RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 AKAP4Q5JQC9 854 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 C1orf141Q5JVX7 400 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 IFNL2Q8IZJ0 200 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
CDK13-205ENST00000484589 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
CDK13-205ENST00000484589 KDM6AO15550 1401 aaPredicted RBP11.19□□□□□ -0.62
CDK13-205ENST00000484589 WWC1Q8IX03 1113 aa11.19□□□□□ -0.62
CDK13-205ENST00000484589 KRT27Q7Z3Y8 459 aa11.18□□□□□ -0.62
CDK13-205ENST00000484589 ACSBG1Q96GR2 724 aa11.18□□□□□ -0.62
CDK13-205ENST00000484589 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
CDK13-205ENST00000484589 VIRMAQ69YN4 1812 aaKnown RBP11.18□□□□□ -0.62
CDK13-205ENST00000484589 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
CDK13-205ENST00000484589 KCNQ2O43526 872 aa11.18□□□□□ -0.62
CDK13-205ENST00000484589 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
CDK13-205ENST00000484589 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
CDK13-205ENST00000484589 TSHZ2Q9NRE2 1034 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 MIS18AQ9NYP9 233 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 TOGARAM1Q9Y4F4 1720 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 PLEKHG2Q9H7P9 1386 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 NFATC2IPQ8NCF5 419 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 RTF1Q92541 710 aaKnown RBP11.17□□□□□ -0.62
CDK13-205ENST00000484589 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
CDK13-205ENST00000484589 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
CDK13-205ENST00000484589 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
CDK13-205ENST00000484589 SRCAPQ6ZRS2 3230 aa11.16□□□□□ -0.62
CDK13-205ENST00000484589 SYTL4Q96C24 671 aaPredicted RBP11.15□□□□□ -0.62
CDK13-205ENST00000484589 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
CDK13-205ENST00000484589 CCDC27Q2M243 656 aa11.15□□□□□ -0.62
CDK13-205ENST00000484589 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
CDK13-205ENST00000484589 ADAMTS7Q9UKP4 1686 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
CDK13-205ENST00000484589 PIGBQ92521 554 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 FOXD4L1Q9NU39 408 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.14□□□□□ -0.63
CDK13-205ENST00000484589 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
CDK13-205ENST00000484589 ITGB4P16144 1822 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 KCNQ3O43525 872 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
CDK13-205ENST00000484589 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 DOT1LQ8TEK3 1739 aa11.14□□□□□ -0.63
CDK13-205ENST00000484589 CABP4P57796 275 aa11.13□□□□□ -0.63
CDK13-205ENST00000484589 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
CDK13-205ENST00000484589 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 TEFQ10587 303 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
CDK13-205ENST00000484589 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 TRIM37O94972 964 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 ILDR2Q71H61 639 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 ARID3AQ99856 593 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 ASAP1Q9ULH1 1129 aa11.12□□□□□ -0.63
CDK13-205ENST00000484589 TAF7Q15545 349 aaPredicted RBP11.11□□□□□ -0.63
CDK13-205ENST00000484589 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 TMOD3Q9NYL9 352 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
CDK13-205ENST00000484589 BCL9O00512 1426 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 BTBD11A6QL63 1104 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 ZNF853P0CG23 659 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 GOLGA2Q08379 1002 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 WDR63Q8IWG1 891 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 NECTIN2Q92692 538 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 MBIPQ9NS73 344 aa11.11□□□□□ -0.63
CDK13-205ENST00000484589 CHL1O00533 1208 aa11.1□□□□□ -0.63
CDK13-205ENST00000484589 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
CDK13-205ENST00000484589 MRC1P22897 1456 aa11.1□□□□□ -0.63
CDK13-205ENST00000484589 SLFN5Q08AF3 891 aa11.09□□□□□ -0.63
CDK13-205ENST00000484589 ATG3Q9NT62 314 aa11.09□□□□□ -0.63
CDK13-205ENST00000484589 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
CDK13-205ENST00000484589 TSPYL4Q9UJ04 414 aa11.09□□□□□ -0.63
CDK13-205ENST00000484589 PTCD1O75127 700 aaKnown RBP11.08□□□□□ -0.64
CDK13-205ENST00000484589 KCNQ4P56696 695 aa11.08□□□□□ -0.64
CDK13-205ENST00000484589 ZNF790Q6PG37 636 aa11.08□□□□□ -0.64
CDK13-205ENST00000484589 FANCIQ9NVI1 1328 aa11.08□□□□□ -0.64
CDK13-205ENST00000484589 PRAMEF22A3QJZ6 481 aa11.08□□□□□ -0.64
CDK13-205ENST00000484589 ELL2O00472 640 aaPredicted RBP11.08□□□□□ -0.64
CDK13-205ENST00000484589 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
CDK13-205ENST00000484589 TRMT2AQ8IZ69 625 aaKnown RBP11.08□□□□□ -0.64
CDK13-205ENST00000484589 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
CDK13-205ENST00000484589 BTAF1O14981 1849 aa11.07□□□□□ -0.64
CDK13-205ENST00000484589 NHSQ6T4R5 1651 aa11.07□□□□□ -0.64
CDK13-205ENST00000484589 GNAI1P63096 354 aa11.07□□□□□ -0.64
CDK13-205ENST00000484589 ZNF496Q96IT1 587 aaPredicted RBP11.07□□□□□ -0.64
CDK13-205ENST00000484589 SLC4A9Q96Q91 983 aa11.07□□□□□ -0.64
CDK13-205ENST00000484589 IL16Q14005 1332 aa11.07□□□□□ -0.64
CDK13-205ENST00000484589 TSPYL6Q8N831 410 aa11.06□□□□□ -0.64
CDK13-205ENST00000484589 C8orf58Q8NAV2 365 aa11.06□□□□□ -0.64
CDK13-205ENST00000484589 E9PSI1 815 aa11.06□□□□□ -0.64
CDK13-205ENST00000484589 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
CDK13-205ENST00000484589 FGD1P98174 961 aa11.06□□□□□ -0.64
CDK13-205ENST00000484589 CALD1Q05682 793 aaKnown RBP11.06□□□□□ -0.64
CDK13-205ENST00000484589 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
CDK13-205ENST00000484589 EXOSC9Q06265 439 aaKnown RBP11.05□□□□□ -0.64
CDK13-205ENST00000484589 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
CDK13-205ENST00000484589 BCCIPQ9P287 314 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDK13-205ENST00000484589 APBA3O96018 575 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms