RNA–Protein interactions for RNA: ENST00000477567.5

MMP11-208, Transcript of matrix metallopeptidase 11, humanhuman

TSL 5

Gene MMP11, Length 929 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-208ENST00000477567 PAPPAQ13219 1627 aa20.42■□□□□ 0.86
MMP11-208ENST00000477567 TEFQ10587 303 aa20.42■□□□□ 0.86
MMP11-208ENST00000477567 PRIM1P49642 420 aaKnown RBP20.41■□□□□ 0.86
MMP11-208ENST00000477567 CABP4P57796 275 aa20.41■□□□□ 0.86
MMP11-208ENST00000477567 TAF7Q15545 349 aaPredicted RBP20.41■□□□□ 0.86
MMP11-208ENST00000477567 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
MMP11-208ENST00000477567 BABAM1Q9NWV8 329 aa20.41■□□□□ 0.86
MMP11-208ENST00000477567 ZNF853P0CG23 659 aa20.4■□□□□ 0.86
MMP11-208ENST00000477567 SRCAPQ6ZRS2 3230 aa20.4■□□□□ 0.86
MMP11-208ENST00000477567 UBR2Q8IWV8 1755 aa20.4■□□□□ 0.86
MMP11-208ENST00000477567 PIGBQ92521 554 aa20.39■□□□□ 0.85
MMP11-208ENST00000477567 ACSBG1Q96GR2 724 aa20.39■□□□□ 0.85
MMP11-208ENST00000477567 CFAP44Q96MT7 982 aa20.39■□□□□ 0.85
MMP11-208ENST00000477567 TMOD3Q9NYL9 352 aa20.39■□□□□ 0.85
MMP11-208ENST00000477567 CHL1O00533 1208 aa20.38■□□□□ 0.85
MMP11-208ENST00000477567 KCNQ2O43526 872 aa20.38■□□□□ 0.85
MMP11-208ENST00000477567 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
MMP11-208ENST00000477567 IFT57Q9NWB7 429 aa20.38■□□□□ 0.85
MMP11-208ENST00000477567 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
MMP11-208ENST00000477567 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
MMP11-208ENST00000477567 GNAI1P63096 354 aa20.36■□□□□ 0.85
MMP11-208ENST00000477567 PTF1AQ7RTS3 328 aa20.35■□□□□ 0.85
MMP11-208ENST00000477567 SYTL4Q96C24 671 aaPredicted RBP20.35■□□□□ 0.85
MMP11-208ENST00000477567 LY75O60449 1722 aa20.35■□□□□ 0.85
MMP11-208ENST00000477567 BTBD11A6QL63 1104 aa20.34■□□□□ 0.85
MMP11-208ENST00000477567 SPINK5Q9NQ38 1064 aaPredicted RBP20.34■□□□□ 0.85
MMP11-208ENST00000477567 ZNF831Q5JPB2 1677 aa20.34■□□□□ 0.85
MMP11-208ENST00000477567 TRIM37O94972 964 aa20.33■□□□□ 0.85
MMP11-208ENST00000477567 SLFN5Q08AF3 891 aa20.33■□□□□ 0.85
MMP11-208ENST00000477567 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
MMP11-208ENST00000477567 TRMT2AQ8IZ69 625 aaKnown RBP20.33■□□□□ 0.85
MMP11-208ENST00000477567 RGPD3A6NKT7 1758 aaPredicted RBP20.33■□□□□ 0.84
MMP11-208ENST00000477567 RGPD4Q7Z3J3 1758 aa20.33■□□□□ 0.84
MMP11-208ENST00000477567 E9PSI1 815 aa20.32■□□□□ 0.84
MMP11-208ENST00000477567 YTHDC1Q96MU7 727 aaKnown RBP20.32■□□□□ 0.84
MMP11-208ENST00000477567 ATG3Q9NT62 314 aa20.32■□□□□ 0.84
MMP11-208ENST00000477567 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
MMP11-208ENST00000477567 KCPQ6ZWJ8 1503 aa20.32■□□□□ 0.84
MMP11-208ENST00000477567 SMARCC1Q92922 1105 aaPredicted RBP20.31■□□□□ 0.84
MMP11-208ENST00000477567 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
MMP11-208ENST00000477567 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
MMP11-208ENST00000477567 MIS18AQ9NYP9 233 aa20.31■□□□□ 0.84
MMP11-208ENST00000477567 TSPYL4Q9UJ04 414 aa20.31■□□□□ 0.84
MMP11-208ENST00000477567 CICQ96RK0 1608 aaPredicted RBP20.31■□□□□ 0.84
MMP11-208ENST00000477567 SLC39A6Q13433 755 aa20.3■□□□□ 0.84
MMP11-208ENST00000477567 CDCA7LQ96GN5 454 aa20.3■□□□□ 0.84
MMP11-208ENST00000477567 HEG1Q9ULI3 1381 aa20.3■□□□□ 0.84
MMP11-208ENST00000477567 LAS1LQ9Y4W2 734 aaKnown RBP20.29■□□□□ 0.84
MMP11-208ENST00000477567 FANCIQ9NVI1 1328 aa20.28■□□□□ 0.84
MMP11-208ENST00000477567 KCNQ3O43525 872 aa20.28■□□□□ 0.84
MMP11-208ENST00000477567 EIF4A1P60842 406 aaKnown RBP20.28■□□□□ 0.84
MMP11-208ENST00000477567 CCDC125Q86Z20 511 aa20.28■□□□□ 0.84
MMP11-208ENST00000477567 PALLDQ8WX93 1383 aa20.27■□□□□ 0.84
MMP11-208ENST00000477567 PLSCR1O15162 318 aa20.27■□□□□ 0.84
MMP11-208ENST00000477567 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
MMP11-208ENST00000477567 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
MMP11-208ENST00000477567 TSR2Q969E8 191 aaKnown RBP20.27■□□□□ 0.84
MMP11-208ENST00000477567 TAF1LQ8IZX4 1826 aa20.26■□□□□ 0.83
MMP11-208ENST00000477567 ZNF496Q96IT1 587 aaPredicted RBP20.26■□□□□ 0.83
MMP11-208ENST00000477567 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
MMP11-208ENST00000477567 FMNL2Q96PY5 1086 aa20.25■□□□□ 0.83
MMP11-208ENST00000477567 C5P01031 1676 aa20.25■□□□□ 0.83
MMP11-208ENST00000477567 TJP1Q07157 1748 aa20.24■□□□□ 0.83
MMP11-208ENST00000477567 LAMB4A4D0S4 1761 aa20.24■□□□□ 0.83
MMP11-208ENST00000477567 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
MMP11-208ENST00000477567 APBA3O96018 575 aa20.23■□□□□ 0.83
MMP11-208ENST00000477567 COL5A3P25940 1745 aaPredicted RBP20.23■□□□□ 0.83
MMP11-208ENST00000477567 SLC4A9Q96Q91 983 aa20.23■□□□□ 0.83
MMP11-208ENST00000477567 SOS1Q07889 1333 aaPredicted RBP20.23■□□□□ 0.83
MMP11-208ENST00000477567 LOC102724428A0A0B4J2F2 783 aa20.22■□□□□ 0.83
MMP11-208ENST00000477567 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
MMP11-208ENST00000477567 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
MMP11-208ENST00000477567 SIK1P57059 783 aa20.22■□□□□ 0.83
MMP11-208ENST00000477567 HOXB7P09629 217 aa20.21■□□□□ 0.83
MMP11-208ENST00000477567 SNRPA1P09661 255 aaKnown RBP20.21■□□□□ 0.83
MMP11-208ENST00000477567 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
MMP11-208ENST00000477567 C8orf58Q8NAV2 365 aa20.2■□□□□ 0.82
MMP11-208ENST00000477567 RREB1Q92766 1687 aa20.19■□□□□ 0.82
MMP11-208ENST00000477567 MYH14Q7Z406 1995 aaKnown RBP20.19■□□□□ 0.82
MMP11-208ENST00000477567 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
MMP11-208ENST00000477567 KRT24Q2M2I5 525 aa20.19■□□□□ 0.82
MMP11-208ENST00000477567 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
MMP11-208ENST00000477567 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
MMP11-208ENST00000477567 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
MMP11-208ENST00000477567 PROM2Q8N271 834 aa20.18■□□□□ 0.82
MMP11-208ENST00000477567 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
MMP11-208ENST00000477567 CAMKK2Q96RR4 588 aa20.18■□□□□ 0.82
MMP11-208ENST00000477567 CT47B1P0C2W7 299 aaPredicted RBP20.17■□□□□ 0.82
MMP11-208ENST00000477567 ATP6V1AP38606 617 aa20.17■□□□□ 0.82
MMP11-208ENST00000477567 BAG6P46379 1132 aa20.17■□□□□ 0.82
MMP11-208ENST00000477567 TXNRD1Q16881 649 aa20.17■□□□□ 0.82
MMP11-208ENST00000477567 VAMP4O75379 141 aa20.16■□□□□ 0.82
MMP11-208ENST00000477567 HMGB2P26583 209 aaKnown RBP20.16■□□□□ 0.82
MMP11-208ENST00000477567 ITPK1Q13572 414 aa20.16■□□□□ 0.82
MMP11-208ENST00000477567 TWISTNBQ3B726 338 aaPredicted RBP20.16■□□□□ 0.82
MMP11-208ENST00000477567 CCNL1Q9UK58 526 aaPredicted RBP20.16■□□□□ 0.82
MMP11-208ENST00000477567 PRAMEF22A3QJZ6 481 aa20.15■□□□□ 0.82
MMP11-208ENST00000477567 DNAJC10Q8IXB1 793 aa20.15■□□□□ 0.82
MMP11-208ENST00000477567 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
MMP11-208ENST00000477567 LRRC4BQ9NT99 713 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms