RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 KCNQ2O43526 872 aa16.74■□□□□ 0.27
LINC00888-202ENST00000471496 APBA3O96018 575 aa16.74■□□□□ 0.27
LINC00888-202ENST00000471496 CAMKK2Q96RR4 588 aa16.74■□□□□ 0.27
LINC00888-202ENST00000471496 PLEKHG2Q9H7P9 1386 aa16.74■□□□□ 0.27
LINC00888-202ENST00000471496 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
LINC00888-202ENST00000471496 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
LINC00888-202ENST00000471496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC00888-202ENST00000471496 ITGB4P16144 1822 aa16.72■□□□□ 0.27
LINC00888-202ENST00000471496 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
LINC00888-202ENST00000471496 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
LINC00888-202ENST00000471496 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
LINC00888-202ENST00000471496 EZH2Q15910 746 aaKnown RBP16.72■□□□□ 0.27
LINC00888-202ENST00000471496 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
LINC00888-202ENST00000471496 MAP3K13O43283 966 aa16.71■□□□□ 0.27
LINC00888-202ENST00000471496 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
LINC00888-202ENST00000471496 PLSCR1O15162 318 aa16.69■□□□□ 0.26
LINC00888-202ENST00000471496 NKX1-1Q15270 411 aaPredicted RBP16.69■□□□□ 0.26
LINC00888-202ENST00000471496 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
LINC00888-202ENST00000471496 SPG7Q9UQ90 795 aa16.69■□□□□ 0.26
LINC00888-202ENST00000471496 LHX8Q68G74 356 aa16.68■□□□□ 0.26
LINC00888-202ENST00000471496 ASTLQ6HA08 431 aaPredicted RBP16.68■□□□□ 0.26
LINC00888-202ENST00000471496 HMOX1P09601 288 aa16.67■□□□□ 0.26
LINC00888-202ENST00000471496 PHKG2P15735 406 aa16.67■□□□□ 0.26
LINC00888-202ENST00000471496 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
LINC00888-202ENST00000471496 LY75O60449 1722 aa16.67■□□□□ 0.26
LINC00888-202ENST00000471496 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
LINC00888-202ENST00000471496 GSE1Q14687 1217 aa16.66■□□□□ 0.26
LINC00888-202ENST00000471496 RALBP1Q15311 655 aa16.65■□□□□ 0.26
LINC00888-202ENST00000471496 PLEKHO1Q53GL0 409 aaPredicted RBP16.65■□□□□ 0.26
LINC00888-202ENST00000471496 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
LINC00888-202ENST00000471496 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
LINC00888-202ENST00000471496 AMOTQ4VCS5 1084 aa16.64■□□□□ 0.25
LINC00888-202ENST00000471496 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
LINC00888-202ENST00000471496 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
LINC00888-202ENST00000471496 ATMINO43313 823 aaPredicted RBP16.63■□□□□ 0.25
LINC00888-202ENST00000471496 PCDHB13Q9Y5F0 798 aa16.63■□□□□ 0.25
LINC00888-202ENST00000471496 KDM6AO15550 1401 aaPredicted RBP16.63■□□□□ 0.25
LINC00888-202ENST00000471496 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
LINC00888-202ENST00000471496 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
LINC00888-202ENST00000471496 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
LINC00888-202ENST00000471496 ADAMTS7Q9UKP4 1686 aa16.62■□□□□ 0.25
LINC00888-202ENST00000471496 TIE1P35590 1138 aa16.61■□□□□ 0.25
LINC00888-202ENST00000471496 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
LINC00888-202ENST00000471496 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
LINC00888-202ENST00000471496 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
LINC00888-202ENST00000471496 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
LINC00888-202ENST00000471496 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
LINC00888-202ENST00000471496 MTHFSDQ2M296 383 aaKnown RBP16.6■□□□□ 0.25
LINC00888-202ENST00000471496 MYBBP1AQ9BQG0 1328 aaKnown RBP16.59■□□□□ 0.25
LINC00888-202ENST00000471496 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
LINC00888-202ENST00000471496 PIGBQ92521 554 aa16.59■□□□□ 0.25
LINC00888-202ENST00000471496 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
LINC00888-202ENST00000471496 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
LINC00888-202ENST00000471496 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
LINC00888-202ENST00000471496 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.24
LINC00888-202ENST00000471496 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
LINC00888-202ENST00000471496 TAF1LQ8IZX4 1826 aa16.58■□□□□ 0.24
LINC00888-202ENST00000471496 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
LINC00888-202ENST00000471496 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00888-202ENST00000471496 SLC39A7Q92504 469 aa16.57■□□□□ 0.24
LINC00888-202ENST00000471496 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
LINC00888-202ENST00000471496 HSP90AB1P08238 724 aaKnown RBP16.56■□□□□ 0.24
LINC00888-202ENST00000471496 PRKAR2BP31323 418 aa16.56■□□□□ 0.24
LINC00888-202ENST00000471496 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
LINC00888-202ENST00000471496 C1orf141Q5JVX7 400 aa16.56■□□□□ 0.24
LINC00888-202ENST00000471496 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 FCHSD2O94868 740 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 R3HDM1Q15032 1099 aaKnown RBP16.55■□□□□ 0.24
LINC00888-202ENST00000471496 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 MRC1P22897 1456 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 TUBGCP6Q96RT7 1819 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
LINC00888-202ENST00000471496 C7P10643 843 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 KCNQ4P56696 695 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 C5P01031 1676 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
LINC00888-202ENST00000471496 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 BMP2KQ9NSY1 1161 aaPredicted RBP16.54■□□□□ 0.24
LINC00888-202ENST00000471496 ASAP1Q9ULH1 1129 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
LINC00888-202ENST00000471496 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
LINC00888-202ENST00000471496 QSER1Q2KHR3 1735 aa16.53■□□□□ 0.24
LINC00888-202ENST00000471496 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
LINC00888-202ENST00000471496 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
LINC00888-202ENST00000471496 ZNF831Q5JPB2 1677 aa16.52■□□□□ 0.24
LINC00888-202ENST00000471496 RNMTO43148 476 aaKnown RBP16.52■□□□□ 0.23
LINC00888-202ENST00000471496 NBPF14Q5TI25 921 aa16.52■□□□□ 0.23
LINC00888-202ENST00000471496 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.23
LINC00888-202ENST00000471496 MAP3K5Q99683 1374 aa16.51■□□□□ 0.23
LINC00888-202ENST00000471496 PYGBP11216 843 aa16.51■□□□□ 0.23
LINC00888-202ENST00000471496 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
LINC00888-202ENST00000471496 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
LINC00888-202ENST00000471496 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
LINC00888-202ENST00000471496 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
LINC00888-202ENST00000471496 CABP4P57796 275 aa16.5■□□□□ 0.23
LINC00888-202ENST00000471496 ZNF827Q17R98 1081 aa16.5■□□□□ 0.23
LINC00888-202ENST00000471496 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
LINC00888-202ENST00000471496 CCNL1Q9UK58 526 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms