RNA–Protein interactions for RNA: ENST00000475087.5

COCH-205, Transcript of cochlin, humanhuman

TSL 1 (best) BASIC

Gene COCH, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-205ENST00000475087 MRC1P22897 1456 aa27.46■■□□□ 1.99
COCH-205ENST00000475087 RXRBP28702 533 aa27.44■■□□□ 1.98
COCH-205ENST00000475087 POTEAQ6S8J7 498 aa27.43■■□□□ 1.98
COCH-205ENST00000475087 NFATC2IPQ8NCF5 419 aa27.43■■□□□ 1.98
COCH-205ENST00000475087 MIS18AQ9NYP9 233 aa27.43■■□□□ 1.98
COCH-205ENST00000475087 CABP4P57796 275 aa27.42■■□□□ 1.98
COCH-205ENST00000475087 TSPYL4Q9UJ04 414 aa27.42■■□□□ 1.98
COCH-205ENST00000475087 SIPA1L3O60292 1781 aaPredicted RBP27.42■■□□□ 1.98
COCH-205ENST00000475087 TOGARAM1Q9Y4F4 1720 aa27.41■■□□□ 1.98
COCH-205ENST00000475087 BTBD11A6QL63 1104 aa27.4■■□□□ 1.98
COCH-205ENST00000475087 EXOSC9Q06265 439 aaKnown RBP27.37■■□□□ 1.97
COCH-205ENST00000475087 TMOD3Q9NYL9 352 aa27.35■■□□□ 1.97
COCH-205ENST00000475087 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
COCH-205ENST00000475087 BCL9O00512 1426 aa27.34■■□□□ 1.97
COCH-205ENST00000475087 PRIM1P49642 420 aaKnown RBP27.33■■□□□ 1.97
COCH-205ENST00000475087 KRT27Q7Z3Y8 459 aa27.33■■□□□ 1.97
COCH-205ENST00000475087 DOT1LQ8TEK3 1739 aa27.33■■□□□ 1.97
COCH-205ENST00000475087 KCNQ3O43525 872 aa27.33■■□□□ 1.97
COCH-205ENST00000475087 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
COCH-205ENST00000475087 PIGBQ92521 554 aa27.32■■□□□ 1.96
COCH-205ENST00000475087 ITGB4P16144 1822 aa27.32■■□□□ 1.96
COCH-205ENST00000475087 BRWD3Q6RI45 1802 aa27.32■■□□□ 1.96
COCH-205ENST00000475087 FAM182BQ5T319 152 aa27.31■■□□□ 1.96
COCH-205ENST00000475087 C8orf58Q8NAV2 365 aa27.31■■□□□ 1.96
COCH-205ENST00000475087 RGS12O14924 1447 aa27.31■■□□□ 1.96
COCH-205ENST00000475087 CT47B1P0C2W7 299 aaPredicted RBP27.31■■□□□ 1.96
COCH-205ENST00000475087 EIF4A1P60842 406 aaKnown RBP27.31■■□□□ 1.96
COCH-205ENST00000475087 SLC39A6Q13433 755 aa27.31■■□□□ 1.96
COCH-205ENST00000475087 ACSBG1Q96GR2 724 aa27.31■■□□□ 1.96
COCH-205ENST00000475087 SYTL4Q96C24 671 aaPredicted RBP27.3■■□□□ 1.96
COCH-205ENST00000475087 KRT24Q2M2I5 525 aa27.29■■□□□ 1.96
COCH-205ENST00000475087 TSPYL6Q8N831 410 aa27.29■■□□□ 1.96
COCH-205ENST00000475087 TWISTNBQ3B726 338 aaPredicted RBP27.28■■□□□ 1.96
COCH-205ENST00000475087 TTC5Q8N0Z6 440 aa27.28■■□□□ 1.96
COCH-205ENST00000475087 ELL2O00472 640 aaPredicted RBP27.27■■□□□ 1.96
COCH-205ENST00000475087 RCAN3Q9UKA8 241 aa27.27■■□□□ 1.96
COCH-205ENST00000475087 KCNQ2O43526 872 aa27.26■■□□□ 1.95
COCH-205ENST00000475087 VAMP4O75379 141 aa27.26■■□□□ 1.95
COCH-205ENST00000475087 HEG1Q9ULI3 1381 aa27.26■■□□□ 1.95
COCH-205ENST00000475087 PAPPAQ13219 1627 aa27.26■■□□□ 1.95
COCH-205ENST00000475087 FAM196AQ6ZSG2 479 aa27.25■■□□□ 1.95
COCH-205ENST00000475087 ATG3Q9NT62 314 aa27.24■■□□□ 1.95
COCH-205ENST00000475087 ASAP1Q9ULH1 1129 aa27.24■■□□□ 1.95
COCH-205ENST00000475087 ZNF496Q96IT1 587 aaPredicted RBP27.24■■□□□ 1.95
COCH-205ENST00000475087 SOS1Q07889 1333 aaPredicted RBP27.23■■□□□ 1.95
COCH-205ENST00000475087 KAT6BQ8WYB5 2073 aa27.23■■□□□ 1.95
COCH-205ENST00000475087 ZNF428Q96B54 188 aa27.23■■□□□ 1.95
COCH-205ENST00000475087 FMNL2Q96PY5 1086 aa27.22■■□□□ 1.95
COCH-205ENST00000475087 NHSQ6T4R5 1651 aa27.21■■□□□ 1.95
COCH-205ENST00000475087 UBR2Q8IWV8 1755 aa27.21■■□□□ 1.95
COCH-205ENST00000475087 GIGYF1O75420 1035 aaPredicted RBP27.2■■□□□ 1.95
COCH-205ENST00000475087 HOXB7P09629 217 aa27.2■■□□□ 1.95
COCH-205ENST00000475087 RARSP54136 660 aaKnown RBP27.2■■□□□ 1.95
COCH-205ENST00000475087 KCPQ6ZWJ8 1503 aa27.2■■□□□ 1.95
COCH-205ENST00000475087 SBF2Q86WG5 1849 aa27.19■■□□□ 1.94
COCH-205ENST00000475087 PTF1AQ7RTS3 328 aa27.19■■□□□ 1.94
COCH-205ENST00000475087 PTCD1O75127 700 aaKnown RBP27.17■■□□□ 1.94
COCH-205ENST00000475087 SNRPA1P09661 255 aaKnown RBP27.17■■□□□ 1.94
COCH-205ENST00000475087 ALDH1L2Q3SY69 923 aa27.17■■□□□ 1.94
COCH-205ENST00000475087 BCL11BQ9C0K0 894 aaPredicted RBP27.17■■□□□ 1.94
COCH-205ENST00000475087 SSH1Q8WYL5 1049 aa27.15■■□□□ 1.94
COCH-205ENST00000475087 SMARCC1Q92922 1105 aaPredicted RBP27.15■■□□□ 1.94
COCH-205ENST00000475087 SUPT16HQ9Y5B9 1047 aaKnown RBP27.15■■□□□ 1.94
COCH-205ENST00000475087 PRAMEF22A3QJZ6 481 aa27.15■■□□□ 1.94
COCH-205ENST00000475087 BCAR3O75815 825 aa27.14■■□□□ 1.94
COCH-205ENST00000475087 VSIG10Q8N0Z9 540 aa27.14■■□□□ 1.94
COCH-205ENST00000475087 CHMP4AQ9BY43 222 aa27.13■■□□□ 1.93
COCH-205ENST00000475087 RBM42Q9BTD8 480 aaKnown RBP27.13■■□□□ 1.93
COCH-205ENST00000475087 HDGFL1Q5TGJ6 251 aa27.12■■□□□ 1.93
COCH-205ENST00000475087 CCDC30Q5VVM6 783 aa27.12■■□□□ 1.93
COCH-205ENST00000475087 BCL2L13Q9BXK5 485 aa27.12■■□□□ 1.93
COCH-205ENST00000475087 BTAF1O14981 1849 aa27.12■■□□□ 1.93
COCH-205ENST00000475087 PALLDQ8WX93 1383 aa27.12■■□□□ 1.93
COCH-205ENST00000475087 SMC4Q9NTJ3 1288 aa27.11■■□□□ 1.93
COCH-205ENST00000475087 TRIM37O94972 964 aa27.11■■□□□ 1.93
COCH-205ENST00000475087 EIF2S2P20042 333 aaKnown RBP27.11■■□□□ 1.93
COCH-205ENST00000475087 C5P01031 1676 aa27.11■■□□□ 1.93
COCH-205ENST00000475087 RNF123Q5XPI4 1314 aa27.1■■□□□ 1.93
COCH-205ENST00000475087 TCERG1O14776 1098 aaKnown RBP27.1■■□□□ 1.93
COCH-205ENST00000475087 BRPF1P55201 1214 aaPredicted RBP27.1■■□□□ 1.93
COCH-205ENST00000475087 SLC4A9Q96Q91 983 aa27.1■■□□□ 1.93
COCH-205ENST00000475087 USP16Q9Y5T5 823 aa27.1■■□□□ 1.93
COCH-205ENST00000475087 NECTIN2Q92692 538 aa27.09■■□□□ 1.93
COCH-205ENST00000475087 MRPL50Q8N5N7 158 aaKnown RBP27.08■■□□□ 1.93
COCH-205ENST00000475087 TEX13AQ9BXU3 409 aaPredicted RBP27.08■■□□□ 1.93
COCH-205ENST00000475087 LOC102724428A0A0B4J2F2 783 aa27.08■■□□□ 1.92
COCH-205ENST00000475087 SIK1P57059 783 aa27.08■■□□□ 1.92
COCH-205ENST00000475087 STK31Q9BXU1 1019 aa27.07■■□□□ 1.92
COCH-205ENST00000475087 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
COCH-205ENST00000475087 RRP1P56182 461 aaKnown RBP27.06■■□□□ 1.92
COCH-205ENST00000475087 EP400Q96L91 3159 aa27.05■■□□□ 1.92
COCH-205ENST00000475087 DNAJC10Q8IXB1 793 aa27.05■■□□□ 1.92
COCH-205ENST00000475087 LAMB4A4D0S4 1761 aa27.04■■□□□ 1.92
COCH-205ENST00000475087 ATP6V1AP38606 617 aa27.04■■□□□ 1.92
COCH-205ENST00000475087 CHPF2Q9P2E5 772 aa27.04■■□□□ 1.92
COCH-205ENST00000475087 DBF4Q9UBU7 674 aaPredicted RBP27.04■■□□□ 1.92
COCH-205ENST00000475087 KIF16BQ96L93 1317 aa27.03■■□□□ 1.92
COCH-205ENST00000475087 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.02■■□□□ 1.92
COCH-205ENST00000475087 ZNF831Q5JPB2 1677 aa27.02■■□□□ 1.92
COCH-205ENST00000475087 CICQ96RK0 1608 aaPredicted RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms