RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ZNF784Q8NCA9 323 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-208ENST00000485618 SMARCC1Q92922 1105 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-208ENST00000485618 ARXQ96QS3 562 aa10.89□□□□□ -0.67
SF3A1-208ENST00000485618 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
SF3A1-208ENST00000485618 TMOD3Q9NYL9 352 aa10.89□□□□□ -0.67
SF3A1-208ENST00000485618 TEFQ10587 303 aa10.88□□□□□ -0.67
SF3A1-208ENST00000485618 PNISRQ8TF01 805 aaKnown RBP10.88□□□□□ -0.67
SF3A1-208ENST00000485618 MAP3K5Q99683 1374 aa10.88□□□□□ -0.67
SF3A1-208ENST00000485618 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
SF3A1-208ENST00000485618 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
SF3A1-208ENST00000485618 NFE2L2Q16236 605 aa10.87□□□□□ -0.67
SF3A1-208ENST00000485618 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
SF3A1-208ENST00000485618 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
SF3A1-208ENST00000485618 PHACTR3Q96KR7 559 aa10.87□□□□□ -0.67
SF3A1-208ENST00000485618 NGEFQ8N5V2 710 aa10.86□□□□□ -0.67
SF3A1-208ENST00000485618 PLEKHF1Q96S99 279 aa10.86□□□□□ -0.67
SF3A1-208ENST00000485618 LRRC4BQ9NT99 713 aa10.86□□□□□ -0.67
SF3A1-208ENST00000485618 QSER1Q2KHR3 1735 aa10.86□□□□□ -0.67
SF3A1-208ENST00000485618 RIPK4P57078 832 aa10.85□□□□□ -0.67
SF3A1-208ENST00000485618 C1QTNF8P60827 252 aa10.85□□□□□ -0.67
SF3A1-208ENST00000485618 SLC27A3Q5K4L6 730 aa10.85□□□□□ -0.67
SF3A1-208ENST00000485618 FAM9BQ8IZU0 186 aa10.85□□□□□ -0.67
SF3A1-208ENST00000485618 CEP350Q5VT06 3117 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 PKD1L3Q7Z443 1732 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 TUBGCP6Q96RT7 1819 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 CHD4Q14839 1912 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
SF3A1-208ENST00000485618 POLD1P28340 1107 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 TMPOP42166 694 aaKnown RBP10.84□□□□□ -0.67
SF3A1-208ENST00000485618 GPR162Q16538 588 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
SF3A1-208ENST00000485618 NFATC2IPQ8NCF5 419 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 SLC52A2Q9HAB3 445 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 PNPLA7Q6ZV29 1317 aa10.84□□□□□ -0.67
SF3A1-208ENST00000485618 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
SF3A1-208ENST00000485618 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
SF3A1-208ENST00000485618 TTC5Q8N0Z6 440 aa10.83□□□□□ -0.68
SF3A1-208ENST00000485618 PIGBQ92521 554 aa10.83□□□□□ -0.68
SF3A1-208ENST00000485618 TFCP2L1Q9NZI6 479 aa10.83□□□□□ -0.68
SF3A1-208ENST00000485618 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
SF3A1-208ENST00000485618 LY75O60449 1722 aa10.82□□□□□ -0.68
SF3A1-208ENST00000485618 KCNQ4P56696 695 aa10.82□□□□□ -0.68
SF3A1-208ENST00000485618 TAF7Q15545 349 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-208ENST00000485618 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
SF3A1-208ENST00000485618 MIER1Q8N108 512 aa10.82□□□□□ -0.68
SF3A1-208ENST00000485618 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
SF3A1-208ENST00000485618 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 UTRNP46939 3433 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 APAF1O14727 1248 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 CCDC184Q52MB2 194 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 IL17REQ8NFR9 667 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 LGR6Q9HBX8 967 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 BABAM1Q9NWV8 329 aa10.81□□□□□ -0.68
SF3A1-208ENST00000485618 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
SF3A1-208ENST00000485618 MCM10Q7L590 875 aa10.8□□□□□ -0.68
SF3A1-208ENST00000485618 TEX13AQ9BXU3 409 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-208ENST00000485618 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
SF3A1-208ENST00000485618 CCNL1Q9UK58 526 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-208ENST00000485618 MSH5O43196 834 aa10.79□□□□□ -0.68
SF3A1-208ENST00000485618 NLGN2Q8NFZ4 835 aa10.79□□□□□ -0.68
SF3A1-208ENST00000485618 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
SF3A1-208ENST00000485618 ATG3Q9NT62 314 aa10.79□□□□□ -0.68
SF3A1-208ENST00000485618 CEMIPQ8WUJ3 1361 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 PALLDQ8WX93 1383 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 KDM6AO15550 1401 aaPredicted RBP10.78□□□□□ -0.68
SF3A1-208ENST00000485618 LOC102724428A0A0B4J2F2 783 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 GIGYF1O75420 1035 aaPredicted RBP10.78□□□□□ -0.68
SF3A1-208ENST00000485618 STARD3NLO95772 234 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 SIK1P57059 783 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 CCDC27Q2M243 656 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 VSIG10Q8N0Z9 540 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 FMNL2Q96PY5 1086 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 ASAP1Q9ULH1 1129 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 RRP7AQ9Y3A4 280 aaKnown RBP10.78□□□□□ -0.68
SF3A1-208ENST00000485618 C5P01031 1676 aa10.78□□□□□ -0.68
SF3A1-208ENST00000485618 ATP6V1AP38606 617 aa10.77□□□□□ -0.69
SF3A1-208ENST00000485618 MSL1Q68DK7 614 aa10.77□□□□□ -0.69
SF3A1-208ENST00000485618 ZNF790Q6PG37 636 aa10.77□□□□□ -0.69
SF3A1-208ENST00000485618 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
SF3A1-208ENST00000485618 PTCD1O75127 700 aaKnown RBP10.76□□□□□ -0.69
SF3A1-208ENST00000485618 GNAI1P63096 354 aa10.76□□□□□ -0.69
SF3A1-208ENST00000485618 DCTN1Q14203 1278 aa10.76□□□□□ -0.69
SF3A1-208ENST00000485618 FLAD1Q8NFF5 587 aa10.76□□□□□ -0.69
SF3A1-208ENST00000485618 TSPYL4Q9UJ04 414 aa10.76□□□□□ -0.69
SF3A1-208ENST00000485618 COL23A1Q86Y22 540 aaPredicted RBP10.75□□□□□ -0.69
SF3A1-208ENST00000485618 WDR63Q8IWG1 891 aa10.75□□□□□ -0.69
SF3A1-208ENST00000485618 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
SF3A1-208ENST00000485618 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
SF3A1-208ENST00000485618 LAS1LQ9Y4W2 734 aaKnown RBP10.75□□□□□ -0.69
SF3A1-208ENST00000485618 SCN11AQ9UI33 1791 aa10.75□□□□□ -0.69
SF3A1-208ENST00000485618 SNRPA1P09661 255 aaKnown RBP10.74□□□□□ -0.69
SF3A1-208ENST00000485618 YBX3P16989 372 aaKnown RBP eCLIP10.74□□□□□ -0.69
SF3A1-208ENST00000485618 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 AK7Q96M32 723 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 IFT57Q9NWB7 429 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 IL16Q14005 1332 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 ITGB4P16144 1822 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 MRC1P22897 1456 aa10.74□□□□□ -0.69
SF3A1-208ENST00000485618 TOGARAM1Q9Y4F4 1720 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms