RNA–Protein interactions for RNA: ENST00000477833.5

ARHGEF3-209, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-209ENST00000477833 ELL2O00472 640 aaPredicted RBP6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 TCERG1O14776 1098 aaKnown RBP6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 VAMP4O75379 141 aa6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 RLBP1P12271 317 aa6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 CALD1Q05682 793 aaKnown RBP6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 AMOTQ4VCS5 1084 aa6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 EXOC6Q8TAG9 804 aa6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 CRBNQ96SW2 442 aa6.8□□□□□ -1.32
ARHGEF3-209ENST00000477833 DOT1LQ8TEK3 1739 aa6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 RGS12O14924 1447 aa6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 RTF1Q92541 710 aaKnown RBP6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 TSPYL4Q9UJ04 414 aa6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 UBR2Q8IWV8 1755 aa6.79□□□□□ -1.32
ARHGEF3-209ENST00000477833 THSD7AQ9UPZ6 1657 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 TNS2Q63HR2 1409 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 CT47B1P0C2W7 299 aaPredicted RBP6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 IL2RBP14784 551 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 EVA1CP58658 441 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 TWISTNBQ3B726 338 aaPredicted RBP6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 C1orf141Q5JVX7 400 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 MRPL50Q8N5N7 158 aaKnown RBP6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 PANK1Q8TE04 598 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 SMC4Q9NTJ3 1288 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 ITGB4P16144 1822 aa6.78□□□□□ -1.32
ARHGEF3-209ENST00000477833 SPATA31A1Q5TZJ5 1347 aa6.77□□□□□ -1.32
ARHGEF3-209ENST00000477833 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
ARHGEF3-209ENST00000477833 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
ARHGEF3-209ENST00000477833 KCPQ6ZWJ8 1503 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 TAF7Q15545 349 aaPredicted RBP6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 IFNL2Q8IZJ0 200 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 ZCRB1Q8TBF4 217 aaKnown RBP6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 C8orf37Q96NL8 207 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 SPG7Q9UQ90 795 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 HEG1Q9ULI3 1381 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 LAMB4A4D0S4 1761 aa6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 N4BP2Q86UW6 1770 aaPredicted RBP6.77□□□□□ -1.33
ARHGEF3-209ENST00000477833 SPATA31A6Q5VVP1 1343 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 PCDH11XQ9BZA7 1347 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 PCDH11YQ9BZA8 1340 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 TRIM27P14373 513 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 EIF4A1P60842 406 aaKnown RBP6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 SLC39A6Q13433 755 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 NKX1-1Q15270 411 aaPredicted RBP6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 B4GALNT3Q6L9W6 998 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 G2E3Q7L622 706 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 FRAT1Q92837 279 aaPredicted RBP6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 SLC52A2Q9HAB3 445 aa6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 NOB1Q9ULX3 412 aaKnown RBP6.76□□□□□ -1.33
ARHGEF3-209ENST00000477833 BRPF1P55201 1214 aaPredicted RBP6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 TEFQ10587 303 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 ALDH1L2Q3SY69 923 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 ERICH6BQ5W0A0 696 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 UNC5CLQ8IV45 518 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 DDX54Q8TDD1 881 aaKnown RBP6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 CLUAP1Q96AJ1 413 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 DCAF5Q96JK2 942 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 BABAM1Q9NWV8 329 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 PPP4R2Q9NY27 417 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 COG6Q9Y2V7 657 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 ATRNO75882 1429 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 ABCC4O15439 1325 aa6.75□□□□□ -1.33
ARHGEF3-209ENST00000477833 BTBD11A6QL63 1104 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 PDE3AQ14432 1141 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 VPS72Q15906 364 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 ZKSCAN2Q63HK3 967 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 ATF7IPQ6VMQ6 1270 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 NFATC2IPQ8NCF5 419 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 NECTIN2Q92692 538 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 ZNF428Q96B54 188 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 AFF2P51816 1311 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 KIF16BQ96L93 1317 aa6.74□□□□□ -1.33
ARHGEF3-209ENST00000477833 TJP1Q07157 1748 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 ANXA1P04083 346 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 PROSER3Q2NL68 480 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 ZNF790Q6PG37 636 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 TMEM57Q8N5G2 664 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 MARCH10Q8NA82 808 aaPredicted RBP6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 ZNF496Q96IT1 587 aaPredicted RBP6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 NGLY1Q96IV0 654 aa6.73□□□□□ -1.33
ARHGEF3-209ENST00000477833 CACNA1FO60840 1977 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 GIGYF1O75420 1035 aaPredicted RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 HSP90AB1P08238 724 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 MKRN4PQ13434 485 aaPredicted RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 MVPQ14764 893 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 FAM98CQ17RN3 349 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 HDGFL1Q5TGJ6 251 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 DZIP1LQ8IYY4 767 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 CHPF2Q9P2E5 772 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 USP21Q9UK80 565 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 BCL9O00512 1426 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 KDM2BQ8NHM5 1336 aa6.72□□□□□ -1.33
ARHGEF3-209ENST00000477833 SPDYE2BA6NHP3 402 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms