RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MRC1P22897 1456 aa27.12■■□□□ 1.93
VARS-224ENST00000479051 TEFQ10587 303 aa27.11■■□□□ 1.93
VARS-224ENST00000479051 VIRMAQ69YN4 1812 aaKnown RBP27.11■■□□□ 1.93
VARS-224ENST00000479051 LOC102724428A0A0B4J2F2 783 aa27.1■■□□□ 1.93
VARS-224ENST00000479051 HTATSF1O43719 755 aaKnown RBP27.1■■□□□ 1.93
VARS-224ENST00000479051 SIK1P57059 783 aa27.1■■□□□ 1.93
VARS-224ENST00000479051 SLC15A2Q16348 729 aa27.1■■□□□ 1.93
VARS-224ENST00000479051 PAPPAQ13219 1627 aa27.09■■□□□ 1.93
VARS-224ENST00000479051 KCNQ4P56696 695 aa27.09■■□□□ 1.93
VARS-224ENST00000479051 NFE2L2Q16236 605 aa27.08■■□□□ 1.93
VARS-224ENST00000479051 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
VARS-224ENST00000479051 RBM42Q9BTD8 480 aaKnown RBP27.07■■□□□ 1.92
VARS-224ENST00000479051 ADAMTS8Q9UP79 889 aa27.07■■□□□ 1.92
VARS-224ENST00000479051 CEMIPQ8WUJ3 1361 aa27.06■■□□□ 1.92
VARS-224ENST00000479051 ATP6V1AP38606 617 aa27.05■■□□□ 1.92
VARS-224ENST00000479051 RUNDC1Q96C34 613 aa27.05■■□□□ 1.92
VARS-224ENST00000479051 MRS2Q9HD23 443 aa27.05■■□□□ 1.92
VARS-224ENST00000479051 C5P01031 1676 aa27.03■■□□□ 1.92
VARS-224ENST00000479051 ZNF827Q17R98 1081 aa27.03■■□□□ 1.92
VARS-224ENST00000479051 MCM10Q7L590 875 aa27.03■■□□□ 1.92
VARS-224ENST00000479051 CCDC146Q8IYE0 955 aa27.03■■□□□ 1.92
VARS-224ENST00000479051 AKT1S1Q96B36 256 aa27.03■■□□□ 1.92
VARS-224ENST00000479051 PTCD1O75127 700 aaKnown RBP27.02■■□□□ 1.92
VARS-224ENST00000479051 TTC5Q8N0Z6 440 aa27.02■■□□□ 1.92
VARS-224ENST00000479051 TFCP2L1Q9NZI6 479 aa27.02■■□□□ 1.92
VARS-224ENST00000479051 LMOD3Q0VAK6 560 aa27.01■■□□□ 1.91
VARS-224ENST00000479051 TAF1LQ8IZX4 1826 aa27■■□□□ 1.91
VARS-224ENST00000479051 AK7Q96M32 723 aa27■■□□□ 1.91
VARS-224ENST00000479051 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
VARS-224ENST00000479051 RIPK4P57078 832 aa26.99■■□□□ 1.91
VARS-224ENST00000479051 SLC39A6Q13433 755 aa26.99■■□□□ 1.91
VARS-224ENST00000479051 CCDC184Q52MB2 194 aa26.99■■□□□ 1.91
VARS-224ENST00000479051 DLG5Q8TDM6 1919 aa26.98■■□□□ 1.91
VARS-224ENST00000479051 TMPOP42166 694 aaKnown RBP26.98■■□□□ 1.91
VARS-224ENST00000479051 DCTN1Q14203 1278 aa26.98■■□□□ 1.91
VARS-224ENST00000479051 C4BP0C0L5 1744 aa26.97■■□□□ 1.91
VARS-224ENST00000479051 BTBD11A6QL63 1104 aa26.97■■□□□ 1.91
VARS-224ENST00000479051 ITPK1Q13572 414 aa26.97■■□□□ 1.91
VARS-224ENST00000479051 SIPA1L3O60292 1781 aaPredicted RBP26.97■■□□□ 1.91
VARS-224ENST00000479051 LINC00116Q8NCU8 138 aa26.96■■□□□ 1.91
VARS-224ENST00000479051 ZNF790Q6PG37 636 aa26.95■■□□□ 1.9
VARS-224ENST00000479051 FLAD1Q8NFF5 587 aa26.95■■□□□ 1.9
VARS-224ENST00000479051 SLC4A9Q96Q91 983 aa26.95■■□□□ 1.9
VARS-224ENST00000479051 QSER1Q2KHR3 1735 aa26.95■■□□□ 1.9
VARS-224ENST00000479051 PNISRQ8TF01 805 aaKnown RBP26.94■■□□□ 1.9
VARS-224ENST00000479051 TAF7Q15545 349 aaPredicted RBP26.93■■□□□ 1.9
VARS-224ENST00000479051 NEUROD2Q15784 382 aa26.93■■□□□ 1.9
VARS-224ENST00000479051 CASZ1Q86V15 1759 aa26.93■■□□□ 1.9
VARS-224ENST00000479051 KCPQ6ZWJ8 1503 aa26.92■■□□□ 1.9
VARS-224ENST00000479051 VSIG10Q8N0Z9 540 aa26.92■■□□□ 1.9
VARS-224ENST00000479051 RRP7AQ9Y3A4 280 aaKnown RBP26.92■■□□□ 1.9
VARS-224ENST00000479051 PNPLA7Q6ZV29 1317 aa26.91■■□□□ 1.9
VARS-224ENST00000479051 FMNL2Q96PY5 1086 aa26.91■■□□□ 1.9
VARS-224ENST00000479051 SPON1Q9HCB6 807 aa26.91■■□□□ 1.9
VARS-224ENST00000479051 CNTNAP4Q9C0A0 1308 aa26.9■■□□□ 1.9
VARS-224ENST00000479051 CICQ96RK0 1608 aaPredicted RBP26.9■■□□□ 1.9
VARS-224ENST00000479051 UBR2Q8IWV8 1755 aa26.9■■□□□ 1.9
VARS-224ENST00000479051 GNPATO15228 680 aa26.9■■□□□ 1.9
VARS-224ENST00000479051 MSH5O43196 834 aa26.9■■□□□ 1.9
VARS-224ENST00000479051 RC3H1Q5TC82 1133 aaKnown RBP26.9■■□□□ 1.9
VARS-224ENST00000479051 SLC16A10Q8TF71 515 aa26.9■■□□□ 1.9
VARS-224ENST00000479051 TUBGCP6Q96RT7 1819 aa26.89■■□□□ 1.9
VARS-224ENST00000479051 THUMPD2Q9BTF0 503 aaKnown RBP26.89■■□□□ 1.9
VARS-224ENST00000479051 PDGFDQ9GZP0 370 aaPredicted RBP26.89■■□□□ 1.9
VARS-224ENST00000479051 COL5A3P25940 1745 aaPredicted RBP26.89■■□□□ 1.9
VARS-224ENST00000479051 LRP5O75197 1615 aa26.88■■□□□ 1.89
VARS-224ENST00000479051 ZBTB7AO95365 584 aa26.88■■□□□ 1.89
VARS-224ENST00000479051 SSFA2P28290 1259 aa26.88■■□□□ 1.89
VARS-224ENST00000479051 DNAJC10Q8IXB1 793 aa26.88■■□□□ 1.89
VARS-224ENST00000479051 ZNF496Q96IT1 587 aaPredicted RBP26.88■■□□□ 1.89
VARS-224ENST00000479051 TEX13AQ9BXU3 409 aaPredicted RBP26.88■■□□□ 1.89
VARS-224ENST00000479051 MTFR1LQ9H019 292 aa26.88■■□□□ 1.89
VARS-224ENST00000479051 HEG1Q9ULI3 1381 aa26.87■■□□□ 1.89
VARS-224ENST00000479051 APAF1O14727 1248 aa26.87■■□□□ 1.89
VARS-224ENST00000479051 RTCBQ9Y3I0 505 aaKnown RBP26.87■■□□□ 1.89
VARS-224ENST00000479051 TJP1Q07157 1748 aa26.87■■□□□ 1.89
VARS-224ENST00000479051 PHF14O94880 888 aa26.86■■□□□ 1.89
VARS-224ENST00000479051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.85■■□□□ 1.89
VARS-224ENST00000479051 STARD3NLO95772 234 aa26.85■■□□□ 1.89
VARS-224ENST00000479051 CRKLP46109 303 aaKnown RBP26.85■■□□□ 1.89
VARS-224ENST00000479051 COL23A1Q86Y22 540 aaPredicted RBP26.85■■□□□ 1.89
VARS-224ENST00000479051 UBR3Q6ZT12 1888 aa26.85■■□□□ 1.89
VARS-224ENST00000479051 KCNQ3O43525 872 aa26.84■■□□□ 1.89
VARS-224ENST00000479051 DIEXFQ68CQ4 756 aaKnown RBP26.84■■□□□ 1.89
VARS-224ENST00000479051 ADRA2BP18089 450 aa26.83■■□□□ 1.89
VARS-224ENST00000479051 CCDC87Q9NVE4 849 aa26.83■■□□□ 1.89
VARS-224ENST00000479051 TRIM35Q9UPQ4 493 aa26.83■■□□□ 1.89
VARS-224ENST00000479051 ATF5Q9Y2D1 282 aaPredicted RBP26.83■■□□□ 1.89
VARS-224ENST00000479051 RPS6KA4O75676 772 aa26.82■■□□□ 1.88
VARS-224ENST00000479051 CYP19A1P11511 503 aaPredicted RBP26.82■■□□□ 1.88
VARS-224ENST00000479051 TRAPPC3LQ5T215 181 aa26.82■■□□□ 1.88
VARS-224ENST00000479051 BABAM1Q9NWV8 329 aa26.82■■□□□ 1.88
VARS-224ENST00000479051 MIS18AQ9NYP9 233 aa26.82■■□□□ 1.88
VARS-224ENST00000479051 CALD1Q05682 793 aaKnown RBP26.81■■□□□ 1.88
VARS-224ENST00000479051 FAM9BQ8IZU0 186 aa26.81■■□□□ 1.88
VARS-224ENST00000479051 TSPYL4Q9UJ04 414 aa26.81■■□□□ 1.88
VARS-224ENST00000479051 SNRPA1P09661 255 aaKnown RBP26.8■■□□□ 1.88
VARS-224ENST00000479051 PPP1R1BQ9UD71 204 aaPredicted RBP26.8■■□□□ 1.88
VARS-224ENST00000479051 CCER2I3L3R5 266 aa26.79■■□□□ 1.88
VARS-224ENST00000479051 POLD1P28340 1107 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms