RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	LRRC4B	Q9NT99	713 aa		12.57	□□□□□ -0.4
SFI1-222	ENST00000478887	NFATC2IP	Q8NCF5	419 aa		12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	RUNDC1	Q96C34	613 aa		12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	ATG3	Q9NT62	314 aa		12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	ASAP1	Q9ULH1	1129 aa		12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	SIPA1L3	O60292	1781 aa	Predicted RBP	12.56	□□□□□ -0.4
SFI1-222	ENST00000478887	CIC	Q96RK0	1608 aa	Predicted RBP	12.55	□□□□□ -0.4
SFI1-222	ENST00000478887	ZNF831	Q5JPB2	1677 aa		12.55	□□□□□ -0.4
SFI1-222	ENST00000478887	PNISR	Q8TF01	805 aa	Known RBP	12.55	□□□□□ -0.4
SFI1-222	ENST00000478887	CCNL1	Q9UK58	526 aa	Predicted RBP	12.55	□□□□□ -0.4
SFI1-222	ENST00000478887	KCP	Q6ZWJ8	1503 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	VIRMA	Q69YN4	1812 aa	Known RBP	12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	LOC102724428	A0A0B4J2F2	783 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	SIK1	P57059	783 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	TEF	Q10587	303 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	NBPF14	Q5TI25	921 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	CCDC146	Q8IYE0	955 aa		12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	RTF1	Q92541	710 aa	Known RBP	12.54	□□□□□ -0.4
SFI1-222	ENST00000478887	TMPO	P42166	694 aa	Known RBP	12.53	□□□□□ -0.4
SFI1-222	ENST00000478887	MCM10	Q7L590	875 aa		12.53	□□□□□ -0.4
SFI1-222	ENST00000478887	C5	P01031	1676 aa		12.53	□□□□□ -0.4
SFI1-222	ENST00000478887	UBR2	Q8IWV8	1755 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	HMGB2	P26583	209 aa	Known RBP	12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	KCNQ4	P56696	695 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	DCTN1	Q14203	1278 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	R3HDM1	Q15032	1099 aa	Known RBP	12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	ZNF827	Q17R98	1081 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	AKT1S1	Q96B36	256 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	SLC4A9	Q96Q91	983 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	DLG5	Q8TDM6	1919 aa		12.52	□□□□□ -0.41
SFI1-222	ENST00000478887	KAT6B	Q8WYB5	2073 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	LMOD3	Q0VAK6	560 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	SLC15A2	Q16348	729 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	DIEXF	Q68CQ4	756 aa	Known RBP	12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	STK32B	Q9NY57	414 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	C4B	P0C0L5	1744 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	TJP1	Q07157	1748 aa		12.51	□□□□□ -0.41
SFI1-222	ENST00000478887	PSD	A5PKW4	1024 aa	Predicted RBP	12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	RIPK4	P57078	832 aa		12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	SLC39A6	Q13433	755 aa		12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	ITPK1	Q13572	414 aa		12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	ZNF790	Q6PG37	636 aa		12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	TAF1L	Q8IZX4	1826 aa		12.5	□□□□□ -0.41
SFI1-222	ENST00000478887	CASZ1	Q86V15	1759 aa		12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	COL5A3	P25940	1745 aa	Predicted RBP	12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	QSER1	Q2KHR3	1735 aa		12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	CCER2	I3L3R5	266 aa		12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	PTCD1	O75127	700 aa	Known RBP	12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	ATP6V1A	P38606	617 aa		12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	LINC00116	Q8NCU8	138 aa		12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	RBM42	Q9BTD8	480 aa	Known RBP	12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	RRP7A	Q9Y3A4	280 aa	Known RBP	12.49	□□□□□ -0.41
SFI1-222	ENST00000478887	BTBD11	A6QL63	1104 aa		12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	APAF1	O14727	1248 aa		12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	TTC5	Q8N0Z6	440 aa		12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	VSIG10	Q8N0Z9	540 aa		12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	THUMPD2	Q9BTF0	503 aa	Known RBP	12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	TRIM35	Q9UPQ4	493 aa		12.48	□□□□□ -0.41
SFI1-222	ENST00000478887	HEG1	Q9ULI3	1381 aa		12.47	□□□□□ -0.41
SFI1-222	ENST00000478887	CNTNAP4	Q9C0A0	1308 aa		12.47	□□□□□ -0.41
SFI1-222	ENST00000478887	TUBGCP6	Q96RT7	1819 aa		12.47	□□□□□ -0.41
SFI1-222	ENST00000478887	TAF7	Q15545	349 aa	Predicted RBP	12.47	□□□□□ -0.41
SFI1-222	ENST00000478887	KDM3B	Q7LBC6	1761 aa		12.47	□□□□□ -0.41
SFI1-222	ENST00000478887	PNPLA7	Q6ZV29	1317 aa		12.46	□□□□□ -0.41
SFI1-222	ENST00000478887	NEUROD2	Q15784	382 aa		12.46	□□□□□ -0.41
SFI1-222	ENST00000478887	NCBP3	Q53F19	620 aa	Known RBP	12.46	□□□□□ -0.41
SFI1-222	ENST00000478887	ZNF496	Q96IT1	587 aa	Predicted RBP	12.46	□□□□□ -0.41
SFI1-222	ENST00000478887	KCNQ3	O43525	872 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	RC3H1	Q5TC82	1133 aa	Known RBP	12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	DNAJC10	Q8IXB1	793 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	AK7	Q96M32	723 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	FMNL2	Q96PY5	1086 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	BABAM1	Q9NWV8	329 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	TFCP2L1	Q9NZI6	479 aa		12.45	□□□□□ -0.42
SFI1-222	ENST00000478887	LRP5	O75197	1615 aa		12.44	□□□□□ -0.42
SFI1-222	ENST00000478887	CCDC27	Q2M243	656 aa		12.44	□□□□□ -0.42
SFI1-222	ENST00000478887	FAM9B	Q8IZU0	186 aa		12.44	□□□□□ -0.42
SFI1-222	ENST00000478887	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.44	□□□□□ -0.42
SFI1-222	ENST00000478887	UBR3	Q6ZT12	1888 aa		12.44	□□□□□ -0.42
SFI1-222	ENST00000478887	GNPAT	O15228	680 aa		12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	CYP19A1	P11511	503 aa	Predicted RBP	12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	SSFA2	P28290	1259 aa		12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	CRKL	P46109	303 aa	Known RBP	12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	AMIGO3	Q86WK7	504 aa		12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	FLAD1	Q8NFF5	587 aa		12.43	□□□□□ -0.42
SFI1-222	ENST00000478887	CHL1	O00533	1208 aa		12.42	□□□□□ -0.42
SFI1-222	ENST00000478887	MIER1	Q8N108	512 aa		12.42	□□□□□ -0.42
SFI1-222	ENST00000478887	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.42	□□□□□ -0.42
SFI1-222	ENST00000478887	MIS18A	Q9NYP9	233 aa		12.42	□□□□□ -0.42
SFI1-222	ENST00000478887	TSPYL4	Q9UJ04	414 aa		12.42	□□□□□ -0.42
SFI1-222	ENST00000478887	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	RPS6KA4	O75676	772 aa		12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	SNRPA1	P09661	255 aa	Known RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	EIF4A1	P60842	406 aa	Known RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	CALD1	Q05682	793 aa	Known RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	INTS5	Q6P9B9	1019 aa	Known RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	COL23A1	Q86Y22	540 aa	Predicted RBP	12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	SLC16A10	Q8TF71	515 aa		12.41	□□□□□ -0.42
SFI1-222	ENST00000478887	CCDC87	Q9NVE4	849 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms