RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 RGPD3A6NKT7 1758 aaPredicted RBP14.98□□□□□ -0.01
NUP50-216ENST00000486184 RGPD4Q7Z3J3 1758 aa14.98□□□□□ -0.01
NUP50-216ENST00000486184 APAF1O14727 1248 aa14.97□□□□□ -0.01
NUP50-216ENST00000486184 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
NUP50-216ENST00000486184 TEFQ10587 303 aa14.97□□□□□ -0.01
NUP50-216ENST00000486184 U3KPZ7 1027 aaPredicted RBP14.97□□□□□ -0.01
NUP50-216ENST00000486184 MRC1P22897 1456 aa14.96□□□□□ -0.01
NUP50-216ENST00000486184 KCNQ2O43526 872 aa14.96□□□□□ -0.01
NUP50-216ENST00000486184 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
NUP50-216ENST00000486184 APBA3O96018 575 aa14.95□□□□□ -0.02
NUP50-216ENST00000486184 BAG6P46379 1132 aa14.95□□□□□ -0.02
NUP50-216ENST00000486184 MCM10Q7L590 875 aa14.95□□□□□ -0.02
NUP50-216ENST00000486184 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
NUP50-216ENST00000486184 LY75O60449 1722 aa14.95□□□□□ -0.02
NUP50-216ENST00000486184 SLC52A2Q9HAB3 445 aa14.94□□□□□ -0.02
NUP50-216ENST00000486184 PAPPAQ13219 1627 aa14.93□□□□□ -0.02
NUP50-216ENST00000486184 DCTN1Q14203 1278 aa14.93□□□□□ -0.02
NUP50-216ENST00000486184 NFATC2IPQ8NCF5 419 aa14.93□□□□□ -0.02
NUP50-216ENST00000486184 IL17REQ8NFR9 667 aa14.93□□□□□ -0.02
NUP50-216ENST00000486184 CEMIPQ8WUJ3 1361 aa14.93□□□□□ -0.02
NUP50-216ENST00000486184 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
NUP50-216ENST00000486184 PIGBQ92521 554 aa14.92□□□□□ -0.02
NUP50-216ENST00000486184 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
NUP50-216ENST00000486184 KDM3BQ7LBC6 1761 aa14.91□□□□□ -0.02
NUP50-216ENST00000486184 CALD1Q05682 793 aaKnown RBP14.91□□□□□ -0.02
NUP50-216ENST00000486184 PTF1AQ7RTS3 328 aa14.91□□□□□ -0.02
NUP50-216ENST00000486184 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
NUP50-216ENST00000486184 NGEFQ8N5V2 710 aa14.91□□□□□ -0.02
NUP50-216ENST00000486184 EP400Q96L91 3159 aa14.91□□□□□ -0.02
NUP50-216ENST00000486184 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
NUP50-216ENST00000486184 RREB1Q92766 1687 aa14.9□□□□□ -0.02
NUP50-216ENST00000486184 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
NUP50-216ENST00000486184 SALL2Q9Y467 1007 aaPredicted RBP14.9□□□□□ -0.02
NUP50-216ENST00000486184 PALLDQ8WX93 1383 aa14.89□□□□□ -0.03
NUP50-216ENST00000486184 BTBD11A6QL63 1104 aa14.89□□□□□ -0.03
NUP50-216ENST00000486184 SOCS7O14512 581 aa14.89□□□□□ -0.03
NUP50-216ENST00000486184 TRIM35Q9UPQ4 493 aa14.89□□□□□ -0.03
NUP50-216ENST00000486184 C5P01031 1676 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 TAF1LQ8IZX4 1826 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 PLSCR1O15162 318 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 EN1Q05925 392 aaPredicted RBP14.88□□□□□ -0.03
NUP50-216ENST00000486184 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
NUP50-216ENST00000486184 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
NUP50-216ENST00000486184 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 DEFB132Q7Z7B7 95 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
NUP50-216ENST00000486184 NUP188Q5SRE5 1749 aa14.88□□□□□ -0.03
NUP50-216ENST00000486184 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
NUP50-216ENST00000486184 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
NUP50-216ENST00000486184 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
NUP50-216ENST00000486184 ASAP1Q9ULH1 1129 aa14.87□□□□□ -0.03
NUP50-216ENST00000486184 HMGB2P26583 209 aaKnown RBP14.86□□□□□ -0.03
NUP50-216ENST00000486184 SLC39A6Q13433 755 aa14.86□□□□□ -0.03
NUP50-216ENST00000486184 EZH2Q15910 746 aaKnown RBP14.85□□□□□ -0.03
NUP50-216ENST00000486184 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
NUP50-216ENST00000486184 WWC1Q8IX03 1113 aa14.85□□□□□ -0.03
NUP50-216ENST00000486184 TSPYL4Q9UJ04 414 aa14.85□□□□□ -0.03
NUP50-216ENST00000486184 CCNL1Q9UK58 526 aaPredicted RBP14.85□□□□□ -0.03
NUP50-216ENST00000486184 TJP1Q07157 1748 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 LAMB4A4D0S4 1761 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 KCPQ6ZWJ8 1503 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
NUP50-216ENST00000486184 GNAI1P63096 354 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 HNRNPUQ00839 825 aaKnown RBP eCLIP14.84□□□□□ -0.03
NUP50-216ENST00000486184 TXNRD1Q16881 649 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 CAMKK2Q96RR4 588 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 BABAM1Q9NWV8 329 aa14.84□□□□□ -0.03
NUP50-216ENST00000486184 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
NUP50-216ENST00000486184 COL5A3P25940 1745 aaPredicted RBP14.83□□□□□ -0.03
NUP50-216ENST00000486184 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 SIK1P57059 783 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
NUP50-216ENST00000486184 FMNL2Q96PY5 1086 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 IFT57Q9NWB7 429 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 MIS18AQ9NYP9 233 aa14.83□□□□□ -0.04
NUP50-216ENST00000486184 WDR63Q8IWG1 891 aa14.82□□□□□ -0.04
NUP50-216ENST00000486184 CFAP44Q96MT7 982 aa14.82□□□□□ -0.04
NUP50-216ENST00000486184 C4BP0C0L5 1744 aa14.81□□□□□ -0.04
NUP50-216ENST00000486184 IL16Q14005 1332 aa14.81□□□□□ -0.04
NUP50-216ENST00000486184 NBPF14Q5TI25 921 aa14.8□□□□□ -0.04
NUP50-216ENST00000486184 ZNF496Q96IT1 587 aaPredicted RBP14.8□□□□□ -0.04
NUP50-216ENST00000486184 HEG1Q9ULI3 1381 aa14.8□□□□□ -0.04
NUP50-216ENST00000486184 CHL1O00533 1208 aa14.79□□□□□ -0.04
NUP50-216ENST00000486184 KCNQ3O43525 872 aa14.79□□□□□ -0.04
NUP50-216ENST00000486184 KCNQ4P56696 695 aa14.79□□□□□ -0.04
NUP50-216ENST00000486184 VSIG10Q8N0Z9 540 aa14.79□□□□□ -0.04
NUP50-216ENST00000486184 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
NUP50-216ENST00000486184 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
NUP50-216ENST00000486184 PROM2Q8N271 834 aa14.78□□□□□ -0.04
NUP50-216ENST00000486184 TEX13AQ9BXU3 409 aaPredicted RBP14.78□□□□□ -0.04
NUP50-216ENST00000486184 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
NUP50-216ENST00000486184 TUBGCP6Q96RT7 1819 aa14.78□□□□□ -0.04
NUP50-216ENST00000486184 QSER1Q2KHR3 1735 aa14.78□□□□□ -0.04
NUP50-216ENST00000486184 SNRPA1P09661 255 aaKnown RBP14.77□□□□□ -0.05
NUP50-216ENST00000486184 ZNF853P0CG23 659 aa14.77□□□□□ -0.05
NUP50-216ENST00000486184 EIF4A1P60842 406 aaKnown RBP14.77□□□□□ -0.05
NUP50-216ENST00000486184 LRRC4BQ9NT99 713 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms