RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 IFNL2Q8IZJ0 200 aa22.62■■□□□ 1.21
HSPG2-208ENST00000471322 DOT1LQ8TEK3 1739 aa22.62■■□□□ 1.21
HSPG2-208ENST00000471322 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
HSPG2-208ENST00000471322 CAMKK2Q96RR4 588 aa22.6■■□□□ 1.21
HSPG2-208ENST00000471322 NHSQ6T4R5 1651 aa22.6■■□□□ 1.21
HSPG2-208ENST00000471322 CT47B1P0C2W7 299 aaPredicted RBP22.6■■□□□ 1.21
HSPG2-208ENST00000471322 PHACTR3Q96KR7 559 aa22.6■■□□□ 1.21
HSPG2-208ENST00000471322 MTHFSDQ2M296 383 aaKnown RBP22.59■■□□□ 1.21
HSPG2-208ENST00000471322 C1orf141Q5JVX7 400 aa22.59■■□□□ 1.21
HSPG2-208ENST00000471322 MPRIPQ6WCQ1 1025 aa22.59■■□□□ 1.21
HSPG2-208ENST00000471322 NKX1-1Q15270 411 aaPredicted RBP22.57■■□□□ 1.2
HSPG2-208ENST00000471322 TOGARAM1Q9Y4F4 1720 aa22.56■■□□□ 1.2
HSPG2-208ENST00000471322 BTAF1O14981 1849 aa22.56■■□□□ 1.2
HSPG2-208ENST00000471322 PROM2Q8N271 834 aa22.54■■□□□ 1.2
HSPG2-208ENST00000471322 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
HSPG2-208ENST00000471322 PLSCR1O15162 318 aa22.53■■□□□ 1.2
HSPG2-208ENST00000471322 KDM6AO15550 1401 aaPredicted RBP22.53■■□□□ 1.2
HSPG2-208ENST00000471322 PLIN1O60240 522 aa22.53■■□□□ 1.2
HSPG2-208ENST00000471322 KCNQ4P56696 695 aa22.53■■□□□ 1.2
HSPG2-208ENST00000471322 PIGBQ92521 554 aa22.53■■□□□ 1.2
HSPG2-208ENST00000471322 DCAF5Q96JK2 942 aa22.53■■□□□ 1.2
HSPG2-208ENST00000471322 FANCIQ9NVI1 1328 aa22.52■■□□□ 1.2
HSPG2-208ENST00000471322 AKAP4Q5JQC9 854 aa22.52■■□□□ 1.2
HSPG2-208ENST00000471322 LGR6Q9HBX8 967 aa22.52■■□□□ 1.2
HSPG2-208ENST00000471322 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
HSPG2-208ENST00000471322 TXNRD1Q16881 649 aa22.51■■□□□ 1.19
HSPG2-208ENST00000471322 CCDC136Q96JN2 1154 aa22.51■■□□□ 1.19
HSPG2-208ENST00000471322 TMOD3Q9NYL9 352 aa22.51■■□□□ 1.19
HSPG2-208ENST00000471322 B4GALNT3Q6L9W6 998 aa22.5■■□□□ 1.19
HSPG2-208ENST00000471322 EXOC6Q8TAG9 804 aa22.5■■□□□ 1.19
HSPG2-208ENST00000471322 RARSP54136 660 aaKnown RBP22.49■■□□□ 1.19
HSPG2-208ENST00000471322 GNAI1P63096 354 aa22.49■■□□□ 1.19
HSPG2-208ENST00000471322 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
HSPG2-208ENST00000471322 ITGB4P16144 1822 aa22.49■■□□□ 1.19
HSPG2-208ENST00000471322 CABP4P57796 275 aa22.49■■□□□ 1.19
HSPG2-208ENST00000471322 BCAR3O75815 825 aa22.48■■□□□ 1.19
HSPG2-208ENST00000471322 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
HSPG2-208ENST00000471322 PSDA5PKW4 1024 aaPredicted RBP22.47■■□□□ 1.19
HSPG2-208ENST00000471322 PDE3AQ14432 1141 aa22.47■■□□□ 1.19
HSPG2-208ENST00000471322 NFATC2IPQ8NCF5 419 aa22.47■■□□□ 1.19
HSPG2-208ENST00000471322 TSR2Q969E8 191 aaKnown RBP22.47■■□□□ 1.19
HSPG2-208ENST00000471322 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
HSPG2-208ENST00000471322 ERVV-2B6SEH9 535 aa22.46■■□□□ 1.19
HSPG2-208ENST00000471322 ZNF428Q96B54 188 aa22.46■■□□□ 1.19
HSPG2-208ENST00000471322 LRRC4BQ9NT99 713 aa22.46■■□□□ 1.19
HSPG2-208ENST00000471322 GNAT3A8MTJ3 354 aa22.46■■□□□ 1.19
HSPG2-208ENST00000471322 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
HSPG2-208ENST00000471322 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
HSPG2-208ENST00000471322 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
HSPG2-208ENST00000471322 MAP3K5Q99683 1374 aa22.45■■□□□ 1.18
HSPG2-208ENST00000471322 RREB1Q92766 1687 aa22.45■■□□□ 1.18
HSPG2-208ENST00000471322 PALLDQ8WX93 1383 aa22.45■■□□□ 1.18
HSPG2-208ENST00000471322 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
HSPG2-208ENST00000471322 R3HDM1Q15032 1099 aaKnown RBP22.44■■□□□ 1.18
HSPG2-208ENST00000471322 CFAP44Q96MT7 982 aa22.44■■□□□ 1.18
HSPG2-208ENST00000471322 ANO8Q9HCE9 1232 aaPredicted RBP22.44■■□□□ 1.18
HSPG2-208ENST00000471322 NUP188Q5SRE5 1749 aa22.44■■□□□ 1.18
HSPG2-208ENST00000471322 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
HSPG2-208ENST00000471322 RGPD3A6NKT7 1758 aaPredicted RBP22.43■■□□□ 1.18
HSPG2-208ENST00000471322 RGPD4Q7Z3J3 1758 aa22.43■■□□□ 1.18
HSPG2-208ENST00000471322 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
HSPG2-208ENST00000471322 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
HSPG2-208ENST00000471322 IL17REQ8NFR9 667 aa22.42■■□□□ 1.18
HSPG2-208ENST00000471322 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
HSPG2-208ENST00000471322 CCNL1Q9UK58 526 aaPredicted RBP22.42■■□□□ 1.18
HSPG2-208ENST00000471322 HTATSF1O43719 755 aaKnown RBP22.42■■□□□ 1.18
HSPG2-208ENST00000471322 MCM10Q7L590 875 aa22.41■■□□□ 1.18
HSPG2-208ENST00000471322 SLC52A2Q9HAB3 445 aa22.41■■□□□ 1.18
HSPG2-208ENST00000471322 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
HSPG2-208ENST00000471322 SCN11AQ9UI33 1791 aa22.4■■□□□ 1.18
HSPG2-208ENST00000471322 MS4A1P11836 297 aa22.4■■□□□ 1.18
HSPG2-208ENST00000471322 NBPF14Q5TI25 921 aa22.4■■□□□ 1.18
HSPG2-208ENST00000471322 RTF1Q92541 710 aaKnown RBP22.39■■□□□ 1.18
HSPG2-208ENST00000471322 THUMPD2Q9BTF0 503 aaKnown RBP22.39■■□□□ 1.18
HSPG2-208ENST00000471322 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
HSPG2-208ENST00000471322 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
HSPG2-208ENST00000471322 SLC27A3Q5K4L6 730 aa22.39■■□□□ 1.17
HSPG2-208ENST00000471322 SMARCC1Q92922 1105 aaPredicted RBP22.39■■□□□ 1.17
HSPG2-208ENST00000471322 PTCD1O75127 700 aaKnown RBP22.38■■□□□ 1.17
HSPG2-208ENST00000471322 RBM42Q9BTD8 480 aaKnown RBP22.38■■□□□ 1.17
HSPG2-208ENST00000471322 VIRMAQ69YN4 1812 aaKnown RBP22.37■■□□□ 1.17
HSPG2-208ENST00000471322 TEFQ10587 303 aa22.37■■□□□ 1.17
HSPG2-208ENST00000471322 AAMPQ13685 434 aa22.37■■□□□ 1.17
HSPG2-208ENST00000471322 MBIPQ9NS73 344 aa22.37■■□□□ 1.17
HSPG2-208ENST00000471322 LY75O60449 1722 aa22.37■■□□□ 1.17
HSPG2-208ENST00000471322 LOC102724428A0A0B4J2F2 783 aa22.36■■□□□ 1.17
HSPG2-208ENST00000471322 SIK1P57059 783 aa22.36■■□□□ 1.17
HSPG2-208ENST00000471322 ZNF827Q17R98 1081 aa22.36■■□□□ 1.17
HSPG2-208ENST00000471322 FRAT1Q92837 279 aaPredicted RBP22.36■■□□□ 1.17
HSPG2-208ENST00000471322 SMC4Q9NTJ3 1288 aa22.36■■□□□ 1.17
HSPG2-208ENST00000471322 STK32BQ9NY57 414 aa22.35■■□□□ 1.17
HSPG2-208ENST00000471322 CHL1O00533 1208 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 ATP6V1AP38606 617 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 BRPF1P55201 1214 aaPredicted RBP22.34■■□□□ 1.17
HSPG2-208ENST00000471322 ZKSCAN2Q63HK3 967 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 SSH1Q8WYL5 1049 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 SLC4A9Q96Q91 983 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 PDGFDQ9GZP0 370 aaPredicted RBP22.34■■□□□ 1.17
HSPG2-208ENST00000471322 ADAMTS7Q9UKP4 1686 aa22.34■■□□□ 1.17
HSPG2-208ENST00000471322 MRC1P22897 1456 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms