RNA–Protein interactions for RNA: ENST00000475036.1

PSMD6-205, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 1,045 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-205ENST00000475036 NEFMP07197 916 aa23.3■■□□□ 1.32
PSMD6-205ENST00000475036 ATP6V1AP38606 617 aa23.3■■□□□ 1.32
PSMD6-205ENST00000475036 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
PSMD6-205ENST00000475036 TFCP2L1Q9NZI6 479 aa23.3■■□□□ 1.32
PSMD6-205ENST00000475036 PTCD1O75127 700 aaKnown RBP23.29■■□□□ 1.32
PSMD6-205ENST00000475036 ITPK1Q13572 414 aa23.29■■□□□ 1.32
PSMD6-205ENST00000475036 SCN11AQ9UI33 1791 aa23.29■■□□□ 1.32
PSMD6-205ENST00000475036 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
PSMD6-205ENST00000475036 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
PSMD6-205ENST00000475036 WDR43Q15061 677 aaKnown RBP eCLIP23.28■■□□□ 1.32
PSMD6-205ENST00000475036 LINC00116Q8NCU8 138 aa23.28■■□□□ 1.32
PSMD6-205ENST00000475036 SLC4A9Q96Q91 983 aa23.28■■□□□ 1.32
PSMD6-205ENST00000475036 MRC1P22897 1456 aa23.28■■□□□ 1.32
PSMD6-205ENST00000475036 ANP32CO43423 234 aa23.27■■□□□ 1.32
PSMD6-205ENST00000475036 TEFQ10587 303 aa23.27■■□□□ 1.32
PSMD6-205ENST00000475036 MCM10Q7L590 875 aa23.27■■□□□ 1.32
PSMD6-205ENST00000475036 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
PSMD6-205ENST00000475036 DCTN1Q14203 1278 aa23.26■■□□□ 1.31
PSMD6-205ENST00000475036 RTF1Q92541 710 aaKnown RBP23.26■■□□□ 1.31
PSMD6-205ENST00000475036 PNNQ9H307 717 aaKnown RBP23.26■■□□□ 1.31
PSMD6-205ENST00000475036 PNPLA7Q6ZV29 1317 aa23.26■■□□□ 1.31
PSMD6-205ENST00000475036 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
PSMD6-205ENST00000475036 CCDC146Q8IYE0 955 aa23.25■■□□□ 1.31
PSMD6-205ENST00000475036 AK7Q96M32 723 aa23.25■■□□□ 1.31
PSMD6-205ENST00000475036 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
PSMD6-205ENST00000475036 SMIM5Q71RC9 77 aa23.24■■□□□ 1.31
PSMD6-205ENST00000475036 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
PSMD6-205ENST00000475036 C5P01031 1676 aa23.24■■□□□ 1.31
PSMD6-205ENST00000475036 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 MSH5O43196 834 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 NFE2L2Q16236 605 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 SPON1Q9HCB6 807 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 ADAMTS8Q9UP79 889 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 CEMIPQ8WUJ3 1361 aa23.23■■□□□ 1.31
PSMD6-205ENST00000475036 PHF14O94880 888 aa23.21■■□□□ 1.31
PSMD6-205ENST00000475036 AMIGO3Q86WK7 504 aa23.21■■□□□ 1.31
PSMD6-205ENST00000475036 C4BP0C0L5 1744 aa23.21■■□□□ 1.31
PSMD6-205ENST00000475036 COL23A1Q86Y22 540 aaPredicted RBP23.2■■□□□ 1.3
PSMD6-205ENST00000475036 LRP5O75197 1615 aa23.19■■□□□ 1.3
PSMD6-205ENST00000475036 GNPATO15228 680 aa23.19■■□□□ 1.3
PSMD6-205ENST00000475036 HTATSF1O43719 755 aaKnown RBP23.19■■□□□ 1.3
PSMD6-205ENST00000475036 HMGB2P26583 209 aaKnown RBP23.19■■□□□ 1.3
PSMD6-205ENST00000475036 TTC5Q8N0Z6 440 aa23.19■■□□□ 1.3
PSMD6-205ENST00000475036 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
PSMD6-205ENST00000475036 BTBD11A6QL63 1104 aa23.18■■□□□ 1.3
PSMD6-205ENST00000475036 THUMPD2Q9BTF0 503 aaKnown RBP23.18■■□□□ 1.3
PSMD6-205ENST00000475036 MTFR1LQ9H019 292 aa23.18■■□□□ 1.3
PSMD6-205ENST00000475036 RRP7AQ9Y3A4 280 aaKnown RBP23.18■■□□□ 1.3
PSMD6-205ENST00000475036 KCNQ3O43525 872 aa23.17■■□□□ 1.3
PSMD6-205ENST00000475036 DNAJC10Q8IXB1 793 aa23.17■■□□□ 1.3
PSMD6-205ENST00000475036 KCPQ6ZWJ8 1503 aa23.17■■□□□ 1.3
PSMD6-205ENST00000475036 VIRMAQ69YN4 1812 aaKnown RBP23.17■■□□□ 1.3
PSMD6-205ENST00000475036 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
PSMD6-205ENST00000475036 RIPK4P57078 832 aa23.16■■□□□ 1.3
PSMD6-205ENST00000475036 ZNF790Q6PG37 636 aa23.16■■□□□ 1.3
PSMD6-205ENST00000475036 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
PSMD6-205ENST00000475036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
PSMD6-205ENST00000475036 TMPOP42166 694 aaKnown RBP23.15■■□□□ 1.3
PSMD6-205ENST00000475036 NEUROD2Q15784 382 aa23.15■■□□□ 1.3
PSMD6-205ENST00000475036 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
PSMD6-205ENST00000475036 PTGER2P43116 358 aa23.14■■□□□ 1.29
PSMD6-205ENST00000475036 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
PSMD6-205ENST00000475036 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
PSMD6-205ENST00000475036 PPP1R1BQ9UD71 204 aaPredicted RBP23.14■■□□□ 1.29
PSMD6-205ENST00000475036 CNTNAP4Q9C0A0 1308 aa23.13■■□□□ 1.29
PSMD6-205ENST00000475036 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
PSMD6-205ENST00000475036 FLAD1Q8NFF5 587 aa23.13■■□□□ 1.29
PSMD6-205ENST00000475036 SLC16A10Q8TF71 515 aa23.13■■□□□ 1.29
PSMD6-205ENST00000475036 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
PSMD6-205ENST00000475036 SSFA2P28290 1259 aa23.12■■□□□ 1.29
PSMD6-205ENST00000475036 TJP1Q07157 1748 aa23.12■■□□□ 1.29
PSMD6-205ENST00000475036 QSER1Q2KHR3 1735 aa23.12■■□□□ 1.29
PSMD6-205ENST00000475036 RTCBQ9Y3I0 505 aaKnown RBP23.12■■□□□ 1.29
PSMD6-205ENST00000475036 ZNF831Q5JPB2 1677 aa23.12■■□□□ 1.29
PSMD6-205ENST00000475036 TAF7Q15545 349 aaPredicted RBP23.11■■□□□ 1.29
PSMD6-205ENST00000475036 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
PSMD6-205ENST00000475036 SIPA1L3O60292 1781 aaPredicted RBP23.11■■□□□ 1.29
PSMD6-205ENST00000475036 CYP19A1P11511 503 aaPredicted RBP23.1■■□□□ 1.29
PSMD6-205ENST00000475036 VSIG10Q8N0Z9 540 aa23.1■■□□□ 1.29
PSMD6-205ENST00000475036 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
PSMD6-205ENST00000475036 SRCAPQ6ZRS2 3230 aa23.09■■□□□ 1.29
PSMD6-205ENST00000475036 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
PSMD6-205ENST00000475036 INTS5Q6P9B9 1019 aaKnown RBP23.09■■□□□ 1.29
PSMD6-205ENST00000475036 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
PSMD6-205ENST00000475036 HEG1Q9ULI3 1381 aa23.09■■□□□ 1.29
PSMD6-205ENST00000475036 COL5A3P25940 1745 aaPredicted RBP23.08■■□□□ 1.29
PSMD6-205ENST00000475036 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
PSMD6-205ENST00000475036 CCDC87Q9NVE4 849 aa23.08■■□□□ 1.29
PSMD6-205ENST00000475036 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.28
PSMD6-205ENST00000475036 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
PSMD6-205ENST00000475036 PNISRQ8TF01 805 aaKnown RBP23.07■■□□□ 1.28
PSMD6-205ENST00000475036 ARHGEF1Q92888 912 aaKnown RBP23.07■■□□□ 1.28
PSMD6-205ENST00000475036 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
PSMD6-205ENST00000475036 UBR2Q8IWV8 1755 aa23.06■■□□□ 1.28
PSMD6-205ENST00000475036 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
PSMD6-205ENST00000475036 APAF1O14727 1248 aa23.06■■□□□ 1.28
PSMD6-205ENST00000475036 CICQ96RK0 1608 aaPredicted RBP23.05■■□□□ 1.28
PSMD6-205ENST00000475036 PRAMEF22A3QJZ6 481 aa23.05■■□□□ 1.28
PSMD6-205ENST00000475036 POLD1P28340 1107 aa23.05■■□□□ 1.28
PSMD6-205ENST00000475036 ARXQ96QS3 562 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms