RNA–Protein interactions for RNA: ENST00000470904.5

KPNA1-205, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-205ENST00000470904 SPG7Q9UQ90 795 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
KPNA1-205ENST00000470904 PIP4K2AP48426 406 aaPredicted RBP7.6□□□□□ -1.19
KPNA1-205ENST00000470904 SSH1Q8WYL5 1049 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 ASAP1Q9ULH1 1129 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 LRRC37A3O60309 1634 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 KCNQ3O43525 872 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 ONECUT3O60422 494 aaPredicted RBP7.6□□□□□ -1.19
KPNA1-205ENST00000470904 RARSP54136 660 aaKnown RBP7.6□□□□□ -1.19
KPNA1-205ENST00000470904 IFNL2Q8IZJ0 200 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 C8orf58Q8NAV2 365 aa7.6□□□□□ -1.19
KPNA1-205ENST00000470904 OVOS2A0A0G2JMS6 1433 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 KIF24Q5T7B8 1368 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 PCDH11XQ9BZA7 1347 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 PCDH11YQ9BZA8 1340 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 FTSJ3Q8IY81 847 aaKnown RBP7.59□□□□□ -1.19
KPNA1-205ENST00000470904 PELP1Q8IZL8 1130 aaKnown RBP7.59□□□□□ -1.19
KPNA1-205ENST00000470904 IL17REQ8NFR9 667 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 RBM42Q9BTD8 480 aaKnown RBP7.59□□□□□ -1.19
KPNA1-205ENST00000470904 DISP2A7MBM2 1401 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 DLG5Q8TDM6 1919 aa7.59□□□□□ -1.19
KPNA1-205ENST00000470904 PNNQ9H307 717 aaKnown RBP7.59□□□□□ -1.19
KPNA1-205ENST00000470904 ZNF330Q9Y3S2 320 aaPredicted RBP7.59□□□□□ -1.19
KPNA1-205ENST00000470904 RGS3P49796 1198 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 EZH2Q15910 746 aaKnown RBP7.58□□□□□ -1.2
KPNA1-205ENST00000470904 WDR63Q8IWG1 891 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 PIGBQ92521 554 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 NOB1Q9ULX3 412 aaKnown RBP7.58□□□□□ -1.2
KPNA1-205ENST00000470904 TNS2Q63HR2 1409 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 KDRP35968 1356 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 CABP4P57796 275 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 FAM196AQ6ZSG2 479 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 ITPRIPQ8IWB1 547 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 UPF1Q92900 1129 aaKnown RBP eCLIP7.58□□□□□ -1.24e-9■■■■■ 35.6
KPNA1-205ENST00000470904 RGPD1P0DJD0 1748 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 PRAMEF22A3QJZ6 481 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 PSDA5PKW4 1024 aaPredicted RBP7.58□□□□□ -1.2
KPNA1-205ENST00000470904 GNAT3A8MTJ3 354 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
KPNA1-205ENST00000470904 TEFQ10587 303 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 SF3B2Q13435 895 aaKnown RBP7.58□□□□□ -1.2
KPNA1-205ENST00000470904 ARXQ96QS3 562 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 TSPYL4Q9UJ04 414 aa7.58□□□□□ -1.2
KPNA1-205ENST00000470904 SHANK3Q9BYB0 1731 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 TRMT2AQ8IZ69 625 aaKnown RBP7.57□□□□□ -1.2
KPNA1-205ENST00000470904 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.57□□□□□ -1.2
KPNA1-205ENST00000470904 C1orf115Q9H7X2 142 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 THSD7AQ9UPZ6 1657 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 ANXA1P04083 346 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 DOT1LQ8TEK3 1739 aa7.57□□□□□ -1.2
KPNA1-205ENST00000470904 KDM6AO15550 1401 aaPredicted RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 WNK3Q9BYP7 1800 aa7.56□□□□□ -1.2
KPNA1-205ENST00000470904 TWISTNBQ3B726 338 aaPredicted RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 PDGFDQ9GZP0 370 aaPredicted RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 VIRMAQ69YN4 1812 aaKnown RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 RNMTO43148 476 aaKnown RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 AMOTQ4VCS5 1084 aa7.56□□□□□ -1.2
KPNA1-205ENST00000470904 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
KPNA1-205ENST00000470904 SLC4A10Q6U841 1118 aa7.56□□□□□ -1.2
KPNA1-205ENST00000470904 GAS2L2Q8NHY3 880 aa7.56□□□□□ -1.2
KPNA1-205ENST00000470904 PARP4Q9UKK3 1724 aaKnown RBP7.56□□□□□ -1.2
KPNA1-205ENST00000470904 NGEFQ8N5V2 710 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 MAP3K5Q99683 1374 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 ITGB4P16144 1822 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 SBF2Q86WG5 1849 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 APBB1O00213 710 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 PHF14O94880 888 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 TRIM27P14373 513 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 NPM2Q86SE8 214 aaKnown RBP7.55□□□□□ -1.2
KPNA1-205ENST00000470904 DCAF5Q96JK2 942 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 BCL11BQ9C0K0 894 aaPredicted RBP7.55□□□□□ -1.2
KPNA1-205ENST00000470904 LRRC4BQ9NT99 713 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 TOGARAM1Q9Y4F4 1720 aa7.55□□□□□ -1.2
KPNA1-205ENST00000470904 F6X3S4 739 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 GNAI1P63096 354 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 CCDC27Q2M243 656 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 PROM2Q8N271 834 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 ABCC6O95255 1503 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 BTBD11A6QL63 1104 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 MSH5O43196 834 aa7.54□□□□□ -1.2
KPNA1-205ENST00000470904 VAMP4O75379 141 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 IGHDP01880 384 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 ZKSCAN2Q63HK3 967 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 TMEM57Q8N5G2 664 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
KPNA1-205ENST00000470904 CFAP44Q96MT7 982 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 SLC52A2Q9HAB3 445 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 BTAF1O14981 1849 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 SLC4A2P04920 1241 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 LMOD3Q0VAK6 560 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 AMIGO3Q86WK7 504 aa7.53□□□□□ -1.2
KPNA1-205ENST00000470904 DZIP1LQ8IYY4 767 aaKnown RBP7.53□□□□□ -1.2
KPNA1-205ENST00000470904 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms