RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 SNX21Q969T3 373 aa15.97■□□□□ 0.15
CCNL1-216ENST00000475298 SBNO1A3KN83 1393 aa15.96■□□□□ 0.15
CCNL1-216ENST00000475298 FER1L4A9Z1Z3 1794 aa15.96■□□□□ 0.15
CCNL1-216ENST00000475298 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
CCNL1-216ENST00000475298 RBM25P49756 843 aaKnown RBP15.96■□□□□ 0.15
CCNL1-216ENST00000475298 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
CCNL1-216ENST00000475298 KIAA0232Q92628 1395 aa15.96■□□□□ 0.15
CCNL1-216ENST00000475298 ATP10DQ9P241 1426 aa15.96■□□□□ 0.14
CCNL1-216ENST00000475298 NLRP6P59044 892 aa15.95■□□□□ 0.14
CCNL1-216ENST00000475298 G2E3Q7L622 706 aa15.95■□□□□ 0.14
CCNL1-216ENST00000475298 MEIS3Q99687 375 aa15.95■□□□□ 0.14
CCNL1-216ENST00000475298 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
CCNL1-216ENST00000475298 APBB1O00213 710 aa15.95■□□□□ 0.14
CCNL1-216ENST00000475298 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
CCNL1-216ENST00000475298 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
CCNL1-216ENST00000475298 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
CCNL1-216ENST00000475298 PPP4R3BQ5MIZ7 849 aa15.94■□□□□ 0.14
CCNL1-216ENST00000475298 F6X3S4 739 aa15.94■□□□□ 0.14
CCNL1-216ENST00000475298 KLHL40Q2TBA0 621 aa15.94■□□□□ 0.14
CCNL1-216ENST00000475298 SASS6Q6UVJ0 657 aa15.94■□□□□ 0.14
CCNL1-216ENST00000475298 OTUD7AQ8TE49 926 aaPredicted RBP15.94■□□□□ 0.14
CCNL1-216ENST00000475298 RBM33Q96EV2 1170 aaKnown RBP15.94■□□□□ 0.14
CCNL1-216ENST00000475298 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
CCNL1-216ENST00000475298 KIF24Q5T7B8 1368 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 CEP85Q6P2H3 762 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 PLEKHM2Q8IWE5 1019 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 LTV1Q96GA3 475 aaPredicted RBP15.93■□□□□ 0.14
CCNL1-216ENST00000475298 ZKSCAN5Q9Y2L8 839 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 IGSF1Q8N6C5 1336 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 KDRP35968 1356 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 SMARCA5O60264 1052 aaPredicted RBP15.93■□□□□ 0.14
CCNL1-216ENST00000475298 ZNF445P59923 1031 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 ANKRD44Q8N8A2 993 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 KIF2CQ99661 725 aa15.93■□□□□ 0.14
CCNL1-216ENST00000475298 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
CCNL1-216ENST00000475298 CSPP1Q1MSJ5 1256 aa15.92■□□□□ 0.14
CCNL1-216ENST00000475298 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
CCNL1-216ENST00000475298 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
CCNL1-216ENST00000475298 PTPRCP08575 1304 aa15.92■□□□□ 0.14
CCNL1-216ENST00000475298 XRN1Q8IZH2 1706 aaKnown RBP15.92■□□□□ 0.14
CCNL1-216ENST00000475298 CD2BP2O95400 341 aaKnown RBP15.91■□□□□ 0.14
CCNL1-216ENST00000475298 NECTIN2Q92692 538 aa15.91■□□□□ 0.14
CCNL1-216ENST00000475298 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
CCNL1-216ENST00000475298 HOXC9P31274 260 aa15.91■□□□□ 0.14
CCNL1-216ENST00000475298 CLEC17AQ6ZS10 378 aa15.91■□□□□ 0.14
CCNL1-216ENST00000475298 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
CCNL1-216ENST00000475298 SSFA2P28290 1259 aa15.9■□□□□ 0.14
CCNL1-216ENST00000475298 C14orf37Q86TY3 774 aa15.9■□□□□ 0.14
CCNL1-216ENST00000475298 GTPBP4Q9BZE4 634 aaKnown RBP15.9■□□□□ 0.14
CCNL1-216ENST00000475298 KIF20AO95235 890 aa15.9■□□□□ 0.14
CCNL1-216ENST00000475298 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
CCNL1-216ENST00000475298 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
CCNL1-216ENST00000475298 DDX49Q9Y6V7 483 aaKnown RBP15.9■□□□□ 0.14
CCNL1-216ENST00000475298 MARF1Q9Y4F3 1742 aaKnown RBP15.9■□□□□ 0.14
CCNL1-216ENST00000475298 CDC45O75419 566 aa15.89■□□□□ 0.13
CCNL1-216ENST00000475298 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
CCNL1-216ENST00000475298 NCLP19338 710 aaKnown RBP15.89■□□□□ 0.13
CCNL1-216ENST00000475298 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
CCNL1-216ENST00000475298 MCM5P33992 734 aa15.89■□□□□ 0.13
CCNL1-216ENST00000475298 TTC22Q5TAA0 569 aa15.89■□□□□ 0.13
CCNL1-216ENST00000475298 RPAP2Q8IXW5 612 aaPredicted RBP15.89■□□□□ 0.13
CCNL1-216ENST00000475298 JARID2Q92833 1246 aaPredicted RBP15.89■□□□□ 0.13
CCNL1-216ENST00000475298 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
CCNL1-216ENST00000475298 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
CCNL1-216ENST00000475298 PDIA4P13667 645 aaKnown RBP15.88■□□□□ 0.13
CCNL1-216ENST00000475298 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
CCNL1-216ENST00000475298 TMEM51Q9NW97 253 aa15.88■□□□□ 0.13
CCNL1-216ENST00000475298 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
CCNL1-216ENST00000475298 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
CCNL1-216ENST00000475298 ZSCAN23Q3MJ62 389 aa15.86■□□□□ 0.13
CCNL1-216ENST00000475298 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
CCNL1-216ENST00000475298 CBX1P83916 185 aa15.86■□□□□ 0.13
CCNL1-216ENST00000475298 IL17REQ8NFR9 667 aa15.86■□□□□ 0.13
CCNL1-216ENST00000475298 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
CCNL1-216ENST00000475298 AK9Q5TCS8 1911 aa15.85■□□□□ 0.13
CCNL1-216ENST00000475298 MYRIPQ8NFW9 859 aa15.85■□□□□ 0.13
CCNL1-216ENST00000475298 LETM1O95202 739 aaPredicted RBP15.85■□□□□ 0.13
CCNL1-216ENST00000475298 GOLGA6L22H0YM25 854 aa15.84■□□□□ 0.13
CCNL1-216ENST00000475298 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
CCNL1-216ENST00000475298 ATP2B3Q16720 1220 aa15.84■□□□□ 0.13
CCNL1-216ENST00000475298 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
CCNL1-216ENST00000475298 SETD1BQ9UPS6 1966 aaKnown RBP15.84■□□□□ 0.13
CCNL1-216ENST00000475298 SDSP20132 328 aa15.84■□□□□ 0.13
CCNL1-216ENST00000475298 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
CCNL1-216ENST00000475298 TSC1Q92574 1164 aa15.84■□□□□ 0.13
CCNL1-216ENST00000475298 LRRC37A3O60309 1634 aa15.83■□□□□ 0.13
CCNL1-216ENST00000475298 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
CCNL1-216ENST00000475298 FLIIQ13045 1269 aa15.83■□□□□ 0.12
CCNL1-216ENST00000475298 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
CCNL1-216ENST00000475298 FBXO41Q8TF61 875 aa15.83■□□□□ 0.12
CCNL1-216ENST00000475298 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
CCNL1-216ENST00000475298 CCT4P50991 539 aaKnown RBP15.82■□□□□ 0.12
CCNL1-216ENST00000475298 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
CCNL1-216ENST00000475298 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
CCNL1-216ENST00000475298 TSHZ3Q63HK5 1081 aa15.82■□□□□ 0.12
CCNL1-216ENST00000475298 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
CCNL1-216ENST00000475298 K7ELQ4 463 aaPredicted RBP15.81■□□□□ 0.12
CCNL1-216ENST00000475298 CCDC39Q9UFE4 941 aa15.81■□□□□ 0.12
CCNL1-216ENST00000475298 HTATSF1O43719 755 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms