RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
ABCF3-211ENST00000475728 PAPPAQ13219 1627 aa19.16■□□□□ 0.66
ABCF3-211ENST00000475728 ANP32CO43423 234 aa19.16■□□□□ 0.66
ABCF3-211ENST00000475728 RTF1Q92541 710 aaKnown RBP19.16■□□□□ 0.66
ABCF3-211ENST00000475728 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
ABCF3-211ENST00000475728 HTATSF1O43719 755 aaKnown RBP19.15■□□□□ 0.66
ABCF3-211ENST00000475728 TEFQ10587 303 aa19.15■□□□□ 0.66
ABCF3-211ENST00000475728 AKT1S1Q96B36 256 aa19.15■□□□□ 0.66
ABCF3-211ENST00000475728 KCNQ4P56696 695 aa19.14■□□□□ 0.65
ABCF3-211ENST00000475728 TFCP2L1Q9NZI6 479 aa19.14■□□□□ 0.65
ABCF3-211ENST00000475728 MRC1P22897 1456 aa19.14■□□□□ 0.65
ABCF3-211ENST00000475728 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
ABCF3-211ENST00000475728 DCAF8L1A6NGE4 600 aa19.13■□□□□ 0.65
ABCF3-211ENST00000475728 ATP6V1AP38606 617 aa19.13■□□□□ 0.65
ABCF3-211ENST00000475728 ZNF827Q17R98 1081 aa19.13■□□□□ 0.65
ABCF3-211ENST00000475728 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
ABCF3-211ENST00000475728 ADAMTS7Q9UKP4 1686 aa19.12■□□□□ 0.65
ABCF3-211ENST00000475728 IL17REQ8NFR9 667 aa19.12■□□□□ 0.65
ABCF3-211ENST00000475728 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
ABCF3-211ENST00000475728 CEMIPQ8WUJ3 1361 aa19.11■□□□□ 0.65
ABCF3-211ENST00000475728 SENP3-EIF4A1A0A087X0R7 540 aa19.11■□□□□ 0.65
ABCF3-211ENST00000475728 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
ABCF3-211ENST00000475728 AK7Q96M32 723 aa19.11■□□□□ 0.65
ABCF3-211ENST00000475728 SPON1Q9HCB6 807 aa19.11■□□□□ 0.65
ABCF3-211ENST00000475728 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
ABCF3-211ENST00000475728 PTCD1O75127 700 aaKnown RBP19.09■□□□□ 0.65
ABCF3-211ENST00000475728 TTC5Q8N0Z6 440 aa19.09■□□□□ 0.65
ABCF3-211ENST00000475728 SLC16A10Q8TF71 515 aa19.09■□□□□ 0.65
ABCF3-211ENST00000475728 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
ABCF3-211ENST00000475728 C5P01031 1676 aa19.08■□□□□ 0.64
ABCF3-211ENST00000475728 ITPK1Q13572 414 aa19.07■□□□□ 0.64
ABCF3-211ENST00000475728 IFFO2Q5TF58 517 aa19.07■□□□□ 0.64
ABCF3-211ENST00000475728 LINC00116Q8NCU8 138 aa19.07■□□□□ 0.64
ABCF3-211ENST00000475728 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
ABCF3-211ENST00000475728 ZNF831Q5JPB2 1677 aa19.07■□□□□ 0.64
ABCF3-211ENST00000475728 PNPLA7Q6ZV29 1317 aa19.06■□□□□ 0.64
ABCF3-211ENST00000475728 LMOD3Q0VAK6 560 aa19.06■□□□□ 0.64
ABCF3-211ENST00000475728 RC3H1Q5TC82 1133 aaKnown RBP19.06■□□□□ 0.64
ABCF3-211ENST00000475728 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
ABCF3-211ENST00000475728 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 MCM10Q7L590 875 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 VSIG10Q8N0Z9 540 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 SLC4A9Q96Q91 983 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 ADAMTS8Q9UP79 889 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 CASZ1Q86V15 1759 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 C4BP0C0L5 1744 aa19.05■□□□□ 0.64
ABCF3-211ENST00000475728 CNTNAP4Q9C0A0 1308 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 MSH5O43196 834 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 ZBTB7AO95365 584 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 SSFA2P28290 1259 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 QSER1Q2KHR3 1735 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
ABCF3-211ENST00000475728 PDGFDQ9GZP0 370 aaPredicted RBP19.04■□□□□ 0.64
ABCF3-211ENST00000475728 TAF1LQ8IZX4 1826 aa19.03■□□□□ 0.64
ABCF3-211ENST00000475728 GNPATO15228 680 aa19.03■□□□□ 0.64
ABCF3-211ENST00000475728 PNISRQ8TF01 805 aaKnown RBP19.03■□□□□ 0.64
ABCF3-211ENST00000475728 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
ABCF3-211ENST00000475728 RIPK4P57078 832 aa19.02■□□□□ 0.64
ABCF3-211ENST00000475728 TAF7Q15545 349 aaPredicted RBP19.02■□□□□ 0.64
ABCF3-211ENST00000475728 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.64
ABCF3-211ENST00000475728 RTCBQ9Y3I0 505 aaKnown RBP19.02■□□□□ 0.64
ABCF3-211ENST00000475728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.01■□□□□ 0.63
ABCF3-211ENST00000475728 ADRA2BP18089 450 aa19.01■□□□□ 0.63
ABCF3-211ENST00000475728 DCTN1Q14203 1278 aa19.01■□□□□ 0.63
ABCF3-211ENST00000475728 COL23A1Q86Y22 540 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-211ENST00000475728 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
ABCF3-211ENST00000475728 FMNL2Q96PY5 1086 aa19.01■□□□□ 0.63
ABCF3-211ENST00000475728 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
ABCF3-211ENST00000475728 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
ABCF3-211ENST00000475728 VIRMAQ69YN4 1812 aaKnown RBP19■□□□□ 0.63
ABCF3-211ENST00000475728 CICQ96RK0 1608 aaPredicted RBP19■□□□□ 0.63
ABCF3-211ENST00000475728 KCPQ6ZWJ8 1503 aa19■□□□□ 0.63
ABCF3-211ENST00000475728 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
ABCF3-211ENST00000475728 PHF14O94880 888 aa18.99■□□□□ 0.63
ABCF3-211ENST00000475728 STARD3NLO95772 234 aa18.99■□□□□ 0.63
ABCF3-211ENST00000475728 POLD1P28340 1107 aa18.99■□□□□ 0.63
ABCF3-211ENST00000475728 CRKLP46109 303 aaKnown RBP18.99■□□□□ 0.63
ABCF3-211ENST00000475728 DNAJC10Q8IXB1 793 aa18.99■□□□□ 0.63
ABCF3-211ENST00000475728 HEG1Q9ULI3 1381 aa18.98■□□□□ 0.63
ABCF3-211ENST00000475728 C1QTNF8P60827 252 aa18.98■□□□□ 0.63
ABCF3-211ENST00000475728 TRAPPC3LQ5T215 181 aa18.98■□□□□ 0.63
ABCF3-211ENST00000475728 ZNF496Q96IT1 587 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-211ENST00000475728 SIPA1L3O60292 1781 aaPredicted RBP18.98■□□□□ 0.63
ABCF3-211ENST00000475728 PTGER2P43116 358 aa18.97■□□□□ 0.63
ABCF3-211ENST00000475728 CCDC87Q9NVE4 849 aa18.97■□□□□ 0.63
ABCF3-211ENST00000475728 TUBGCP6Q96RT7 1819 aa18.96■□□□□ 0.63
ABCF3-211ENST00000475728 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
ABCF3-211ENST00000475728 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
ABCF3-211ENST00000475728 COL5A3P25940 1745 aaPredicted RBP18.95■□□□□ 0.62
ABCF3-211ENST00000475728 NEUROD2Q15784 382 aa18.95■□□□□ 0.62
ABCF3-211ENST00000475728 CCDC184Q52MB2 194 aa18.95■□□□□ 0.62
ABCF3-211ENST00000475728 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
ABCF3-211ENST00000475728 TJP1Q07157 1748 aa18.94■□□□□ 0.62
ABCF3-211ENST00000475728 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
ABCF3-211ENST00000475728 RFC4P35249 363 aa18.94■□□□□ 0.62
ABCF3-211ENST00000475728 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
ABCF3-211ENST00000475728 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
ABCF3-211ENST00000475728 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
ABCF3-211ENST00000475728 UBR3Q6ZT12 1888 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms