RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 BAG6P46379 1132 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 RRP1P56182 461 aaKnown RBP7.95□□□□□ -1.14
LRRC47-203ENST00000479239 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
LRRC47-203ENST00000479239 SEPT12Q8IYM1 358 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
LRRC47-203ENST00000479239 PXDNQ92626 1479 aa7.94□□□□□ -1.14
LRRC47-203ENST00000479239 SLIT3O75094 1523 aa7.94□□□□□ -1.14
LRRC47-203ENST00000479239 NFAT5O94916 1531 aa7.94□□□□□ -1.14
LRRC47-203ENST00000479239 C1QTNF8P60827 252 aa7.94□□□□□ -1.14
LRRC47-203ENST00000479239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.94□□□□□ -1.14
LRRC47-203ENST00000479239 TRPM3Q9HCF6 1732 aaPredicted RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 PRKAR2AP13861 404 aaKnown RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 EN1Q05925 392 aaPredicted RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 UNC5CLQ8IV45 518 aa7.93□□□□□ -1.14
LRRC47-203ENST00000479239 GAS2L2Q8NHY3 880 aa7.93□□□□□ -1.14
LRRC47-203ENST00000479239 ANKRD24Q8TF21 1146 aa7.93□□□□□ -1.14
LRRC47-203ENST00000479239 TSR2Q969E8 191 aaKnown RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 THUMPD2Q9BTF0 503 aaKnown RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 LAS1LQ9Y4W2 734 aaKnown RBP7.93□□□□□ -1.14
LRRC47-203ENST00000479239 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
LRRC47-203ENST00000479239 KDRP35968 1356 aa7.93□□□□□ -1.14
LRRC47-203ENST00000479239 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
LRRC47-203ENST00000479239 PPP1R37O75864 691 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 MTHFSDQ2M296 383 aaKnown RBP7.92□□□□□ -1.14
LRRC47-203ENST00000479239 NBPF6Q5VWK0 638 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 KRT27Q7Z3Y8 459 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 USHBP1Q8N6Y0 703 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.92□□□□□ -1.14
LRRC47-203ENST00000479239 RTF1Q92541 710 aaKnown RBP7.92□□□□□ -1.14
LRRC47-203ENST00000479239 NBPF4Q96M43 638 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
LRRC47-203ENST00000479239 FAM83GA6ND36 823 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
LRRC47-203ENST00000479239 PLIN1O60240 522 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 GNAI1P63096 354 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 EXOSC9Q06265 439 aaKnown RBP7.91□□□□□ -1.14
LRRC47-203ENST00000479239 DCTN1Q14203 1278 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 IFNL1Q8IU54 200 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 IFT57Q9NWB7 429 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 PPP4R2Q9NY27 417 aa7.91□□□□□ -1.14
LRRC47-203ENST00000479239 NWD2Q9ULI1 1742 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 PLCH1Q4KWH8 1693 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 RREB1Q92766 1687 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 ALS2Q96Q42 1657 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 KIAA0232Q92628 1395 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 HTATSF1O43719 755 aaKnown RBP7.9□□□□□ -1.14
LRRC47-203ENST00000479239 BCAR3O75815 825 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 CT47B1P0C2W7 299 aaPredicted RBP7.9□□□□□ -1.14
LRRC47-203ENST00000479239 ZNF853P0CG23 659 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 CSB-PGBD3P0DP91 1061 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 RARSP54136 660 aaKnown RBP7.9□□□□□ -1.14
LRRC47-203ENST00000479239 CHRNA2Q15822 529 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 MCM10Q7L590 875 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 EFCAB3Q8N7B9 438 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 NLRP2Q9NX02 1062 aa7.9□□□□□ -1.14
LRRC47-203ENST00000479239 NUP188Q5SRE5 1749 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 CPDO75976 1380 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 GNAT3A8MTJ3 354 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 CANXP27824 592 aaKnown RBP7.89□□□□□ -1.15
LRRC47-203ENST00000479239 TMEM132AQ24JP5 1023 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 PLEKHO1Q53GL0 409 aaPredicted RBP7.89□□□□□ -1.15
LRRC47-203ENST00000479239 SP7Q8TDD2 431 aaPredicted RBP7.89□□□□□ -1.15
LRRC47-203ENST00000479239 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 CHD4Q14839 1912 aa7.89□□□□□ -1.15
LRRC47-203ENST00000479239 ERBB3P21860 1342 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 MAP3K13O43283 966 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 VPS72Q15906 364 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 EZH2Q15910 746 aaKnown RBP7.88□□□□□ -1.15
LRRC47-203ENST00000479239 AMOTQ4VCS5 1084 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 FBXO22Q8NEZ5 403 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 EXOC6Q8TAG9 804 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 MBIPQ9NS73 344 aa7.88□□□□□ -1.15
LRRC47-203ENST00000479239 MAP3K5Q99683 1374 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 CHL1O00533 1208 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.15
LRRC47-203ENST00000479239 E2F4Q16254 413 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 C20orf194Q5TEA3 1177 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
LRRC47-203ENST00000479239 RAPGEF4Q8WZA2 1011 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 FRAT1Q92837 279 aaPredicted RBP7.87□□□□□ -1.15
LRRC47-203ENST00000479239 ARHGEF1Q92888 912 aaKnown RBP7.87□□□□□ -1.15
LRRC47-203ENST00000479239 CAMKK2Q96RR4 588 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 CRBNQ96SW2 442 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 PHRF1Q9P1Y6 1649 aaKnown RBP7.87□□□□□ -1.15
LRRC47-203ENST00000479239 LTN1O94822 1766 aa7.87□□□□□ -1.15
LRRC47-203ENST00000479239 NRAPQ86VF7 1730 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 VAMP4O75379 141 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 TATP17735 454 aaPredicted RBP7.86□□□□□ -1.15
LRRC47-203ENST00000479239 EVA1CP58658 441 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 PDE3AQ14432 1141 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 B4GALNT3Q6L9W6 998 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 PELP1Q8IZL8 1130 aaKnown RBP7.86□□□□□ -1.15
LRRC47-203ENST00000479239 IL17REQ8NFR9 667 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 SSH1Q8WYL5 1049 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 KIF12Q96FN5 646 aa7.86□□□□□ -1.15
LRRC47-203ENST00000479239 CCDC136Q96JN2 1154 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms