RNA–Protein interactions for RNA: ENST00000477234.1

SBF1-208, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 947 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-208ENST00000477234 TMOD3Q9NYL9 352 aa17.19■□□□□ 0.34
SBF1-208ENST00000477234 PIM2Q9P1W9 311 aa17.19■□□□□ 0.34
SBF1-208ENST00000477234 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
SBF1-208ENST00000477234 INSRP06213 1382 aa17.18■□□□□ 0.34
SBF1-208ENST00000477234 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
SBF1-208ENST00000477234 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
SBF1-208ENST00000477234 ATP6V1AP38606 617 aa17.18■□□□□ 0.34
SBF1-208ENST00000477234 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
SBF1-208ENST00000477234 CYP27B1O15528 508 aa17.17■□□□□ 0.34
SBF1-208ENST00000477234 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
SBF1-208ENST00000477234 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
SBF1-208ENST00000477234 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
SBF1-208ENST00000477234 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
SBF1-208ENST00000477234 FLT4P35916 1363 aa17.16■□□□□ 0.34
SBF1-208ENST00000477234 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
SBF1-208ENST00000477234 AMIGO3Q86WK7 504 aa17.16■□□□□ 0.34
SBF1-208ENST00000477234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.34
SBF1-208ENST00000477234 DPEP1P16444 411 aa17.15■□□□□ 0.34
SBF1-208ENST00000477234 RFC4P35249 363 aa17.15■□□□□ 0.34
SBF1-208ENST00000477234 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
SBF1-208ENST00000477234 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.34
SBF1-208ENST00000477234 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
SBF1-208ENST00000477234 PCNTO95613 3336 aa17.14■□□□□ 0.33
SBF1-208ENST00000477234 RRS1Q15050 365 aaKnown RBP17.14■□□□□ 0.33
SBF1-208ENST00000477234 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
SBF1-208ENST00000477234 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
SBF1-208ENST00000477234 PKD1L3Q7Z443 1732 aa17.13■□□□□ 0.33
SBF1-208ENST00000477234 HSPA1AP0DMV8 641 aaKnown RBP17.13■□□□□ 0.33
SBF1-208ENST00000477234 HSPA1BP0DMV9 641 aaKnown RBP17.13■□□□□ 0.33
SBF1-208ENST00000477234 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
SBF1-208ENST00000477234 HTRA3P83110 453 aa17.13■□□□□ 0.33
SBF1-208ENST00000477234 DCAF5Q96JK2 942 aa17.13■□□□□ 0.33
SBF1-208ENST00000477234 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
SBF1-208ENST00000477234 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
SBF1-208ENST00000477234 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
SBF1-208ENST00000477234 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
SBF1-208ENST00000477234 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
SBF1-208ENST00000477234 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
SBF1-208ENST00000477234 FYB1O15117 783 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 FBLN1P23142 703 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 ITPK1Q13572 414 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 ARHGEF1Q92888 912 aaKnown RBP17.09■□□□□ 0.33
SBF1-208ENST00000477234 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
SBF1-208ENST00000477234 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
SBF1-208ENST00000477234 HSP90AB1P08238 724 aaKnown RBP17.08■□□□□ 0.32
SBF1-208ENST00000477234 GYS1P13807 737 aa17.08■□□□□ 0.32
SBF1-208ENST00000477234 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
SBF1-208ENST00000477234 SBF1O95248 1867 aa17.07■□□□□ 0.32
SBF1-208ENST00000477234 GLTPD2A6NH11 291 aa17.07■□□□□ 0.32
SBF1-208ENST00000477234 SLC34A2O95436 690 aa17.07■□□□□ 0.32
SBF1-208ENST00000477234 TONSLQ96HA7 1378 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 ERVV-2B6SEH9 535 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 KCNA3P22001 575 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 DPY19L2Q6NUT2 758 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 PCDH10Q9P2E7 1040 aa17.06■□□□□ 0.32
SBF1-208ENST00000477234 LMNB1P20700 586 aa17.05■□□□□ 0.32
SBF1-208ENST00000477234 ATG3Q9NT62 314 aa17.05■□□□□ 0.32
SBF1-208ENST00000477234 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
SBF1-208ENST00000477234 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
SBF1-208ENST00000477234 CDCA8Q53HL2 280 aa17.04■□□□□ 0.32
SBF1-208ENST00000477234 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SBF1-208ENST00000477234 PRDM10Q9NQV6 1147 aa17.04■□□□□ 0.32
SBF1-208ENST00000477234 PHKG2P15735 406 aa17.03■□□□□ 0.32
SBF1-208ENST00000477234 KDRP35968 1356 aa17.02■□□□□ 0.32
SBF1-208ENST00000477234 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
SBF1-208ENST00000477234 AIDAQ96BJ3 306 aa17.01■□□□□ 0.31
SBF1-208ENST00000477234 TESK2Q96S53 571 aa17■□□□□ 0.31
SBF1-208ENST00000477234 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
SBF1-208ENST00000477234 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
SBF1-208ENST00000477234 KDM6AO15550 1401 aaPredicted RBP16.99■□□□□ 0.31
SBF1-208ENST00000477234 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
SBF1-208ENST00000477234 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
SBF1-208ENST00000477234 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
SBF1-208ENST00000477234 ZPR1O75312 459 aa16.98■□□□□ 0.31
SBF1-208ENST00000477234 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
SBF1-208ENST00000477234 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
SBF1-208ENST00000477234 CABP4P57796 275 aa16.97■□□□□ 0.31
SBF1-208ENST00000477234 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
SBF1-208ENST00000477234 EYA1Q99502 592 aa16.97■□□□□ 0.31
SBF1-208ENST00000477234 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
SBF1-208ENST00000477234 CHRNA5P30532 468 aa16.95■□□□□ 0.3
SBF1-208ENST00000477234 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
SBF1-208ENST00000477234 FKBP8Q14318 412 aa16.95■□□□□ 0.3
SBF1-208ENST00000477234 AMOTQ4VCS5 1084 aa16.95■□□□□ 0.3
SBF1-208ENST00000477234 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SBF1-208ENST00000477234 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
SBF1-208ENST00000477234 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
SBF1-208ENST00000477234 PLEKHO1Q53GL0 409 aaPredicted RBP16.94■□□□□ 0.3
SBF1-208ENST00000477234 CHADLQ6NUI6 762 aa16.94■□□□□ 0.3
SBF1-208ENST00000477234 TM4SF1P30408 202 aa16.93■□□□□ 0.3
SBF1-208ENST00000477234 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
SBF1-208ENST00000477234 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
SBF1-208ENST00000477234 CCDC88AQ3V6T2 1871 aa16.93■□□□□ 0.3
SBF1-208ENST00000477234 DDR1Q08345 913 aa16.92■□□□□ 0.3
SBF1-208ENST00000477234 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
SBF1-208ENST00000477234 IQCA1LA6NCM1 817 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms