RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, human

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GREB1-208	ENST00000470980	HOXD11	P31277	338 aa	Predicted RBP	12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	EXOSC9	Q06265	439 aa	Known RBP	12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	MCM10	Q7L590	875 aa		12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	PROM2	Q8N271	834 aa		12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	NLRP2	Q9NX02	1062 aa		12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	ERBB3	P21860	1342 aa		12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	RGPD5	Q99666	1765 aa		12.02	□□□□□ -0.49
GREB1-208	ENST00000470980	CASZ1	Q86V15	1759 aa		12.01	□□□□□ -0.49
GREB1-208	ENST00000470980	CT47B1	P0C2W7	299 aa	Predicted RBP	12.01	□□□□□ -0.49
GREB1-208	ENST00000470980	PTF1A	Q7RTS3	328 aa		12.01	□□□□□ -0.49
GREB1-208	ENST00000470980	RGPD2	P0DJD1	1756 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	GNAT3	A8MTJ3	354 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	KCNQ2	O43526	872 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	HTATSF1	O43719	755 aa	Known RBP	12	□□□□□ -0.49
GREB1-208	ENST00000470980	BCAR3	O75815	825 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12	□□□□□ -0.49
GREB1-208	ENST00000470980	CFAP44	Q96MT7	982 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	SPON1	Q9HCB6	807 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	PPP4R2	Q9NY27	417 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	MAP3K5	Q99683	1374 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	TNS2	Q63HR2	1409 aa		12	□□□□□ -0.49
GREB1-208	ENST00000470980	ZNF853	P0CG23	659 aa		11.99	□□□□□ -0.49
GREB1-208	ENST00000470980	CANX	P27824	592 aa	Known RBP	11.99	□□□□□ -0.49
GREB1-208	ENST00000470980	RARS	P54136	660 aa	Known RBP	11.99	□□□□□ -0.49
GREB1-208	ENST00000470980	MBIP	Q9NS73	344 aa		11.99	□□□□□ -0.49
GREB1-208	ENST00000470980	NCAPD2	Q15021	1401 aa		11.99	□□□□□ -0.49
GREB1-208	ENST00000470980	EXOC5	O00471	708 aa		11.98	□□□□□ -0.49
GREB1-208	ENST00000470980	AMOT	Q4VCS5	1084 aa		11.98	□□□□□ -0.49
GREB1-208	ENST00000470980	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.98	□□□□□ -0.49
GREB1-208	ENST00000470980	RAPGEF4	Q8WZA2	1011 aa		11.98	□□□□□ -0.49
GREB1-208	ENST00000470980	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.98	□□□□□ -0.49
GREB1-208	ENST00000470980	TAT	P17735	454 aa	Predicted RBP	11.97	□□□□□ -0.49
GREB1-208	ENST00000470980	RNF216	Q9NWF9	866 aa	Predicted RBP	11.97	□□□□□ -0.49
GREB1-208	ENST00000470980	NHS	Q6T4R5	1651 aa		11.97	□□□□□ -0.49
GREB1-208	ENST00000470980	FAM208A	Q9UK61	1670 aa	Known RBP	11.97	□□□□□ -0.49
GREB1-208	ENST00000470980	CHL1	O00533	1208 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	TXNRD1	Q16881	649 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	C1orf141	Q5JVX7	400 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	EXOC6	Q8TAG9	804 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	FRAT1	Q92837	279 aa	Predicted RBP	11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	BCL2L13	Q9BXK5	485 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	SMC4	Q9NTJ3	1288 aa		11.96	□□□□□ -0.49
GREB1-208	ENST00000470980	AKAP4	Q5JQC9	854 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	C20orf194	Q5TEA3	1177 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	IL17RE	Q8NFR9	667 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	CRBN	Q96SW2	442 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	TSPYL4	Q9UJ04	414 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	PAPPA	Q13219	1627 aa		11.95	□□□□□ -0.5
GREB1-208	ENST00000470980	ELL2	O00472	640 aa	Predicted RBP	11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	IL2RB	P14784	551 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	PTGER2	P43116	358 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	SLC15A2	Q16348	729 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	SSH1	Q8WYL5	1049 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	ZNF428	Q96B54	188 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	MIS18A	Q9NYP9	233 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	SPG7	Q9UQ90	795 aa		11.94	□□□□□ -0.5
GREB1-208	ENST00000470980	TAF7	Q15545	349 aa	Predicted RBP	11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	TWISTNB	Q3B726	338 aa	Predicted RBP	11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	ALDH1L2	Q3SY69	923 aa		11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	B4GALNT3	Q6L9W6	998 aa		11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	C8orf58	Q8NAV2	365 aa		11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.93	□□□□□ -0.5
GREB1-208	ENST00000470980	MEGF6	O75095	1541 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	VAMP4	O75379	141 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	PDE3A	Q14432	1141 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	MPRIP	Q6WCQ1	1025 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	TSPYL6	Q8N831	410 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	CCDC136	Q96JN2	1154 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	SGIP1	Q9BQI5	828 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	LGR6	Q9HBX8	967 aa		11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
GREB1-208	ENST00000470980	TEF	Q10587	303 aa		11.91	□□□□□ -0.5
GREB1-208	ENST00000470980	ZKSCAN2	Q63HK3	967 aa		11.91	□□□□□ -0.5
GREB1-208	ENST00000470980	BABAM1	Q9NWV8	329 aa		11.91	□□□□□ -0.5
GREB1-208	ENST00000470980	STK32B	Q9NY57	414 aa		11.91	□□□□□ -0.5
GREB1-208	ENST00000470980	PLEKHG2	Q9H7P9	1386 aa		11.91	□□□□□ -0.5
GREB1-208	ENST00000470980	KIF16B	Q96L93	1317 aa		11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	IPO8	O15397	1037 aa	Known RBP	11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	RNMT	O43148	476 aa	Known RBP	11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	MS4A1	P11836	297 aa		11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	KRT24	Q2M2I5	525 aa		11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	PANK1	Q8TE04	598 aa		11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	CEMIP	Q8WUJ3	1361 aa		11.9	□□□□□ -0.5
GREB1-208	ENST00000470980	BTAF1	O14981	1849 aa		11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	TCERG1	O14776	1098 aa	Known RBP	11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	IFNL2	Q8IZJ0	200 aa		11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	MTFR1L	Q9H019	292 aa		11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	NOB1	Q9ULX3	412 aa	Known RBP	11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	COL24A1	Q17RW2	1714 aa		11.89	□□□□□ -0.51
GREB1-208	ENST00000470980	PHKG2	P15735	406 aa		11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	FTSJ3	Q8IY81	847 aa	Known RBP	11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	MRPL50	Q8N5N7	158 aa	Known RBP	11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	CLUAP1	Q96AJ1	413 aa		11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	COG6	Q9Y2V7	657 aa		11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	QSER1	Q2KHR3	1735 aa		11.88	□□□□□ -0.51
GREB1-208	ENST00000470980	BTBD11	A6QL63	1104 aa		11.87	□□□□□ -0.51
GREB1-208	ENST00000470980	NPM3	O75607	178 aa	Known RBP	11.87	□□□□□ -0.51
GREB1-208	ENST00000470980	ZBTB7A	O95365	584 aa		11.87	□□□□□ -0.51
GREB1-208	ENST00000470980	HSP90AB1	P08238	724 aa	Known RBP	11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms