RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 UBR2Q8IWV8 1755 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 EP400Q96L91 3159 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 ZNF853P0CG23 659 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 GNAI1P63096 354 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 MCM10Q7L590 875 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 RGPD3A6NKT7 1758 aaPredicted RBP20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 RGPD4Q7Z3J3 1758 aa20.97■□□□□ 0.95
PCOLCE-205ENST00000472348 CABP4P57796 275 aa20.96■□□□□ 0.95
PCOLCE-205ENST00000472348 GOLGA2Q08379 1002 aa20.96■□□□□ 0.95
PCOLCE-205ENST00000472348 CICQ96RK0 1608 aaPredicted RBP20.96■□□□□ 0.95
PCOLCE-205ENST00000472348 BTAF1O14981 1849 aa20.95■□□□□ 0.94
PCOLCE-205ENST00000472348 CHL1O00533 1208 aa20.95■□□□□ 0.94
PCOLCE-205ENST00000472348 BCL11BQ9C0K0 894 aaPredicted RBP20.95■□□□□ 0.94
PCOLCE-205ENST00000472348 TMOD3Q9NYL9 352 aa20.95■□□□□ 0.94
PCOLCE-205ENST00000472348 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
PCOLCE-205ENST00000472348 E9PSI1 815 aa20.93■□□□□ 0.94
PCOLCE-205ENST00000472348 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
PCOLCE-205ENST00000472348 NFATC2IPQ8NCF5 419 aa20.93■□□□□ 0.94
PCOLCE-205ENST00000472348 PRIM1P49642 420 aaKnown RBP20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 CCDC125Q86Z20 511 aa20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 MYH16Q9H6N6 1097 aa20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 SOS1Q07889 1333 aaPredicted RBP20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 LY75O60449 1722 aa20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
PCOLCE-205ENST00000472348 PIGBQ92521 554 aa20.91■□□□□ 0.94
PCOLCE-205ENST00000472348 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
PCOLCE-205ENST00000472348 BTBD11A6QL63 1104 aa20.9■□□□□ 0.94
PCOLCE-205ENST00000472348 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
PCOLCE-205ENST00000472348 SLFN5Q08AF3 891 aa20.89■□□□□ 0.93
PCOLCE-205ENST00000472348 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-205ENST00000472348 ZNF790Q6PG37 636 aa20.89■□□□□ 0.93
PCOLCE-205ENST00000472348 THUMPD2Q9BTF0 503 aaKnown RBP20.89■□□□□ 0.93
PCOLCE-205ENST00000472348 HEG1Q9ULI3 1381 aa20.88■□□□□ 0.93
PCOLCE-205ENST00000472348 VSIG10Q8N0Z9 540 aa20.88■□□□□ 0.93
PCOLCE-205ENST00000472348 PLSCR1O15162 318 aa20.87■□□□□ 0.93
PCOLCE-205ENST00000472348 CHMP4AQ9BY43 222 aa20.87■□□□□ 0.93
PCOLCE-205ENST00000472348 SALL2Q9Y467 1007 aaPredicted RBP20.87■□□□□ 0.93
PCOLCE-205ENST00000472348 HOXB7P09629 217 aa20.86■□□□□ 0.93
PCOLCE-205ENST00000472348 TSPYL4Q9UJ04 414 aa20.86■□□□□ 0.93
PCOLCE-205ENST00000472348 KCPQ6ZWJ8 1503 aa20.86■□□□□ 0.93
PCOLCE-205ENST00000472348 KCNQ2O43526 872 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 TRIM37O94972 964 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 CT47B1P0C2W7 299 aaPredicted RBP20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 TTC5Q8N0Z6 440 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 SYTL4Q96C24 671 aaPredicted RBP20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 ACSBG1Q96GR2 724 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 MBIPQ9NS73 344 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 ATG3Q9NT62 314 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 CACNA1FO60840 1977 aa20.85■□□□□ 0.93
PCOLCE-205ENST00000472348 LAMB4A4D0S4 1761 aa20.84■□□□□ 0.93
PCOLCE-205ENST00000472348 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
PCOLCE-205ENST00000472348 FMNL2Q96PY5 1086 aa20.83■□□□□ 0.93
PCOLCE-205ENST00000472348 FANCIQ9NVI1 1328 aa20.82■□□□□ 0.92
PCOLCE-205ENST00000472348 EIF4A1P60842 406 aaKnown RBP20.82■□□□□ 0.92
PCOLCE-205ENST00000472348 DUSP27Q5VZP5 1158 aa20.82■□□□□ 0.92
PCOLCE-205ENST00000472348 TEX13AQ9BXU3 409 aaPredicted RBP20.82■□□□□ 0.92
PCOLCE-205ENST00000472348 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
PCOLCE-205ENST00000472348 BAG6P46379 1132 aa20.81■□□□□ 0.92
PCOLCE-205ENST00000472348 SPINK5Q9NQ38 1064 aaPredicted RBP20.81■□□□□ 0.92
PCOLCE-205ENST00000472348 ASAP1Q9ULH1 1129 aa20.81■□□□□ 0.92
PCOLCE-205ENST00000472348 TAF1LQ8IZX4 1826 aa20.8■□□□□ 0.92
PCOLCE-205ENST00000472348 COL5A3P25940 1745 aaPredicted RBP20.79■□□□□ 0.92
PCOLCE-205ENST00000472348 EN1Q05925 392 aaPredicted RBP20.79■□□□□ 0.92
PCOLCE-205ENST00000472348 SLC27A3Q5K4L6 730 aa20.79■□□□□ 0.92
PCOLCE-205ENST00000472348 C5P01031 1676 aa20.79■□□□□ 0.92
PCOLCE-205ENST00000472348 TJP1Q07157 1748 aa20.78■□□□□ 0.92
PCOLCE-205ENST00000472348 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
PCOLCE-205ENST00000472348 CDCA7LQ96GN5 454 aa20.78■□□□□ 0.92
PCOLCE-205ENST00000472348 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
PCOLCE-205ENST00000472348 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
PCOLCE-205ENST00000472348 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
PCOLCE-205ENST00000472348 SLC39A6Q13433 755 aa20.77■□□□□ 0.92
PCOLCE-205ENST00000472348 MIS18AQ9NYP9 233 aa20.77■□□□□ 0.92
PCOLCE-205ENST00000472348 SENP3-EIF4A1A0A087X0R7 540 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 LOC102724428A0A0B4J2F2 783 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 APBA3O96018 575 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 SIK1P57059 783 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 RREB1Q92766 1687 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 ERBB4Q15303 1308 aa20.76■□□□□ 0.91
PCOLCE-205ENST00000472348 PTF1AQ7RTS3 328 aa20.75■□□□□ 0.91
PCOLCE-205ENST00000472348 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
PCOLCE-205ENST00000472348 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
PCOLCE-205ENST00000472348 KCNQ3O43525 872 aa20.74■□□□□ 0.91
PCOLCE-205ENST00000472348 EZH2Q15910 746 aaKnown RBP20.74■□□□□ 0.91
PCOLCE-205ENST00000472348 EXOSC9Q06265 439 aaKnown RBP20.72■□□□□ 0.91
PCOLCE-205ENST00000472348 TWISTNBQ3B726 338 aaPredicted RBP20.72■□□□□ 0.91
PCOLCE-205ENST00000472348 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 VAMP4O75379 141 aa20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 STARD3NLO95772 234 aa20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 SLC4A9Q96Q91 983 aa20.71■□□□□ 0.91
PCOLCE-205ENST00000472348 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
PCOLCE-205ENST00000472348 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
PCOLCE-205ENST00000472348 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.9
PCOLCE-205ENST00000472348 BRPF1P55201 1214 aaPredicted RBP20.69■□□□□ 0.9
PCOLCE-205ENST00000472348 TXNRD1Q16881 649 aa20.69■□□□□ 0.9
PCOLCE-205ENST00000472348 ALDH1L2Q3SY69 923 aa20.69■□□□□ 0.9
PCOLCE-205ENST00000472348 CCNL1Q9UK58 526 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms