RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, human

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3YL1-222	ENST00000479739	NBPF4	Q96M43	638 aa		11.49	□□□□□ -0.57
SH3YL1-222	ENST00000479739	TBC1D32	Q96NH3	1257 aa		11.49	□□□□□ -0.57
SH3YL1-222	ENST00000479739	SRCAP	Q6ZRS2	3230 aa		11.49	□□□□□ -0.57
SH3YL1-222	ENST00000479739	MEGF6	O75095	1541 aa		11.48	□□□□□ -0.57
SH3YL1-222	ENST00000479739	MORC1	Q86VD1	984 aa		11.48	□□□□□ -0.57
SH3YL1-222	ENST00000479739	PANK1	Q8TE04	598 aa		11.48	□□□□□ -0.57
SH3YL1-222	ENST00000479739	ANTXR1	Q9H6X2	564 aa		11.48	□□□□□ -0.57
SH3YL1-222	ENST00000479739	EXOC5	O00471	708 aa		11.47	□□□□□ -0.57
SH3YL1-222	ENST00000479739	TNNT2	P45379	298 aa	Predicted RBP	11.47	□□□□□ -0.57
SH3YL1-222	ENST00000479739	CFAP53	Q96M91	514 aa		11.47	□□□□□ -0.57
SH3YL1-222	ENST00000479739	MYH16	Q9H6N6	1097 aa		11.47	□□□□□ -0.57
SH3YL1-222	ENST00000479739	DEFB132	Q7Z7B7	95 aa		11.47	□□□□□ -0.57
SH3YL1-222	ENST00000479739	TRIM37	O94972	964 aa		11.46	□□□□□ -0.57
SH3YL1-222	ENST00000479739	SEC24B	O95487	1268 aa		11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	SF3B2	Q13435	895 aa	Known RBP	11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	RGPD4	Q7Z3J3	1758 aa		11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	NHS	Q6T4R5	1651 aa		11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	USHBP1	Q8N6Y0	703 aa		11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	PKD1L3	Q7Z443	1732 aa		11.45	□□□□□ -0.58
SH3YL1-222	ENST00000479739	BAG6	P46379	1132 aa		11.44	□□□□□ -0.58
SH3YL1-222	ENST00000479739	EIF4A2	Q14240	407 aa	Known RBP	11.44	□□□□□ -0.58
SH3YL1-222	ENST00000479739	PDZRN3	Q9UPQ7	1066 aa		11.44	□□□□□ -0.58
SH3YL1-222	ENST00000479739	RREB1	Q92766	1687 aa		11.44	□□□□□ -0.58
SH3YL1-222	ENST00000479739	EYA1	Q99502	592 aa		11.44	□□□□□ -0.58
SH3YL1-222	ENST00000479739	MVP	Q14764	893 aa	Known RBP	11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	TBC1D2	Q9BYX2	928 aa		11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	SLK	Q9H2G2	1235 aa	Predicted RBP	11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	PCDHB15	Q9Y5E8	787 aa		11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	ISY1	Q9ULR0	285 aa	Known RBP	11.43	□□□□□ -0.58
SH3YL1-222	ENST00000479739	EN1	Q05925	392 aa	Predicted RBP	11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	ZKSCAN2	Q63HK3	967 aa		11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	PTF1A	Q7RTS3	328 aa		11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	CAMKK2	Q96RR4	588 aa		11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	IGSF1	Q8N6C5	1336 aa		11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	PLEKHG2	Q9H7P9	1386 aa		11.42	□□□□□ -0.58
SH3YL1-222	ENST00000479739	GLIPR1L2	Q4G1C9	344 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	ZCRB1	Q8TBF4	217 aa	Known RBP	11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	RAPGEF4	Q8WZA2	1011 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	CHMP5	Q9NZZ3	219 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	APBA3	O96018	575 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	HDAC1	Q13547	482 aa	Predicted RBP	11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	NUP188	Q5SRE5	1749 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	DOT1L	Q8TEK3	1739 aa		11.41	□□□□□ -0.58
SH3YL1-222	ENST00000479739	GOLGA6L3	A6NEY3	463 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	TAT	P17735	454 aa	Predicted RBP	11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	MTHFS	P49914	203 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	DZIP1L	Q8IYY4	767 aa	Known RBP	11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	BTAF1	O14981	1849 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	COL3A1	P02461	1466 aa	Predicted RBP	11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	RLBP1	P12271	317 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	MCM4	P33991	863 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	EZH2	Q15910	746 aa	Known RBP	11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	FTSJ3	Q8IY81	847 aa	Known RBP	11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	DDX19B	Q9UMR2	479 aa		11.4	□□□□□ -0.58
SH3YL1-222	ENST00000479739	FSD2	A1L4K1	749 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PLSCR1	O15162	318 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	KCNQ2	O43526	872 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	IL13	P35225	146 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	DDX54	Q8TDD1	881 aa	Known RBP	11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	C22orf23	Q9BZE7	217 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	KDR	P35968	1356 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	DDX11L8	A8MPP1	907 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	NEUROD2	Q15784	382 aa		11.39	□□□□□ -0.59
SH3YL1-222	ENST00000479739	IL16	Q14005	1332 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PCDH11X	Q9BZA7	1347 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PCDH11Y	Q9BZA8	1340 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	TOGARAM1	Q9Y4F4	1720 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PTMS	P20962	102 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.38	□□□□□ -0.59	2e-7	■■□□□ 12.7
SH3YL1-222	ENST00000479739	KAT6B	Q8WYB5	2073 aa		11.38	□□□□□ -0.59
SH3YL1-222	ENST00000479739	CYP27B1	O15528	508 aa		11.37	□□□□□ -0.59
SH3YL1-222	ENST00000479739	ACSBG1	Q96GR2	724 aa		11.37	□□□□□ -0.59
SH3YL1-222	ENST00000479739	HSCB	Q8IWL3	235 aa		11.37	□□□□□ -0.59
SH3YL1-222	ENST00000479739	RRP7A	Q9Y3A4	280 aa	Known RBP	11.37	□□□□□ -0.59
SH3YL1-222	ENST00000479739	MRE11	P49959	708 aa		11.36	□□□□□ -0.59
SH3YL1-222	ENST00000479739	AEBP1	Q8IUX7	1158 aa		11.36	□□□□□ -0.59
SH3YL1-222	ENST00000479739	SMC5	Q8IY18	1101 aa		11.36	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PROM2	Q8N271	834 aa		11.36	□□□□□ -0.59
SH3YL1-222	ENST00000479739	PNN	Q9H307	717 aa	Known RBP	11.36	□□□□□ -0.59
SH3YL1-222	ENST00000479739	ITGB4	P16144	1822 aa		11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	NKX1-1	Q15270	411 aa	Predicted RBP	11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	SNX21	Q969T3	373 aa		11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	CHMP4B	Q9H444	224 aa	Known RBP	11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	KIF16B	Q96L93	1317 aa		11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	LY75	O60449	1722 aa		11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	SPG7	Q9UQ90	795 aa		11.35	□□□□□ -0.59
SH3YL1-222	ENST00000479739	IPO8	O15397	1037 aa	Known RBP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	TRAK2	O60296	914 aa		11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	DIAPH1	O60610	1272 aa	Known RBP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	XRCC6	P12956	609 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	RBM25	P49756	843 aa	Known RBP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	ATF7IP	Q6VMQ6	1270 aa		11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	BCL2L13	Q9BXK5	485 aa		11.34	□□□□□ -0.59
SH3YL1-222	ENST00000479739	SMC4	Q9NTJ3	1288 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms