RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 ADAMTS7Q9UKP4 1686 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 AKAP4Q5JQC9 854 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 SLC4A9Q96Q91 983 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 ATG3Q9NT62 314 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
APTX-220ENST00000476858 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
APTX-220ENST00000476858 RNMTO43148 476 aaKnown RBP16.65■□□□□ 0.26
APTX-220ENST00000476858 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
APTX-220ENST00000476858 NUDCQ9Y266 331 aa16.65■□□□□ 0.26
APTX-220ENST00000476858 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
APTX-220ENST00000476858 IL17REQ8NFR9 667 aa16.64■□□□□ 0.25
APTX-220ENST00000476858 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
APTX-220ENST00000476858 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
APTX-220ENST00000476858 ERVV-2B6SEH9 535 aa16.63■□□□□ 0.25
APTX-220ENST00000476858 CABP4P57796 275 aa16.63■□□□□ 0.25
APTX-220ENST00000476858 ITPK1Q13572 414 aa16.63■□□□□ 0.25
APTX-220ENST00000476858 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
APTX-220ENST00000476858 MRC1P22897 1456 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 FCHSD2O94868 740 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 AKT1S1Q96B36 256 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
APTX-220ENST00000476858 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
APTX-220ENST00000476858 SLC39A6Q13433 755 aa16.61■□□□□ 0.25
APTX-220ENST00000476858 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
APTX-220ENST00000476858 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
APTX-220ENST00000476858 C5P01031 1676 aa16.61■□□□□ 0.25
APTX-220ENST00000476858 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
APTX-220ENST00000476858 CCDC146Q8IYE0 955 aa16.6■□□□□ 0.25
APTX-220ENST00000476858 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
APTX-220ENST00000476858 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
APTX-220ENST00000476858 LOC102724428A0A0B4J2F2 783 aa16.59■□□□□ 0.25
APTX-220ENST00000476858 SIK1P57059 783 aa16.59■□□□□ 0.25
APTX-220ENST00000476858 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
APTX-220ENST00000476858 MCM10Q7L590 875 aa16.59■□□□□ 0.25
APTX-220ENST00000476858 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
APTX-220ENST00000476858 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
APTX-220ENST00000476858 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
APTX-220ENST00000476858 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
APTX-220ENST00000476858 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
APTX-220ENST00000476858 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 C4BP0C0L5 1744 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 KCPQ6ZWJ8 1503 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 KCNQ3O43525 872 aa16.57■□□□□ 0.24
APTX-220ENST00000476858 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
APTX-220ENST00000476858 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
APTX-220ENST00000476858 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
APTX-220ENST00000476858 THUMPD2Q9BTF0 503 aaKnown RBP16.57■□□□□ 0.24
APTX-220ENST00000476858 TJP1Q07157 1748 aa16.56■□□□□ 0.24
APTX-220ENST00000476858 CEMIPQ8WUJ3 1361 aa16.56■□□□□ 0.24
APTX-220ENST00000476858 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
APTX-220ENST00000476858 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
APTX-220ENST00000476858 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
APTX-220ENST00000476858 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
APTX-220ENST00000476858 NFE2L2Q16236 605 aa16.53■□□□□ 0.24
APTX-220ENST00000476858 COL23A1Q86Y22 540 aaPredicted RBP16.53■□□□□ 0.24
APTX-220ENST00000476858 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
APTX-220ENST00000476858 LRP5O75197 1615 aa16.52■□□□□ 0.24
APTX-220ENST00000476858 UBR2Q8IWV8 1755 aa16.52■□□□□ 0.24
APTX-220ENST00000476858 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.24
APTX-220ENST00000476858 TFCP2L1Q9NZI6 479 aa16.52■□□□□ 0.24
APTX-220ENST00000476858 QSER1Q2KHR3 1735 aa16.51■□□□□ 0.23
APTX-220ENST00000476858 UBR3Q6ZT12 1888 aa16.51■□□□□ 0.23
APTX-220ENST00000476858 ANP32CO43423 234 aa16.51■□□□□ 0.23
APTX-220ENST00000476858 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
APTX-220ENST00000476858 ZNF831Q5JPB2 1677 aa16.5■□□□□ 0.23
APTX-220ENST00000476858 MYH14Q7Z406 1995 aaKnown RBP16.5■□□□□ 0.23
APTX-220ENST00000476858 PHF14O94880 888 aa16.5■□□□□ 0.23
APTX-220ENST00000476858 PTGER2P43116 358 aa16.5■□□□□ 0.23
APTX-220ENST00000476858 TEFQ10587 303 aa16.5■□□□□ 0.23
APTX-220ENST00000476858 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
APTX-220ENST00000476858 ZNF496Q96IT1 587 aaPredicted RBP16.5■□□□□ 0.23
APTX-220ENST00000476858 PRAMEF22A3QJZ6 481 aa16.49■□□□□ 0.23
APTX-220ENST00000476858 TMPOP42166 694 aaKnown RBP16.49■□□□□ 0.23
APTX-220ENST00000476858 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
APTX-220ENST00000476858 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
APTX-220ENST00000476858 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
APTX-220ENST00000476858 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
APTX-220ENST00000476858 PNISRQ8TF01 805 aaKnown RBP16.48■□□□□ 0.23
APTX-220ENST00000476858 GNPATO15228 680 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 RIPK4P57078 832 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
APTX-220ENST00000476858 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 RUNDC1Q96C34 613 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 AK7Q96M32 723 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
APTX-220ENST00000476858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
APTX-220ENST00000476858 BTBD11A6QL63 1104 aa16.46■□□□□ 0.23
APTX-220ENST00000476858 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
APTX-220ENST00000476858 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
APTX-220ENST00000476858 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms