST00000486440 ZNF831Q5JPB2 1677 aa24.54■■□□□ 1.52
PCOLCE-207ENST00000486440 KDM3BQ7LBC6 1761 aa24.54■■□□□ 1.52
PCOLCE-207ENST00000486440 TXNRD1Q16881 649 aa24.53■■□□□ 1.52
PCOLCE-207ENST00000486440 TEFQ10587 303 aa24.52■■□□□ 1.52
PCOLCE-207ENST00000486440 LRRC4BQ9NT99 713 aa24.52■■□□□ 1.52
PCOLCE-207ENST00000486440 PALLDQ8WX93 1383 aa24.52■■□□□ 1.52
PCOLCE-207ENST00000486440 KCNQ4P56696 695 aa24.51■■□□□ 1.51
PCOLCE-207ENST00000486440 SLC39A6Q13433 755 aa24.51■■□□□ 1.51
PCOLCE-207ENST00000486440 C5P01031 1676 aa24.5■■□□□ 1.51
PCOLCE-207ENST00000486440 SMARCC1Q92922 1105 aaPredicted RBP24.5■■□□□ 1.51
PCOLCE-207ENST00000486440 SLC4A9Q96Q91 983 aa24.5■■□□□ 1.51
PCOLCE-207ENST00000486440 KCPQ6ZWJ8 1503 aa24.5■■□□□ 1.51
PCOLCE-207ENST00000486440 TJP1Q07157 1748 aa24.49■■□□□ 1.51
PCOLCE-207ENST00000486440 COL5A3P25940 1745 aaPredicted RBP24.49■■□□□ 1.51
PCOLCE-207ENST00000486440 KCNQ3O43525 872 aa24.48■■□□□ 1.51
PCOLCE-207ENST00000486440 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
PCOLCE-207ENST00000486440 TAF7Q15545 349 aaPredicted RBP24.48■■□□□ 1.51
PCOLCE-207ENST00000486440 CICQ96RK0 1608 aaPredicted RBP24.48■■□□□ 1.51
PCOLCE-207ENST00000486440 MYH14Q7Z406 1995 aaKnown RBP24.47■■□□□ 1.51
PCOLCE-207ENST00000486440 MIS18AQ9NYP9 233 aa24.47■■□□□ 1.51
PCOLCE-207ENST00000486440 TUBGCP6Q96RT7 1819 aa24.47■■□□□ 1.51
PCOLCE-207ENST00000486440 LOC102724428A0A0B4J2F2 783 aa24.46■■□□□ 1.51
PCOLCE-207ENST00000486440 BTBD11A6QL63 1104 aa24.46■■□□□ 1.51
PCOLCE-207ENST00000486440 SIK1P57059 783 aa24.46■■□□□ 1.51
PCOLCE-207ENST00000486440 NCBP3Q53F19 620 aaKnown RBP24.46■■□□□ 1.51
PCOLCE-207ENST00000486440 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
PCOLCE-207ENST00000486440 SLC27A3Q5K4L6 730 aa24.45■■□□□ 1.5
PCOLCE-207ENST00000486440 ZNF790Q6PG37 636 aa24.45■■□□□ 1.5
PCOLCE-207ENST00000486440 PTCD1O75127 700 aaKnown RBP24.44■■□□□ 1.5
PCOLCE-207ENST00000486440 ITPK1Q13572 414 aa24.44■■□□□ 1.5
PCOLCE-207ENST00000486440 CCNL1Q9UK58 526 aaPredicted RBP24.44■■□□□ 1.5
PCOLCE-207ENST00000486440 WWC1Q8IX03 1113 aa24.43■■□□□ 1.5
PCOLCE-207ENST00000486440 C4BP0C0L5 1744 aa24.42■■□□□ 1.5
PCOLCE-207ENST00000486440 RBM42Q9BTD8 480 aaKnown RBP24.42■■□□□ 1.5
PCOLCE-207ENST00000486440 SALL2Q9Y467 1007 aaPredicted RBP24.42■■□□□ 1.5
PCOLCE-207ENST00000486440 ZNF496Q96IT1 587 aaPredicted RBP24.41■■□□□ 1.5
PCOLCE-207ENST00000486440 UBR3Q6ZT12 1888 aa24.41■■□□□ 1.5
PCOLCE-207ENST00000486440 CHL1O00533 1208 aa24.4■■□□□ 1.5
PCOLCE-207ENST00000486440 ATP6V1AP38606 617 aa24.4■■□□□ 1.5
PCOLCE-207ENST00000486440 ANO8Q9HCE9 1232 aaPredicted RBP24.4■■□□□ 1.5
PCOLCE-207ENST00000486440 QSER1Q2KHR3 1735 aa24.39■■□□□ 1.5
PCOLCE-207ENST00000486440 ZNF853P0CG23 659 aa24.39■■□□□ 1.49
PCOLCE-207ENST00000486440 LINC00116Q8NCU8 138 aa24.39■■□□□ 1.49
PCOLCE-207ENST00000486440 TTC5Q8N0Z6 440 aa24.37■■□□□ 1.49
PCOLCE-207ENST00000486440 AKT1S1Q96B36 256 aa24.37■■□□□ 1.49
PCOLCE-207ENST00000486440 BABAM1Q9NWV8 329 aa24.37■■□□□ 1.49
PCOLCE-207ENST00000486440 ZNF827Q17R98 1081 aa24.36■■□□□ 1.49
PCOLCE-207ENST00000486440 HEG1Q9ULI3 1381 aa24.36■■□□□ 1.49
PCOLCE-207ENST00000486440 ZNF521Q96K83 1311 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 EIF4A1P60842 406 aaKnown RBP24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 DNAJC10Q8IXB1 793 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 VSIG10Q8N0Z9 540 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 NGEFQ8N5V2 710 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 CFAP44Q96MT7 982 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 FMNL2Q96PY5 1086 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 TSPYL4Q9UJ04 414 aa24.35■■□□□ 1.49
PCOLCE-207ENST00000486440 LAMB4A4D0S4 1761 aa24.34■■□□□ 1.49
PCOLCE-207ENST00000486440 PRAMEF22A3QJZ6 481 aa24.34■■□□□ 1.49
PCOLCE-207ENST00000486440 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
PCOLCE-207ENST00000486440 SLC15A2Q16348 729 aa24.32■■□□□ 1.48
PCOLCE-207ENST00000486440 AMIGO3Q86WK7 504 aa24.32■■□□□ 1.48
PCOLCE-207ENST00000486440 WDR63Q8IWG1 891 aa24.32■■□□□ 1.48
PCOLCE-207ENST00000486440 MBIPQ9NS73 344 aa24.32■■□□□ 1.48
PCOLCE-207ENST00000486440 IFT57Q9NWB7 429 aa24.32■■□□□ 1.48
PCOLCE-207ENST00000486440 CYP19A1P11511 503 aaPredicted RBP24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 CALD1Q05682 793 aaKnown RBP24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 NBPF14Q5TI25 921 aa24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 SPINK5Q9NQ38 1064 aaPredicted RBP24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 CASZ1Q86V15 1759 aa24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 IL16Q14005 1332 aa24.31■■□□□ 1.48
PCOLCE-207ENST00000486440 GNAI1P63096 354 aa24.3■■□□□ 1.48
PCOLCE-207ENST00000486440 GIGYF1O75420 1035 aaPredicted RBP24.29■■□□□ 1.48
PCOLCE-207ENST00000486440 KRT24Q2M2I5 525 aa24.29■■□□□ 1.48
PCOLCE-207ENST00000486440 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
PCOLCE-207ENST00000486440 STK32BQ9NY57 414 aa24.29■■□□□ 1.48
PCOLCE-207ENST00000486440 USP16Q9Y5T5 823 aa24.29■■□□□ 1.48
PCOLCE-207ENST00000486440 R3HDM1Q15032 1099 aaKnown RBP24.28■■□□□ 1.48
PCOLCE-207ENST00000486440 RC3H1Q5TC82 1133 aaKnown RBP24.28■■□□□ 1.48
PCOLCE-207ENST00000486440 SMIM5Q71RC9 77 aa24.28■■□□□ 1.48
PCOLCE-207ENST00000486440 CNTNAP4Q9C0A0 1308 aa24.28■■□□□ 1.48
PCOLCE-207ENST00000486440 PSDA5PKW4 1024 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms