RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 C8orf58Q8NAV2 365 aa20.85■□□□□ 0.93
ZNF248-206ENST00000485560 THSD7AQ9UPZ6 1657 aa20.85■□□□□ 0.93
ZNF248-206ENST00000485560 BTBD11A6QL63 1104 aa20.84■□□□□ 0.93
ZNF248-206ENST00000485560 CT47B1P0C2W7 299 aaPredicted RBP20.84■□□□□ 0.93
ZNF248-206ENST00000485560 KRT24Q2M2I5 525 aa20.84■□□□□ 0.93
ZNF248-206ENST00000485560 NFATC2IPQ8NCF5 419 aa20.84■□□□□ 0.93
ZNF248-206ENST00000485560 ITGB4P16144 1822 aa20.84■□□□□ 0.93
ZNF248-206ENST00000485560 ELL2O00472 640 aaPredicted RBP20.84■□□□□ 0.93
ZNF248-206ENST00000485560 QTRT2Q9H974 415 aaKnown RBP20.84■□□□□ 0.93
ZNF248-206ENST00000485560 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.92
ZNF248-206ENST00000485560 CABP4P57796 275 aa20.82■□□□□ 0.92
ZNF248-206ENST00000485560 TWISTNBQ3B726 338 aaPredicted RBP20.82■□□□□ 0.92
ZNF248-206ENST00000485560 ERVV-2B6SEH9 535 aa20.81■□□□□ 0.92
ZNF248-206ENST00000485560 KCNQ3O43525 872 aa20.81■□□□□ 0.92
ZNF248-206ENST00000485560 VAMP4O75379 141 aa20.81■□□□□ 0.92
ZNF248-206ENST00000485560 RARSP54136 660 aaKnown RBP20.81■□□□□ 0.92
ZNF248-206ENST00000485560 RGS17Q9UGC6 210 aaPredicted RBP20.81■□□□□ 0.92
ZNF248-206ENST00000485560 BCAR3O75815 825 aa20.81■□□□□ 0.92
ZNF248-206ENST00000485560 A0A0G2JS52 829 aa20.8■□□□□ 0.92
ZNF248-206ENST00000485560 MYT1Q01538 1121 aa20.8■□□□□ 0.92
ZNF248-206ENST00000485560 MARCH10Q8NA82 808 aaPredicted RBP20.8■□□□□ 0.92
ZNF248-206ENST00000485560 DOT1LQ8TEK3 1739 aa20.8■□□□□ 0.92
ZNF248-206ENST00000485560 RRP1P56182 461 aaKnown RBP20.78■□□□□ 0.92
ZNF248-206ENST00000485560 BCL2L13Q9BXK5 485 aa20.78■□□□□ 0.92
ZNF248-206ENST00000485560 ONECUT3O60422 494 aaPredicted RBP20.78■□□□□ 0.92
ZNF248-206ENST00000485560 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
ZNF248-206ENST00000485560 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
ZNF248-206ENST00000485560 ZNF772Q68DY9 489 aaPredicted RBP20.77■□□□□ 0.92
ZNF248-206ENST00000485560 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
ZNF248-206ENST00000485560 SSH1Q8WYL5 1049 aa20.76■□□□□ 0.91
ZNF248-206ENST00000485560 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
ZNF248-206ENST00000485560 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
ZNF248-206ENST00000485560 PLIN1O60240 522 aa20.75■□□□□ 0.91
ZNF248-206ENST00000485560 IRX6P78412 446 aaPredicted RBP20.75■□□□□ 0.91
ZNF248-206ENST00000485560 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
ZNF248-206ENST00000485560 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
ZNF248-206ENST00000485560 ALDH1L2Q3SY69 923 aa20.74■□□□□ 0.91
ZNF248-206ENST00000485560 SMC4Q9NTJ3 1288 aa20.74■□□□□ 0.91
ZNF248-206ENST00000485560 TMOD3Q9NYL9 352 aa20.74■□□□□ 0.91
ZNF248-206ENST00000485560 TCERG1O14776 1098 aaKnown RBP20.73■□□□□ 0.91
ZNF248-206ENST00000485560 NEFLP07196 543 aa20.73■□□□□ 0.91
ZNF248-206ENST00000485560 BRWD3Q6RI45 1802 aa20.73■□□□□ 0.91
ZNF248-206ENST00000485560 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
ZNF248-206ENST00000485560 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
ZNF248-206ENST00000485560 CACNA1FO60840 1977 aa20.72■□□□□ 0.91
ZNF248-206ENST00000485560 TTC5Q8N0Z6 440 aa20.72■□□□□ 0.91
ZNF248-206ENST00000485560 PIGBQ92521 554 aa20.72■□□□□ 0.91
ZNF248-206ENST00000485560 C5P01031 1676 aa20.72■□□□□ 0.91
ZNF248-206ENST00000485560 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
ZNF248-206ENST00000485560 PRIM1P49642 420 aaKnown RBP20.71■□□□□ 0.91
ZNF248-206ENST00000485560 BCL9O00512 1426 aa20.71■□□□□ 0.91
ZNF248-206ENST00000485560 FKBP8Q14318 412 aa20.7■□□□□ 0.9
ZNF248-206ENST00000485560 POTEAQ6S8J7 498 aa20.7■□□□□ 0.9
ZNF248-206ENST00000485560 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 SYTL4Q96C24 671 aaPredicted RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
ZNF248-206ENST00000485560 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 FRAT1Q92837 279 aaPredicted RBP20.7■□□□□ 0.9
ZNF248-206ENST00000485560 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
ZNF248-206ENST00000485560 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
ZNF248-206ENST00000485560 HOXB7P09629 217 aa20.68■□□□□ 0.9
ZNF248-206ENST00000485560 BRPF1P55201 1214 aaPredicted RBP20.68■□□□□ 0.9
ZNF248-206ENST00000485560 FAM182BQ5T319 152 aa20.68■□□□□ 0.9
ZNF248-206ENST00000485560 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
ZNF248-206ENST00000485560 SBF2Q86WG5 1849 aa20.68■□□□□ 0.9
ZNF248-206ENST00000485560 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
ZNF248-206ENST00000485560 ASAP1Q9ULH1 1129 aa20.67■□□□□ 0.9
ZNF248-206ENST00000485560 CANXP27824 592 aaKnown RBP20.67■□□□□ 0.9
ZNF248-206ENST00000485560 C20orf194Q5TEA3 1177 aa20.67■□□□□ 0.9
ZNF248-206ENST00000485560 ATG3Q9NT62 314 aa20.67■□□□□ 0.9
ZNF248-206ENST00000485560 EIF2S2P20042 333 aaKnown RBP20.66■□□□□ 0.9
ZNF248-206ENST00000485560 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
ZNF248-206ENST00000485560 CCDC30Q5VVM6 783 aa20.66■□□□□ 0.9
ZNF248-206ENST00000485560 NOB1Q9ULX3 412 aaKnown RBP20.66■□□□□ 0.9
ZNF248-206ENST00000485560 KIF16BQ96L93 1317 aa20.65■□□□□ 0.9
ZNF248-206ENST00000485560 LAMB4A4D0S4 1761 aa20.65■□□□□ 0.9
ZNF248-206ENST00000485560 KCNQ2O43526 872 aa20.64■□□□□ 0.9
ZNF248-206ENST00000485560 PTCD1O75127 700 aaKnown RBP20.64■□□□□ 0.9
ZNF248-206ENST00000485560 TNNQ9UQP3 1299 aa20.64■□□□□ 0.9
ZNF248-206ENST00000485560 NHSQ6T4R5 1651 aa20.64■□□□□ 0.89
ZNF248-206ENST00000485560 SLC4A2P04920 1241 aa20.64■□□□□ 0.89
ZNF248-206ENST00000485560 SNRPA1P09661 255 aaKnown RBP20.64■□□□□ 0.89
ZNF248-206ENST00000485560 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.89
ZNF248-206ENST00000485560 RXRBP28702 533 aa20.63■□□□□ 0.89
ZNF248-206ENST00000485560 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
ZNF248-206ENST00000485560 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 BTAF1O14981 1849 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
ZNF248-206ENST00000485560 TRIM27P14373 513 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 ATF7IPQ6VMQ6 1270 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 KRT27Q7Z3Y8 459 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
ZNF248-206ENST00000485560 PDE3AQ14432 1141 aa20.6■□□□□ 0.89
ZNF248-206ENST00000485560 G2E3Q7L622 706 aa20.6■□□□□ 0.89
ZNF248-206ENST00000485560 PANK1Q8TE04 598 aa20.6■□□□□ 0.89
ZNF248-206ENST00000485560 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
ZNF248-206ENST00000485560 CHPF2Q9P2E5 772 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms