RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 SBNO1A3KN83 1393 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 PLEKHG5O94827 1062 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-214ENST00000473778 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
C9orf3-214ENST00000473778 NWD1Q149M9 1564 aa13.48□□□□□ -0.25
C9orf3-214ENST00000473778 ZDHHC9Q9Y397 364 aa13.47□□□□□ -0.25
C9orf3-214ENST00000473778 DIP2AQ14689 1571 aa13.47□□□□□ -0.25
C9orf3-214ENST00000473778 NUTM2GQ5VZR2 741 aa13.47□□□□□ -0.25
C9orf3-214ENST00000473778 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
C9orf3-214ENST00000473778 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
C9orf3-214ENST00000473778 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.25
C9orf3-214ENST00000473778 FLIIQ13045 1269 aa13.46□□□□□ -0.25
C9orf3-214ENST00000473778 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
C9orf3-214ENST00000473778 CLCN1P35523 988 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 AMPHP49418 695 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
C9orf3-214ENST00000473778 KLHL40Q2TBA0 621 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 MCTP1Q6DN14 999 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 ISY1Q9ULR0 285 aaKnown RBP13.45□□□□□ -0.26
C9orf3-214ENST00000473778 ERC2O15083 957 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 NGDNQ8NEJ9 315 aaKnown RBP13.45□□□□□ -0.26
C9orf3-214ENST00000473778 IL17REQ8NFR9 667 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 LMBRD1Q9NUN5 540 aa13.45□□□□□ -0.26
C9orf3-214ENST00000473778 DDX49Q9Y6V7 483 aaKnown RBP13.45□□□□□ -0.26
C9orf3-214ENST00000473778 GNAI2P04899 355 aa13.44□□□□□ -0.26
C9orf3-214ENST00000473778 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-214ENST00000473778 IL25Q9H293 177 aa13.44□□□□□ -0.26
C9orf3-214ENST00000473778 PALD1Q9ULE6 856 aa13.44□□□□□ -0.26
C9orf3-214ENST00000473778 HMMRO75330 724 aa13.44□□□□□ -0.26
C9orf3-214ENST00000473778 UNC5CLQ8IV45 518 aa13.44□□□□□ -0.26
C9orf3-214ENST00000473778 REC8O95072 547 aa13.43□□□□□ -0.26
C9orf3-214ENST00000473778 RNF39Q9H2S5 420 aa13.43□□□□□ -0.26
C9orf3-214ENST00000473778 HOXC9P31274 260 aa13.43□□□□□ -0.26
C9orf3-214ENST00000473778 NLRP6P59044 892 aa13.43□□□□□ -0.26
C9orf3-214ENST00000473778 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
C9orf3-214ENST00000473778 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-214ENST00000473778 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-214ENST00000473778 LRRFIP2Q9Y608 721 aaKnown RBP13.42□□□□□ -0.26
C9orf3-214ENST00000473778 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 SLIT1O75093 1534 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 GNAT3A8MTJ3 354 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 ST18O60284 1047 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 CACNA1FO60840 1977 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 MX1P20591 662 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 STK31Q9BXU1 1019 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
C9orf3-214ENST00000473778 IBTKQ9P2D0 1353 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-214ENST00000473778 ESPNB1AK53 854 aa13.41□□□□□ -0.26
C9orf3-214ENST00000473778 NUCB2P80303 420 aa13.41□□□□□ -0.26
C9orf3-214ENST00000473778 CAVIN1Q6NZI2 390 aaKnown RBP13.41□□□□□ -0.26
C9orf3-214ENST00000473778 GPT2Q8TD30 523 aa13.41□□□□□ -0.26
C9orf3-214ENST00000473778 LTV1Q96GA3 475 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-214ENST00000473778 ESYT1Q9BSJ8 1104 aa13.41□□□□□ -0.26
C9orf3-214ENST00000473778 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
C9orf3-214ENST00000473778 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
C9orf3-214ENST00000473778 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
C9orf3-214ENST00000473778 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 RRP9O43818 475 aaKnown RBP13.4□□□□□ -0.26
C9orf3-214ENST00000473778 NEK4P51957 841 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 NSFL1CQ9UNZ2 370 aaKnown RBP13.4□□□□□ -0.26
C9orf3-214ENST00000473778 PTMSP20962 102 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 FOXD4L5Q5VV16 416 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-214ENST00000473778 CCDC30Q5VVM6 783 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 FOXD4L4Q8WXT5 416 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-214ENST00000473778 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 TBX22Q9Y458 520 aa13.4□□□□□ -0.26
C9orf3-214ENST00000473778 CHMLP26374 656 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 ZSCAN23Q3MJ62 389 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 RBM27Q9P2N5 1060 aaKnown RBP13.39□□□□□ -0.27
C9orf3-214ENST00000473778 EID1Q9Y6B2 187 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 MAP3K5Q99683 1374 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 PRPF40AO75400 957 aaKnown RBP13.39□□□□□ -0.27
C9orf3-214ENST00000473778 KCNA6P17658 529 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
C9orf3-214ENST00000473778 IL1RAPL2Q9NP60 686 aa13.39□□□□□ -0.27
C9orf3-214ENST00000473778 NASPP49321 788 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-214ENST00000473778 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
C9orf3-214ENST00000473778 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
C9orf3-214ENST00000473778 GNAI3P08754 354 aa13.38□□□□□ -0.27
C9orf3-214ENST00000473778 ZNF445P59923 1031 aa13.38□□□□□ -0.27
C9orf3-214ENST00000473778 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
C9orf3-214ENST00000473778 LTN1O94822 1766 aa13.38□□□□□ -0.27
C9orf3-214ENST00000473778 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
C9orf3-214ENST00000473778 NCLP19338 710 aaKnown RBP13.37□□□□□ -0.27
C9orf3-214ENST00000473778 STAP2Q9UGK3 403 aa13.37□□□□□ -0.27
C9orf3-214ENST00000473778 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-214ENST00000473778 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-214ENST00000473778 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
C9orf3-214ENST00000473778 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
C9orf3-214ENST00000473778 NUTM1Q86Y26 1132 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 ABTB2Q8N961 1025 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
C9orf3-214ENST00000473778 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms