RNA–Protein interactions for RNA: ENST00000483773.1

FBXO28-203, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-203ENST00000483773 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
FBXO28-203ENST00000483773 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
FBXO28-203ENST00000483773 BTBD11A6QL63 1104 aa16.71■□□□□ 0.27
FBXO28-203ENST00000483773 RGS17Q9UGC6 210 aaPredicted RBP16.71■□□□□ 0.27
FBXO28-203ENST00000483773 MRC1P22897 1456 aa16.71■□□□□ 0.27
FBXO28-203ENST00000483773 NFATC2IPQ8NCF5 419 aa16.7■□□□□ 0.26
FBXO28-203ENST00000483773 MBIPQ9NS73 344 aa16.7■□□□□ 0.26
FBXO28-203ENST00000483773 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
FBXO28-203ENST00000483773 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
FBXO28-203ENST00000483773 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
FBXO28-203ENST00000483773 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
FBXO28-203ENST00000483773 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
FBXO28-203ENST00000483773 HOXB7P09629 217 aa16.67■□□□□ 0.26
FBXO28-203ENST00000483773 HMGB2P26583 209 aaKnown RBP16.67■□□□□ 0.26
FBXO28-203ENST00000483773 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
FBXO28-203ENST00000483773 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
FBXO28-203ENST00000483773 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
FBXO28-203ENST00000483773 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
FBXO28-203ENST00000483773 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
FBXO28-203ENST00000483773 PRIM1P49642 420 aaKnown RBP16.65■□□□□ 0.26
FBXO28-203ENST00000483773 SMARCC1Q92922 1105 aaPredicted RBP16.65■□□□□ 0.26
FBXO28-203ENST00000483773 TSR2Q969E8 191 aaKnown RBP16.65■□□□□ 0.26
FBXO28-203ENST00000483773 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
FBXO28-203ENST00000483773 PIGBQ92521 554 aa16.64■□□□□ 0.25
FBXO28-203ENST00000483773 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
FBXO28-203ENST00000483773 EIF4A1P60842 406 aaKnown RBP16.63■□□□□ 0.25
FBXO28-203ENST00000483773 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
FBXO28-203ENST00000483773 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
FBXO28-203ENST00000483773 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
FBXO28-203ENST00000483773 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
FBXO28-203ENST00000483773 TWISTNBQ3B726 338 aaPredicted RBP16.62■□□□□ 0.25
FBXO28-203ENST00000483773 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
FBXO28-203ENST00000483773 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
FBXO28-203ENST00000483773 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
FBXO28-203ENST00000483773 VAMP4O75379 141 aa16.61■□□□□ 0.25
FBXO28-203ENST00000483773 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
FBXO28-203ENST00000483773 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
FBXO28-203ENST00000483773 HEG1Q9ULI3 1381 aa16.61■□□□□ 0.25
FBXO28-203ENST00000483773 SNRPA1P09661 255 aaKnown RBP16.6■□□□□ 0.25
FBXO28-203ENST00000483773 ITGB4P16144 1822 aa16.6■□□□□ 0.25
FBXO28-203ENST00000483773 GIGYF1O75420 1035 aaPredicted RBP16.59■□□□□ 0.25
FBXO28-203ENST00000483773 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
FBXO28-203ENST00000483773 C8orf58Q8NAV2 365 aa16.59■□□□□ 0.25
FBXO28-203ENST00000483773 RGS12O14924 1447 aa16.59■□□□□ 0.25
FBXO28-203ENST00000483773 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
FBXO28-203ENST00000483773 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
FBXO28-203ENST00000483773 BRPF1P55201 1214 aaPredicted RBP16.58■□□□□ 0.24
FBXO28-203ENST00000483773 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
FBXO28-203ENST00000483773 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
FBXO28-203ENST00000483773 ATG3Q9NT62 314 aa16.58■□□□□ 0.24
FBXO28-203ENST00000483773 BRWD3Q6RI45 1802 aa16.58■□□□□ 0.24
FBXO28-203ENST00000483773 SLC39A6Q13433 755 aa16.57■□□□□ 0.24
FBXO28-203ENST00000483773 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
FBXO28-203ENST00000483773 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
FBXO28-203ENST00000483773 NHSQ6T4R5 1651 aa16.56■□□□□ 0.24
FBXO28-203ENST00000483773 ERBB4Q15303 1308 aa16.56■□□□□ 0.24
FBXO28-203ENST00000483773 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
FBXO28-203ENST00000483773 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
FBXO28-203ENST00000483773 PAPPAQ13219 1627 aa16.56■□□□□ 0.24
FBXO28-203ENST00000483773 KCNQ3O43525 872 aa16.55■□□□□ 0.24
FBXO28-203ENST00000483773 KCNQ2O43526 872 aa16.55■□□□□ 0.24
FBXO28-203ENST00000483773 TSPYL6Q8N831 410 aa16.55■□□□□ 0.24
FBXO28-203ENST00000483773 UBR2Q8IWV8 1755 aa16.54■□□□□ 0.24
FBXO28-203ENST00000483773 ELL2O00472 640 aaPredicted RBP16.54■□□□□ 0.24
FBXO28-203ENST00000483773 IPO8O15397 1037 aaKnown RBP16.54■□□□□ 0.24
FBXO28-203ENST00000483773 STARD3NLO95772 234 aa16.54■□□□□ 0.24
FBXO28-203ENST00000483773 SBF2Q86WG5 1849 aa16.54■□□□□ 0.24
FBXO28-203ENST00000483773 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
FBXO28-203ENST00000483773 PTCD1O75127 700 aaKnown RBP16.53■□□□□ 0.24
FBXO28-203ENST00000483773 MS4A1P11836 297 aa16.53■□□□□ 0.24
FBXO28-203ENST00000483773 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
FBXO28-203ENST00000483773 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
FBXO28-203ENST00000483773 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
FBXO28-203ENST00000483773 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 LOC102724428A0A0B4J2F2 783 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 SIK1P57059 783 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
FBXO28-203ENST00000483773 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.24
FBXO28-203ENST00000483773 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.23
FBXO28-203ENST00000483773 PLSCR1O15162 318 aa16.51■□□□□ 0.23
FBXO28-203ENST00000483773 KRT24Q2M2I5 525 aa16.51■□□□□ 0.23
FBXO28-203ENST00000483773 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
FBXO28-203ENST00000483773 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
FBXO28-203ENST00000483773 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
FBXO28-203ENST00000483773 RNF123Q5XPI4 1314 aa16.5■□□□□ 0.23
FBXO28-203ENST00000483773 TRIM37O94972 964 aa16.5■□□□□ 0.23
FBXO28-203ENST00000483773 SLC27A3Q5K4L6 730 aa16.5■□□□□ 0.23
FBXO28-203ENST00000483773 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
FBXO28-203ENST00000483773 SLC4A2P04920 1241 aa16.49■□□□□ 0.23
FBXO28-203ENST00000483773 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
FBXO28-203ENST00000483773 BTAF1O14981 1849 aa16.49■□□□□ 0.23
FBXO28-203ENST00000483773 PTPRCP08575 1304 aa16.48■□□□□ 0.23
FBXO28-203ENST00000483773 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
FBXO28-203ENST00000483773 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
FBXO28-203ENST00000483773 SUPT16HQ9Y5B9 1047 aaKnown RBP16.48■□□□□ 0.23
FBXO28-203ENST00000483773 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
FBXO28-203ENST00000483773 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms