RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 ITGB4P16144 1822 aa16.68■□□□□ 0.26
HDAC7-223ENST00000485796 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
HDAC7-223ENST00000485796 MRC1P22897 1456 aa16.67■□□□□ 0.26
HDAC7-223ENST00000485796 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
HDAC7-223ENST00000485796 TEFQ10587 303 aa16.66■□□□□ 0.26
HDAC7-223ENST00000485796 KCNQ4P56696 695 aa16.65■□□□□ 0.26
HDAC7-223ENST00000485796 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
HDAC7-223ENST00000485796 LMOD3Q0VAK6 560 aa16.65■□□□□ 0.26
HDAC7-223ENST00000485796 PROM2Q8N271 834 aa16.65■□□□□ 0.26
HDAC7-223ENST00000485796 BTAF1O14981 1849 aa16.65■□□□□ 0.26
HDAC7-223ENST00000485796 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
HDAC7-223ENST00000485796 TAF7Q15545 349 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-223ENST00000485796 CCDC27Q2M243 656 aa16.64■□□□□ 0.25
HDAC7-223ENST00000485796 SLC4A9Q96Q91 983 aa16.64■□□□□ 0.25
HDAC7-223ENST00000485796 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-223ENST00000485796 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
HDAC7-223ENST00000485796 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
HDAC7-223ENST00000485796 CAMKK2Q96RR4 588 aa16.63■□□□□ 0.25
HDAC7-223ENST00000485796 LAS1LQ9Y4W2 734 aaKnown RBP16.63■□□□□ 0.25
HDAC7-223ENST00000485796 ZNF521Q96K83 1311 aa16.63■□□□□ 0.25
HDAC7-223ENST00000485796 SIPA1L3O60292 1781 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-223ENST00000485796 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
HDAC7-223ENST00000485796 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
HDAC7-223ENST00000485796 PALLDQ8WX93 1383 aa16.62■□□□□ 0.25
HDAC7-223ENST00000485796 PTCD1O75127 700 aaKnown RBP16.61■□□□□ 0.25
HDAC7-223ENST00000485796 ZNF853P0CG23 659 aa16.61■□□□□ 0.25
HDAC7-223ENST00000485796 LRRC4BQ9NT99 713 aa16.61■□□□□ 0.25
HDAC7-223ENST00000485796 CHL1O00533 1208 aa16.6■□□□□ 0.25
HDAC7-223ENST00000485796 PLSCR1O15162 318 aa16.6■□□□□ 0.25
HDAC7-223ENST00000485796 SF3B2Q13435 895 aaKnown RBP16.6■□□□□ 0.25
HDAC7-223ENST00000485796 ZNF790Q6PG37 636 aa16.6■□□□□ 0.25
HDAC7-223ENST00000485796 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
HDAC7-223ENST00000485796 PRAMEF22A3QJZ6 481 aa16.59■□□□□ 0.25
HDAC7-223ENST00000485796 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
HDAC7-223ENST00000485796 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
HDAC7-223ENST00000485796 CDCA7LQ96GN5 454 aa16.59■□□□□ 0.25
HDAC7-223ENST00000485796 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
HDAC7-223ENST00000485796 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
HDAC7-223ENST00000485796 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
HDAC7-223ENST00000485796 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
HDAC7-223ENST00000485796 SOCS7O14512 581 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 BAG6P46379 1132 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 ITPK1Q13572 414 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 WDR63Q8IWG1 891 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 SMARCC1Q92922 1105 aaPredicted RBP16.58■□□□□ 0.24
HDAC7-223ENST00000485796 TSR2Q969E8 191 aaKnown RBP16.58■□□□□ 0.24
HDAC7-223ENST00000485796 CFAP44Q96MT7 982 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 MBIPQ9NS73 344 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 KCPQ6ZWJ8 1503 aa16.58■□□□□ 0.24
HDAC7-223ENST00000485796 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
HDAC7-223ENST00000485796 SIK1P57059 783 aa16.57■□□□□ 0.24
HDAC7-223ENST00000485796 NGEFQ8N5V2 710 aa16.57■□□□□ 0.24
HDAC7-223ENST00000485796 IFT57Q9NWB7 429 aa16.57■□□□□ 0.24
HDAC7-223ENST00000485796 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
HDAC7-223ENST00000485796 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
HDAC7-223ENST00000485796 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
HDAC7-223ENST00000485796 CCNL1Q9UK58 526 aaPredicted RBP16.56■□□□□ 0.24
HDAC7-223ENST00000485796 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
HDAC7-223ENST00000485796 GNAI1P63096 354 aa16.55■□□□□ 0.24
HDAC7-223ENST00000485796 DNAJC10Q8IXB1 793 aa16.55■□□□□ 0.24
HDAC7-223ENST00000485796 KDM3BQ7LBC6 1761 aa16.54■□□□□ 0.24
HDAC7-223ENST00000485796 IL16Q14005 1332 aa16.54■□□□□ 0.24
HDAC7-223ENST00000485796 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
HDAC7-223ENST00000485796 LY75O60449 1722 aa16.53■□□□□ 0.24
HDAC7-223ENST00000485796 FANCIQ9NVI1 1328 aa16.53■□□□□ 0.24
HDAC7-223ENST00000485796 CALD1Q05682 793 aaKnown RBP16.53■□□□□ 0.24
HDAC7-223ENST00000485796 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
HDAC7-223ENST00000485796 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
HDAC7-223ENST00000485796 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
HDAC7-223ENST00000485796 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
HDAC7-223ENST00000485796 GOLGA2Q08379 1002 aa16.52■□□□□ 0.24
HDAC7-223ENST00000485796 SLFN5Q08AF3 891 aa16.52■□□□□ 0.24
HDAC7-223ENST00000485796 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
HDAC7-223ENST00000485796 ANO8Q9HCE9 1232 aaPredicted RBP16.52■□□□□ 0.24
HDAC7-223ENST00000485796 USP16Q9Y5T5 823 aa16.52■□□□□ 0.24
HDAC7-223ENST00000485796 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
HDAC7-223ENST00000485796 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-223ENST00000485796 GIGYF1O75420 1035 aaPredicted RBP16.51■□□□□ 0.23
HDAC7-223ENST00000485796 SLC27A3Q5K4L6 730 aa16.51■□□□□ 0.23
HDAC7-223ENST00000485796 AMIGO3Q86WK7 504 aa16.51■□□□□ 0.23
HDAC7-223ENST00000485796 TSPYL6Q8N831 410 aa16.51■□□□□ 0.23
HDAC7-223ENST00000485796 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
HDAC7-223ENST00000485796 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
HDAC7-223ENST00000485796 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
HDAC7-223ENST00000485796 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
HDAC7-223ENST00000485796 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-223ENST00000485796 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
HDAC7-223ENST00000485796 EXOSC9Q06265 439 aaKnown RBP16.49■□□□□ 0.23
HDAC7-223ENST00000485796 TJP1Q07157 1748 aa16.49■□□□□ 0.23
HDAC7-223ENST00000485796 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
HDAC7-223ENST00000485796 E9PSI1 815 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 A1BGP04217 495 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 NECTIN2Q92692 538 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 RREB1Q92766 1687 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 RGPD3A6NKT7 1758 aaPredicted RBP16.48■□□□□ 0.23
HDAC7-223ENST00000485796 RGPD4Q7Z3J3 1758 aa16.48■□□□□ 0.23
HDAC7-223ENST00000485796 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
HDAC7-223ENST00000485796 NUP188Q5SRE5 1749 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms